FFCP PHASE1:Hg19::chr5:138677515..138677581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51247 | |EntrezGene=51247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17970 | |HGNC=17970 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BPZ3,D6R9Y1 | |UniProt=Q9BPZ3,D6R9Y1 | ||
|association_with_transcript=0bp_to_ENST00000265192,ENST00000510409,ENST00000511381,ENST00000511706,NM_016480,uc003led.2_5end | |association_with_transcript=0bp_to_ENST00000265192,ENST00000510409,ENST00000511381,ENST00000511706,NM_016480,uc003led.2_5end | ||
|cluster_id=chr5:138677515..138677581,+ | |||
|description=CAGE_peak_1_at_PAIP2_5end | |description=CAGE_peak_1_at_PAIP2_5end | ||
|id=chr5:138677515..138677581,+ | |id=chr5:138677515..138677581,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.92e-38!140;CL:0000037!4.69e-36!172;CL:0000566!4.69e-36!172;CL:0002032!2.09e-33!165;CL:0000837!2.09e-33!165;CL:0002031!5.80e-32!124;CL:0002087!1.44e-31!119;CL:0000988!5.93e-29!182;CL:0000766!8.81e-25!76;CL:0000860!3.36e-21!45;CL:0000763!6.68e-21!112;CL:0000049!6.68e-21!112;CL:0000839!1.24e-20!70;CL:0002057!1.60e-20!42;CL:0002194!1.68e-19!63;CL:0000576!1.68e-19!63;CL:0000040!1.68e-19!63;CL:0000559!1.68e-19!63;CL:0000557!2.84e-19!71;CL:0002009!3.94e-19!65;CL:0000542!1.61e-11!53;CL:0000051!1.61e-11!53;CL:0000838!1.63e-11!52;CL:0000791!1.33e-07!18;CL:0000789!1.33e-07!18;CL:0002420!1.33e-07!18;CL:0002419!1.33e-07!18;CL:0000790!1.33e-07!18;CL:0000084!1.67e-07!25;CL:0000827!1.67e-07!25 | |ontology_enrichment_celltype=CL:0000738!1.92e-38!140;CL:0000037!4.69e-36!172;CL:0000566!4.69e-36!172;CL:0002032!2.09e-33!165;CL:0000837!2.09e-33!165;CL:0002031!5.80e-32!124;CL:0002087!1.44e-31!119;CL:0000988!5.93e-29!182;CL:0000766!8.81e-25!76;CL:0000860!3.36e-21!45;CL:0000763!6.68e-21!112;CL:0000049!6.68e-21!112;CL:0000839!1.24e-20!70;CL:0002057!1.60e-20!42;CL:0002194!1.68e-19!63;CL:0000576!1.68e-19!63;CL:0000040!1.68e-19!63;CL:0000559!1.68e-19!63;CL:0000557!2.84e-19!71;CL:0002009!3.94e-19!65;CL:0000542!1.61e-11!53;CL:0000051!1.61e-11!53;CL:0000838!1.63e-11!52;CL:0000791!1.33e-07!18;CL:0000789!1.33e-07!18;CL:0002420!1.33e-07!18;CL:0002419!1.33e-07!18;CL:0000790!1.33e-07!18;CL:0000084!1.67e-07!25;CL:0000827!1.67e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.10e-16;33!CL:0002057;9.10e-16;33!CL:0000576;2.34e-13;48!CL:0000473;5.42e-12;39!CL:0000234;5.42e-12;39!CL:0000766;5.84e-11;69!CL:0002087;6.86e-10;104!CL:0000738;1.18e-08;136!CL:0000791;1.32e-07;18!CL:0000789;1.32e-07;18!CL:0002419;1.32e-07;18!CL:0000084;1.64e-07;25!CL:0000542;1.70e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.59e-37,136;CL:0000037,4.38e-35,168;CL:0002032,1.85e-32,161;CL:0000837,1.85e-32,161;CL:0002031,4.34e-31,120;CL:0002087,1.05e-30,115;CL:0000988,9.46e-29,177;CL:0000766,4.79e-24,72;CL:0000860,1.60e-20,42;CL:0002057,1.60e-20,42;CL:0000763,4.43e-20,108;CL:0000049,4.43e-20,108;CL:0000839,6.77e-20,66;CL:0002194,8.73e-19,59;CL:0000576,8.73e-19,59;CL:0000040,8.73e-19,59;CL:0000559,8.73e-19,59;CL:0000473,8.99e-19,48;CL:0000234,8.99e-19,48;CL:0000557,1.60e-18,67;CL:0002009,2.11e-18,61;CL:0000542,1.61e-11,53;CL:0000051,1.61e-11,53;CL:0000838,1.63e-11,52;CL:0000791,1.33e-07,18;CL:0000789,1.33e-07,18;CL:0002420,1.33e-07,18;CL:0002419,1.33e-07,18;CL:0000790,1.33e-07,18;CL:0000084,1.67e-07,25;CL:0000827,1.67e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;4.81e-15;42!CL:0000790;1.32e-07;18!CL:0000051;1.70e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-24!115;UBERON:0002390!3.26e-19!102;UBERON:0003061!3.26e-19!102;UBERON:0001049!1.37e-18!57;UBERON:0005068!1.37e-18!57;UBERON:0006241!1.37e-18!57;UBERON:0007135!1.37e-18!57;UBERON:0003080!2.52e-16!42;UBERON:0002780!3.03e-16!41;UBERON:0001890!3.03e-16!41;UBERON:0006240!3.03e-16!41;UBERON:0002193!3.11e-16!112;UBERON:0002371!2.17e-15!80;UBERON:0001017!3.58e-15!82