FFCP PHASE1:Hg19::chr13:26619917..26619921,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:26619917..26619921,-
|short_description=p@chr13:26619917..26619921,-
|description=CAGE_peak_at_chr13:26619917..26619921,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:26619917..26619921,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr13:26619917..26619921,- | |||
|id=chr13:26619917..26619921,- | |||
|ontology_enrichment_celltype=CL:1000507!2.01e-09!12;CL:1000494!2.01e-09!12;CL:1000449!4.26e-08!16;CL:0002322!1.79e-07!5;CL:1000497!6.92e-07!18;CL:0002518!6.92e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.23e-38;10!CL:1000494;1.23e-38;10!CL:1000449;6.15e-32;15!CL:1000497;5.18e-28;17!CL:0002518;5.18e-28;17!CL:0002681;3.72e-24;12!CL:0002584;3.72e-24;12!CL:0000669;1.51e-14;4!CL:0000650;2.80e-13;2!CL:1000500;2.80e-13;2!CL:1000618;2.80e-13;2!CL:1001318;2.80e-13;2!CL:0002173;2.80e-13;2!CL:0000239;3.24e-09;3!CL:1000615;3.24e-09;3!CL:0002306;3.24e-09;3!CL:1000746;2.24e-08;7!CL:1000612;2.24e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.41e-39,10;CL:1000494,8.41e-39,10;CL:1000449,4.15e-32,15;CL:1000497,3.67e-28,17;CL:0002518,3.67e-28,17;CL:0002681,2.63e-24,12;CL:0002584,2.63e-24,12;CL:0000669,1.26e-14,4;CL:0000650,2.49e-13,2;CL:1000500,2.49e-13,2;CL:1000618,2.49e-13,2;CL:1001318,2.49e-13,2;CL:0002173,2.49e-13,2;CL:0000239,2.53e-09,3;CL:1000615,2.53e-09,3;CL:0002306,2.53e-09,3;CL:1000746,1.97e-08,7;CL:1000612,1.97e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!2.01e-09!12;UBERON:0001231!2.01e-09!12;UBERON:0004810!2.01e-09!12;UBERON:0006555!8.49e-09!17;UBERON:0005103!8.49e-09!17;UBERON:0000083!8.49e-09!17;UBERON:0009201!8.49e-09!17;UBERON:0004819!8.49e-09!17;UBERON:0006553!8.49e-09!17;UBERON:0003074!8.49e-09!17;UBERON:0003060!8.49e-09!17;UBERON:0000080!3.93e-08!18;UBERON:0002120!3.93e-08!18;UBERON:0004875!3.93e-08!18;UBERON:0005721!3.93e-08!18;UBERON:0005754!3.93e-08!18;UBERON:0007297!3.93e-08!18;UBERON:0004211!4.26e-08!16;UBERON:0001285!4.26e-08!16;UBERON:0007684!4.26e-08!16;UBERON:0003220!4.26e-08!16;UBERON:0004208!4.26e-08!16;UBERON:0000475!4.89e-07!365;UBERON:0004876!5.20e-07!20;UBERON:0002046!5.58e-07!5;UBERON:0004117!5.58e-07!5;UBERON:0007689!5.58e-07!5;UBERON:0007123!5.58e-07!5;UBERON:0003091!5.58e-07!5;UBERON:0003103!9.50e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.23e-38;10!UBERON:0009773;1.23e-38;10!UBERON:0001231;1.23e-38;10!UBERON:0004810;1.23e-38;10!UBERON:0006555;6.15e-32;15!UBERON:0004819;6.15e-32;15!UBERON:0001285;6.15e-32;15!UBERON:0007684;6.15e-32;15!UBERON:0001225;3.72e-24;12!UBERON:0008987;3.72e-24;12!UBERON:0002113;2.04e-19;24!UBERON:0011143;2.04e-19;24!UBERON:0001851;3.66e-19;15!UBERON:0000353;3.66e-19;15!UBERON:0000489;8.17e-16;29!UBERON:0006554;3.08e-15;30!UBERON:0001008;3.08e-15;30!UBERON:0003567;2.80e-13;2!UBERON:0003838;2.