FFCP PHASE1:Hg19::chr15:59063406..59063420,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:59063406..59063420,+
|short_description=p4@FAM63B
|description=CAGE_peak_4_at_FAM63B_5end
|association_with_transcript=13bp_to_NM_001040450,NM_001040453,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54629 | |EntrezGene=54629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26954 | |HGNC=26954 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NBR6 | |UniProt=Q8NBR6 | ||
|association_with_transcript=13bp_to_NM_001040450,NM_001040453,uc002afi.2,uc002afj.2,uc002afk.2,uc002afl.2_5end | |||
|cluster_id=chr15:59063406..59063420,+ | |||
|description=CAGE_peak_4_at_FAM63B_5end | |||
|id=chr15:59063406..59063420,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,9.11e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-18!115;UBERON:0001049!4.99e-13!57;UBERON:0005068!4.99e-13!57;UBERON:0006241!4.99e-13!57;UBERON:0007135!4.99e-13!57;UBERON:0002616!4.57e-10!59;UBERON:0003080!2.95e-09!42;UBERON:0000153!4.54e-09!129;UBERON:0007811!4.54e-09!129;UBERON:0003075!5.92e-09!86;UBERON:0007284!5.92e-09!86;UBERON:0000955!6.30e-09!69;UBERON:0006238!6.30e-09!69;UBERON:0002780!8.93e-09!41;UBERON:0001890!8.93e-09!41;UBERON:0006240!8.93e-09!41;UBERON:0004121!1.21e-08!169;UBERON:0001017!2.66e-08!82;UBERON:0000033!3.24e-08!123;UBERON:0005743!1.12e-07!86;UBERON:0000062!1.14e-07!511;UBERON:0000924!1.42e-07!173;UBERON:0006601!1.42e-07!173;UBERON:0002346!2.02e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.24e-08;53!UBERON:0002616;4.24e-08;53!UBERON:0005631;9.07e-08;10!UBERON:0000158;9.07e-08;10!UBERON:0002780;1.58e-07;41!UBERON:0001890;1.58e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.84e-18,114;UBERON:0001049,1.87e-14,56;UBERON:0005068,1.87e-14,56;UBERON:0006241,1.87e-14,56;UBERON:0007135,1.87e-14,56;UBERON:0000073,6.34e-13,53;UBERON:0002616,6.34e-13,53;UBERON:0010371,5.36e-11,104;UBERON:0003075,6.80e-11,82;UBERON:0007284,6.80e-11,82;UBERON:0010314,6.82e-10,132;UBERON:0002346,8.51e-10,86;UBERON:0002780,2.17e-09,41;UBERON:0001890,2.17e-09,41;UBERON:0003080,2.17e-09,41;UBERON:0006240,2.17e-09,41;UBERON:0004121,3.51e-09,171;UBERON:0000924,3.51e-09,171;UBERON:0006601,3.51e-09,171;UBERON:0000955,6.84e-09,68;UBERON:0006238,6.84e-09,68;UBERON:0001017,1.63e-08,81;UBERON:0005631,1.29e-07,14;UBERON:0000158,1.29e-07,14;UBERON:0001016,2.82e-07,89;UBERON:0003528,4.23e-07,34;UBERON:0002020,4.23e-07,34 | |||
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| ||
|short_description=p4@FAM63B | |||
}} | }} |
Latest revision as of 08:05, 18 September 2015
Short description: | p4@FAM63B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM63B_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_001040450, NM_001040453, uc002afi.2, uc002afj.2, uc002afk.2, uc002afl.2_5end |
EntrezGene: | FAM63B |
HGNC: | 26954 |
UniProt: | Q8NBR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 9.11e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 8.84e-18 | 114 |
neural tube | 1.87e-14 | 56 |
neural rod | 1.87e-14 | 56 |
future spinal cord | 1.87e-14 | 56 |
neural keel | 1.87e-14 | 56 |
regional part of nervous system | 6.34e-13 | 53 |
regional part of brain | 6.34e-13 | 53 |
ecto-epithelium | 5.36e-11 | 104 |
neural plate | 6.80e-11 | 82 |
presumptive neural plate | 6.80e-11 | 82 |
structure with developmental contribution from neural crest | 6.82e-10 | 132 |
neurectoderm | 8.51e-10 | 86 |
regional part of forebrain | 2.17e-09 | 41 |
forebrain | 2.17e-09 | 41 |
anterior neural tube | 2.17e-09 | 41 |
future forebrain | 2.17e-09 | 41 |
ectoderm-derived structure | 3.51e-09 | 171 |
ectoderm | 3.51e-09 | 171 |
presumptive ectoderm | 3.51e-09 | 171 |
brain | 6.84e-09 | 68 |
future brain | 6.84e-09 | 68 |
central nervous system | 1.63e-08 | 81 |
extraembryonic membrane | 1.29e-07 | 14 |
membranous layer | 1.29e-07 | 14 |
nervous system | 2.82e-07 | 89 |
brain grey matter | 4.23e-07 | 34 |
gray matter | 4.23e-07 | 34 |