FFCP PHASE1:Hg19::chr2:60780871..60780882,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53335 | |EntrezGene=53335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13221 | |HGNC=13221 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-169bp_to_ENST00000359629_5end | |association_with_transcript=-169bp_to_ENST00000359629_5end | ||
|cluster_id=chr2:60780871..60780882,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_16_at_BCL11A_5end | |description=CAGE_peak_16_at_BCL11A_5end | ||
|id=chr2:60780871..60780882,- | |id=chr2:60780871..60780882,- | ||
|ontology_enrichment_celltype=CL:0000540!8.19e-13!6;CL:0000031!8.19e-13!6;CL:0000404!8.19e-13!6;CL:0000047!2.28e-09!8;CL:0000945!4.79e-08!24;CL:0000826!4.79e-08!24;CL:0000784!2.09e-07!3 | |ontology_enrichment_celltype=CL:0000540!8.19e-13!6;CL:0000031!8.19e-13!6;CL:0000404!8.19e-13!6;CL:0000047!2.28e-09!8;CL:0000945!4.79e-08!24;CL:0000826!4.79e-08!24;CL:0000784!2.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.03e-22;6!CL:0000404;5.03e-22;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.03e-22,6;CL:0000031,5.03e-22,6;CL:0000404,5.03e-22,6;CL:0000047,1.08e-16,8 | |||
|ontology_enrichment_development_v019=CL:0000031;5.03e-22;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;1.83e-32;20!UBERON:0002619;1.30e-29;22!UBERON:0000956;3.71e-26;25!UBERON:0000203;3.71e-26;25!UBERON:0002021;5.09e-26;5!UBERON:0002791;2.35e-20;32!UBERON:0001869;2.94e-20;32!UBERON:0001871;9.36e-19;6!UBERON:0001893;5.11e-17;34!UBERON:0003528;1.16e-15;34!UBERON:0002020;1.16e-15;34!UBERON:0002780;6.56e-13;41!UBERON:0001890;6.56e-13;41!UBERON:0000922;2.42e-09;49!UBERON:0002771;2.48e-08;2!UBERON:0000955;8.74e-08;68!UBERON:0001017;5.96e-07;75!UBERON:0000073;8.33e-07;53!UBERON:0002616;8.33e-07;53 | |||
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|short_description=p16@BCL11A | |short_description=p16@BCL11A | ||
}} | }} |
Latest revision as of 20:25, 17 September 2015
Short description: | p16@BCL11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_BCL11A_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -169bp_to_ENST00000359629_5end |
EntrezGene: | BCL11A |
HGNC: | 13221 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.03e-22 | 6 |
neuroblast | 5.03e-22 | 6 |
electrically signaling cell | 5.03e-22 | 6 |
neuronal stem cell | 1.08e-16 | 8 |
Ontology term | p-value | n |
---|---|---|
neocortex | 1.97e-32 | 20 |
regional part of cerebral cortex | 1.39e-29 | 22 |
cerebral cortex | 3.93e-26 | 25 |
pallium | 3.93e-26 | 25 |
occipital lobe | 3.94e-26 | 5 |
regional part of telencephalon | 1.64e-20 | 32 |
cerebral hemisphere | 1.64e-20 | 32 |
central nervous system | 1.49e-19 | 81 |
brain grey matter | 2.57e-19 | 34 |
gray matter | 2.57e-19 | 34 |
telencephalon | 2.57e-19 | 34 |
temporal lobe | 1.23e-18 | 6 |
nervous system | 1.56e-17 | 89 |
regional part of forebrain | 5.02e-16 | 41 |
forebrain | 5.02e-16 | 41 |
anterior neural tube | 5.02e-16 | 41 |
future forebrain | 5.02e-16 | 41 |
regional part of nervous system | 2.32e-12 | 53 |
regional part of brain | 2.32e-12 | 53 |
brain | 2.85e-12 | 68 |
future brain | 2.85e-12 | 68 |
neural tube | 1.10e-11 | 56 |
neural rod | 1.10e-11 | 56 |
future spinal cord | 1.10e-11 | 56 |
neural keel | 1.10e-11 | 56 |
pre-chordal neural plate | 1.06e-10 | 61 |
ectoderm-derived structure | 1.04e-08 | 171 |
ectoderm | 1.04e-08 | 171 |
presumptive ectoderm | 1.04e-08 | 171 |
middle temporal gyrus | 3.08e-08 | 2 |
neural plate | 7.38e-08 | 82 |
presumptive neural plate | 7.38e-08 | 82 |
organ system subdivision | 9.47e-08 | 223 |
neurectoderm | 1.80e-07 | 86 |