80e-13;2!UBERON:0003586;2.80e-13;2!UBERON:0005169;2.80e-13;2!UBERON:0002321;2.80e-13;2!UBERON:0005215;2.80e-13;2!UBERON:0002303;2.80e-13;2!UBERON:0002319;2.80e-13;2!UBERON:0006853;3.24e-09;3!UBERON:0007685;3.24e-09;3!UBERON:0004134;3.24e-09;3!UBERON:0000074;2.24e-08;7!UBERON:0001229;2.24e-08;7!UBERON:0003891;4.62e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.41e-39,10;UBERON:0004211,4.15e-32,15;UBERON:0009773,4.15e-32,15;UBERON:0001231,4.15e-32,15;UBERON:0001285,4.15e-32,15;UBERON:0007684,4.15e-32,15;UBERON:0004208,4.15e-32,15;UBERON:0006555,5.18e-30,16;UBERON:0004819,5.18e-30,16;UBERON:0001225,2.63e-24,12;UBERON:0008987,2.63e-24,12;UBERON:0001851,2.79e-19,15;UBERON:0000353,2.79e-19,15;UBERON:0002113,6.62e-18,26;UBERON:0003918,6.62e-18,26;UBERON:0011143,6.62e-18,26;UBERON:0005095,6.62e-18,26;UBERON:0007687,6.62e-18,26;UBERON:0000489,8.88e-15,31;UBERON:0003567,2.49e-13,2;UBERON:0003838,2.49e-13,2;UBERON:0003586,2.49e-13,2;UBERON:0005169,2.49e-13,2;UBERON:0002321,2.49e-13,2;UBERON:0005215,2.49e-13,2;UBERON:0002303,2.49e-13,2;UBERON:0002319,2.49e-13,2;UBERON:0006853,2.53e-09,3;UBERON:0007685,2.53e-09,3;UBERON:0004134,2.53e-09,3;UBERON:0006554,3.05e-09,47;UBERON:0001008,5.09e-09,48;UBERON:0010532,1.97e-08,7;UBERON:0000074,1.97e-08,7;UBERON:0001229,1.97e-08,7;UBERON:0001230,1.97e-08,7;UBERON:0003220,1.97e-08,7;UBERON:0005749,1.97e-08,7;UBERON:0004199,1.97e-08,7;UBERON:0004209,1.97e-08,7;UBERON:0004198,1.97e-08,7;UBERON:0005172,7.44e-08,54;UBERON:0005173,7.44e-08,54;UBERON:0005103,1.97e-07,8;UBERON:0000083,1.97e-07,8;UBERON:0009201,1.97e-07,8;UBERON:0006553,1.97e-07,8;UBERON:0003074,1.97e-07,8;UBERON:0003060,1.97e-07,8;UBERON:0003103,2.27e-07,68;UBERON:0003891,4.35e-07,4;UBERON:0002417,6.33e-07,60;UBERON:0000916,6.33e-07,60 | |||
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| ||
|short_description=p@chr13:26619917..26619921,- | |||
}} | }} |
Latest revision as of 15:16, 24 July 2015
Short description: | p@chr13:26619917..26619921, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:26619917..26619921, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.41e-39 | 10 |
nephron tubule epithelial cell | 8.41e-39 | 10 |
epithelial cell of nephron | 4.15e-32 | 15 |
kidney cell | 3.67e-28 | 17 |
kidney epithelial cell | 3.67e-28 | 17 |
kidney cortical cell | 2.63e-24 | 12 |
renal cortical epithelial cell | 2.63e-24 | 12 |
pericyte cell | 1.26e-14 | 4 |
mesangial cell | 2.49e-13 | 2 |
kidney interstitial cell | 2.49e-13 | 2 |
juxtaglomerular complex cell | 2.49e-13 | 2 |
renal interstitial pericyte | 2.49e-13 | 2 |
extraglomerular mesangial cell | 2.49e-13 | 2 |
brush border epithelial cell | 2.53e-09 | 3 |
kidney cortex tubule cell | 2.53e-09 | 3 |
epithelial cell of proximal tubule | 2.53e-09 | 3 |
glomerular cell | 1.97e-08 | 7 |
kidney corpuscule cell | 1.97e-08 | 7 |