FFCP PHASE1:Hg19::chr21:42219120..42219129,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1826 | |EntrezGene=1826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3039 | |HGNC=3039 | ||
|TSSclassifier=strong | |||
|UniProt=O60469 | |UniProt=O60469 | ||
|association_with_transcript=-55bp_to_ENST00000400454_5end | |association_with_transcript=-55bp_to_ENST00000400454_5end | ||
|cluster_id=chr21:42219120..42219129,- | |||
|coexpression_cluster_id=C1260 | |||
|description=CAGE_peak_10_at_DSCAM_5end | |description=CAGE_peak_10_at_DSCAM_5end | ||
|id=chr21:42219120..42219129,- | |id=chr21:42219120..42219129,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.30e-08,3;CL:0000069,1.30e-08,3;CL:0000307,1.30e-08,3;CL:0000377,1.30e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.26e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;1.33e-23;1!DOID:4549;1.33e-23;1!DOID:5861;1.33e-23;1!DOID:6496;1.33e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.07e-23,1;DOID:4549,1.07e-23,1;DOID:5861,1.07e-23,1;DOID:6496,1.07e-23,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002336;3.67e-23;1!UBERON:0011215;3.67e-23;1!UBERON:0001018;3.67e-23;1!UBERON:0002473;3.67e-23;1!UBERON:0005340;3.67e-23;1!UBERON:0003544;3.67e-23;1!UBERON:0005970;3.67e-23;1!UBERON:0002316;3.67e-23;1!UBERON:0001020;3.67e-23;1!UBERON:0002437;3.67e-23;1!UBERON:0000349;1.77e-18;5!UBERON:0002619;1.04e-15;22!UBERON:0002780;2.53e-14;41!UBERON:0001890;2.53e-14;41!UBERON:0000956;5.99e-14;25!UBERON:0000203;5.99e-14;25!UBERON:0001893;7.60e-14;34!UBERON:0001876;2.74e-12;2!UBERON:0001954;2.74e-12;2!UBERON:0005162;2.74e-12;2!UBERON:0000122;2.74e-12;2!UBERON:0003022;2.74e-12;2!UBERON:0002421;2.74e-12;2!UBERON:0002600;2.74e-12;2!UBERON:0002791;1.13e-10;32!UBERON:0001869;1.13e-10;32!UBERON:0001950;4.04e-10;20!UBERON:0000073;5.22e-09;53!UBERON:0002616;5.22e-09;53!UBERON:0002418;8.96e-09;3!UBERON:0004755;8.96e-09;3!UBERON:0002114;1.26e-08;2!UBERON:0003528;9.52e-08;34!UBERON:0002020;9.52e-08;34!UBERON:0002346;6.87e-07;4!UBERON:0000923;6.87e-07;4!UBERON:0010316;6.87e-07;4!UBERON:0005291;6.87e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,5.13e-23,1;UBERON:0011215,5.13e-23,1;UBERON:0001018,5.13e-23,1;UBERON:0002473,5.13e-23,1;UBERON:0005340,5.13e-23,1;UBERON:0003544,5.13e-23,1;UBERON:0005970,5.13e-23,1;UBERON:0002316,5.13e-23,1;UBERON:0001020,5.13e-23,1;UBERON:0002437,5.13e-23,1;UBERON:0000349,1.48e-18,5;UBERON:0001893,7.47e-16,34;UBERON:0002619,1.06e-15,22;UBERON:0000956,6.10e-14,25;UBERON:0000203,6.10e-14,25;UBERON:0002780,3.00e-13,41;UBERON:0001890,3.00e-13,41;UBERON:0003080,3.00e-13,41;UBERON:0006240,3.00e-13,41;UBERON:0001876,2.32e-12,2;UBERON:0001954,2.59e-12,2;UBERON:0003022,2.59e-12,2;UBERON:0002421,2.59e-12,2;UBERON:0002600,2.59e-12,2;UBERON:0005162,3.24e-12,2;UBERON:0000122,3.24e-12,2;UBERON:0002791,4.50e-11,32;UBERON:0001869,4.50e-11,32;UBERON:0003528,1.84e-10,34;UBERON:0002020,1.84e-10,34;UBERON:0000073,2.40e-10,53;UBERON:0002616,2.40e-10,53;UBERON:0001950,4.17e-10,20;UBERON:0001049,8.26e-10,56;UBERON:0005068,8.26e-10,56;UBERON:0006241,8.26e-10,56;UBERON:0007135,8.26e-10,56;UBERON:0002346,4.20e-09,86;UBERON:0003056,4.98e-09,61;UBERON:0002418,8.31e-09,3;UBERON:0004755,8.31e-09,3;UBERON:0002114,1.04e-08,2;UBERON:0000955,5.20e-08,68;UBERON:0006238,5.20e-08,68;UBERON:0001017,9.07e-07,81;UBERON:0003075,9.07e-07,82;UBERON:0007284,9.07e-07,82 | |||
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|short_description=p10@DSCAM | |short_description=p10@DSCAM | ||
}} | }} |
Latest revision as of 12:07, 18 September 2015
Short description: | p10@DSCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DSCAM_5end |
Coexpression cluster: | C1260_neuroectodermal_parietal_occipital_insula_amygdala_extraskeletal_frontal |
Association with transcript: | -55bp_to_ENST00000400454_5end |
EntrezGene: | DSCAM |
HGNC: | 3039 |
UniProt: | O60469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.30e-08 | 3 |
branched duct epithelial cell | 1.30e-08 | 3 |
tracheal epithelial cell | 1.30e-08 | 3 |
tracheoblast | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.07e-23 | 1 |
extraosseous chondrosarcoma | 1.07e-23 | 1 |
myxoid chondrosarcoma | 1.07e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 1.07e-23 | 1 |