FFCP PHASE1:Hg19::chr8:24773140..24773144,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4741 | |EntrezGene=4741 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7734 | |HGNC=7734 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-34bp_to_ENST00000522503_5end | |association_with_transcript=-34bp_to_ENST00000522503_5end | ||
|cluster_id=chr8:24773140..24773144,+ | |||
|coexpression_cluster_id=C261 | |||
|description=CAGE_peak_20_at_NEFM_5end | |description=CAGE_peak_20_at_NEFM_5end | ||
|id=chr8:24773140..24773144,+ | |id=chr8:24773140..24773144,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.62e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.75e-90!57;UBERON:0005068!2.75e-90!57;UBERON:0006241!2.75e-90!57;UBERON:0007135!2.75e-90!57;UBERON:0002616!9.30e-71!59;UBERON:0005743!1.12e-69!86;UBERON:0001017!5.27e-69!82;UBERON:0003075!3.27e-66!86;UBERON:0007284!3.27e-66!86;UBERON:0002780!9.48e-64!41;UBERON:0001890!9.48e-64!41;UBERON:0006240!9.48e-64!41;UBERON:0000955!2.20e-63!69;UBERON:0006238!2.20e-63!69;UBERON:0002346!4.97e-63!90;UBERON:0000073!1.23e-62!94;UBERON:0001016!1.23e-62!94;UBERON:0003080!3.75e-62!42;UBERON:0002020!1.84e-58!34;UBERON:0003528!1.84e-58!34;UBERON:0002619!8.71e-58!22;UBERON:0001869!1.55e-55!32;UBERON:0001893!4.00e-52!34;UBERON:0007023!6.76e-52!115;UBERON:0000956!1.02e-50!25;UBERON:0000203!1.02e-50!25;UBERON:0002791!2.77e-48!33;UBERON:0001950!3.62e-48!20;UBERON:0003056!2.11e-45!61;UBERON:0000033!1.26e-38!123;UBERON:0000153!1.42e-36!129;UBERON:0007811!1.42e-36!129;UBERON:0004121!1.45e-32!169;UBERON:0000200!2.06e-32!6;UBERON:0000924!1.11e-31!173;UBERON:0006601!1.11e-31!173;UBERON:0003076!4.55e-28!15;UBERON:0003057!4.55e-28!15;UBERON:0001871!2.79e-24!7;UBERON:0000025!1.63e-22!194;UBERON:0000349!2.54e-18!5;UBERON:0001872!7.63e-18!5;UBERON:0000988!1.21e-17!3;UBERON:0002771!2.50e-17!3;UBERON:0002298!2.60e-17!8;UBERON:0002240!6.03e-17!3;UBERON:0004111!6.52e-17!241;UBERON:0004733!5.05e-16!12;UBERON:0002028!5.05e-16!12;UBERON:0007277!5.05e-16!12;UBERON:0000483!3.92e-15!309;UBERON:0000119!6.33e-15!312;UBERON:0004732!9.51e-15!13;UBERON:0000477!1.89e-14!286;UBERON:0000475!8.26e-13!365;UBERON:0001894!1.00e-12!7;UBERON:0006222!1.00e-12!7;UBERON:0001954!1.81e-12!2;UBERON:0003022!1.81e-12!2;UBERON:0002421!1.81e-12!2;UBERON:0002600!1.81e-12!2;UBERON:0000064!2.10e-12!219;UBERON:0002148!2.14e-12!2;UBERON:0009662!2.14e-12!2;UBERON:0001876!3.75e-12!2;UBERON:0001870!6.17e-12!2;UBERON:0001897!6.52e-12!2;UBERON:0005174!2.24e-10!5;UBERON:0001137!2.24e-10!5;UBERON:0002680!4.91e-10!9;UBERON:0001895!4.91e-10!9;UBERON:0010092!4.91e-10!9;UBERON:0002308!5.40e-10!9;UBERON:0000125!5.40e-10!9;UBERON:0002420!6.83e-10!9;UBERON:0007245!6.83e-10!9;UBERON:0010009!6.83e-10!9;UBERON:0010011!6.83e-10!9;UBERON:0000454!6.83e-10!9;UBERON:0000481!7.06e-09!347;UBERON:0006331!1.52e-08!3;UBERON:0001896!3.06e-08!3;UBERON:0005290!3.06e-08!3;UBERON:0010096!3.06e-08!3;UBERON:0005383!4.55e-08!3;UBERON:0005382!4.55e-08!3;UBERON:0000062!6.12e-08!511;UBERON:0002702!3.13e-07!1;UBERON:0003112!5.57e-07!1;UBERON:0000032!5.57e-07!1;UBERON:0005253!5.57e-07!1;UBERON:0003128!5.57e-07!1;UBERON:0002241!5.57e-07!1;UBERON:0001703!5.57e-07!1;UBERON:0004761!5.57e-07!1;UBERON:0009617!5.