;UBERON:0002616!2.48e-14!59;UBERON:0001474!7.31e-14!86;UBERON:0000073!1.07e-13!94;UBERON:0001016!1.07e-13!94;UBERON:0005743!1.26e-13!86;UBERON:0000955!1.66e-13!69;UBERON:0006238!1.66e-13!69;UBERON:0002020!4.74e-13!34;UBERON:0003528!4.74e-13!34;UBERON:0001893!1.91e-12!34;UBERON:0002791!4.35e-12!33;UBERON:0001869!8.93e-12!32;UBERON:0003075!2.91e-11!86;UBERON:0007284!2.91e-11!86;UBERON:0002405!1.30e-10!115;UBERON:0004765!1.46e-10!101;UBERON:0001434!1.46e-10!101;UBERON:0002346!7.42e-10!90;UBERON:0000956!3.68e-09!25;UBERON:0000203!3.68e-09!25;UBERON:0002619!4.42e-09!22;UBERON:0003056!9.83e-09!61;UBERON:0001950!3.29e-08!20 | |ontology_enrichment_uberon=UBERON:0007023!2.20e-24!115;UBERON:0002390!3.26e-19!102;UBERON:0003061!3.26e-19!102;UBERON:0001049!1.37e-18!57;UBERON:0005068!1.37e-18!57;UBERON:0006241!1.37e-18!57;UBERON:0007135!1.37e-18!57;UBERON:0003080!2.52e-16!42;UBERON:0002780!3.03e-16!41;UBERON:0001890!3.03e-16!41;UBERON:0006240!3.03e-16!41;UBERON:0002193!3.11e-16!112;UBERON:0002371!2.17e-15!80;UBERON:0001017!3.58e-15!82;UBERON:0002616!2.48e-14!59;UBERON:0001474!7.31e-14!86;UBERON:0000073!1.07e-13!94;UBERON:0001016!1.07e-13!94;UBERON:0005743!1.26e-13!86;UBERON:0000955!1.66e-13!69;UBERON:0006238!1.66e-13!69;UBERON:0002020!4.74e-13!34;UBERON:0003528!4.74e-13!34;UBERON:0001893!1.91e-12!34;UBERON:0002791!4.35e-12!33;UBERON:0001869!8.93e-12!32;UBERON:0003075!2.91e-11!86;UBERON:0007284!2.91e-11!86;UBERON:0002405!1.30e-10!115;UBERON:0004765!1.46e-10!101;UBERON:0001434!1.46e-10!101;UBERON:0002346!7.42e-10!90;UBERON:0000956!3.68e-09!25;UBERON:0000203!3.68e-09!25;UBERON:0002619!4.42e-09!22;UBERON:0003056!9.83e-09!61;UBERON:0001950!3.29e-08!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.66e-12;41!UBERON:0001890;9.66e-12;41!UBERON:0003528;3.19e-11;34!UBERON:0002020;3.19e-11;34!UBERON:0001893;8.02e-11;34!UBERON:0002791;8.43e-11;32!UBERON:0001869;1.02e-10;32!UBERON:0000073;1.36e-10;53!UBERON:0002616;1.36e-10;53!UBERON:0000956;3.63e-09;25!UBERON:0000203;3.63e-09;25!UBERON:0002619;4.36e-09;22!UBERON:0001950;3.23e-08;20!UBERON:0007023;1.84e-07;114!UBERON:0000955;3.50e-07;68 | |||
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| ||
|short_description=p1@PAIP2 | |short_description=p1@PAIP2 | ||
}} | }} |
Latest revision as of 00:05, 25 September 2015
Short description: | p1@PAIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265192, ENST00000510409, ENST00000511381, ENST00000511706, NM_016480, uc003led.2_5end |
EntrezGene: | PAIP2 |
HGNC: | 17970 |
UniProt: | Q9BPZ3D6R9Y1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.45e-24 | 114 |
neural tube | 1.75e-18 | 56 |
neural rod | 1.75e-18 | 56 |
future spinal cord | 1.75e-18 | 56 |
neural keel | 1.75e-18 | 56 |
hematopoietic system | 2.07e-18 | 98 |
blood island | 2.07e-18 | 98 |
regional part of nervous system | 2.29e-17 | 53 |
regional part of brain | 2.29e-17 | 53 |
regional part of forebrain | 3.03e-16 | 41 |
forebrain | 3.03e-16 | 41 |
anterior neural tube | 3.03e-16 | 41 |
future forebrain | 3.03e-16 | 41 |
hemolymphoid system | 1.88e-15 | 108 |
central nervous system | 4.95e-15 | 81 |
nervous system | 5.32e-15 | 89 |
bone marrow | 1.27e-14 | 76 |
brain | 2.26e-13 | 68 |
future brain | 2.26e-13 | 68 |
bone element | 4.17e-13 | 82 |
brain grey matter | 4.74e-13 | 34 |
gray matter | 4.74e-13 | 34 |
telencephalon | 1.91e-12 | 34 |
immune system | 2.50e-12 | 93 |
regional part of telencephalon | 6.28e-12 | 32 |
cerebral hemisphere | 8.93e-12 | 32 |
skeletal element | 1.69e-11 | 90 |
neural plate | 7.98e-11 | 82 |
presumptive neural plate | 7.98e-11 | 82 |
neurectoderm | 2.02e-09 | 86 |
skeletal system | 2.05e-09 | 100 |
cerebral cortex | 3.68e-09 | 25 |
pallium | 3.68e-09 | 25 |
regional part of cerebral cortex | 4.42e-09 | 22 |
pre-chordal neural plate | 4.82e-09 | 61 |
neocortex | 3.29e-08 | 20 |