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;2.56e-98;2!UBERON:0001870;4.68e-66;3!UBERON:0000200;9.87e-34;6!UBERON:0002148;4.32e-26;2!UBERON:0006331;4.32e-26;2!UBERON:0009662;4.32e-26;2!UBERON:0001950;5.49e-22;20!UBERON:0002619;3.62e-20;22!UBERON:0003528;2.49e-18;34!UBERON:0002020;2.49e-18;34!UBERON:0000956;5.83e-18;25!UBERON:0000203;5.83e-18;25!UBERON:0000988;6.76e-18;3!UBERON:0002791;6.78e-15;32!UBERON:0001869;6.78e-15;32!UBERON:0001893;2.77e-13;34!UBERON:0002021;3.26e-11;5!UBERON:0002298;1.22e-09;6!UBERON:0002780;1.41e-09;41!UBERON:0001890;1.41e-09;41!UBERON:0000955;3.06e-08;68!UBERON:0000073;2.50e-07;53!UBERON:0002616;2.50e-07;53!UBERON:0002680;7.48e-07;9!UBERON:0000125;7.48e-07;9!UBERON:0002308;7.48e-07;9!UBERON:0001895;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,2.56e-98,2;UBERON:0001870,4.68e-66,3;UBERON:0000200,9.87e-34,6;UBERON:0002148,4.32e-26,2;UBERON:0006331,4.32e-26,2;UBERON:0009662,4.32e-26,2;UBERON:0003528,2.23e-23,34;UBERON:0002020,2.23e-23,34;UBERON:0001950,5.49e-22,20;UBERON:0002619,3.62e-20,22;UBERON:0000956,5.83e-18,25;UBERON:0000203,5.83e-18,25;UBERON:0000988,6.76e-18,3;UBERON:0000073,1.70e-15,53;UBERON:0002616,1.70e-15,53;UBERON:0001049,9.92e-15,56;UBERON:0005068,9.92e-15,56;UBERON:0006241,9.92e-15,56;UBERON:0007135,9.92e-15,56;UBERON:0002791,2.31e-14,32;UBERON:0001869,2.31e-14,32;UBERON:0001893,1.35e-13,34;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0002021,3.26e-11,5;UBERON:0001017,2.17e-10,81;UBERON:0003075,2.17e-10,82;UBERON:0007284,2.17e-10,82;UBERON:0002346,5.98e-10,86;UBERON:0002298,1.22e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0010371,2.22e-08,104;UBERON:0003056,4.61e-08,61;UBERON:0002680,7.48e-07,9;UBERON:0000125,7.48e-07,9;UBERON:0002308,7.48e-07,9;UBERON:0001895,7.48e-07,9;UBERON:0010092,7.48e-07,9;UBERON:0010314,8.99e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,1.1267183763585,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.826747186004736,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.611727596791485,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06852730178481,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.122026264901963,1.1267183763585,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.826747186004736,0.19024743058172,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.611727596791485,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p20@NEFM | |short_description=p20@NEFM | ||
}} | }} |
Latest revision as of 15:39, 17 September 2015
Short description: | p20@NEFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NEFM_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | -34bp_to_ENST00000522503_5end |
EntrezGene: | NEFM |
HGNC: | 7734 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data