FFCP PHASE1:Hg19::chr8:53162037..53162058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9705 | |EntrezGene=9705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18695 | |HGNC=18695 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_ENST00000518545_5end | |association_with_transcript=-65bp_to_ENST00000518545_5end | ||
|cluster_id=chr8:53162037..53162058,- | |||
|coexpression_cluster_id=C1478 | |||
|description=CAGE_peak_5_at_ST18_5end | |description=CAGE_peak_5_at_ST18_5end | ||
|id=chr8:53162037..53162058,- | |id=chr8:53162037..53162058,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;3.32e-08;1!CL:0000167;6.97e-08;1!CL:0000164;6.97e-08;1!CL:0000502;6.97e-08;1!CL:0000172;6.97e-08;1!CL:0000173;6.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.32e-08,1;CL:0000167,7.45e-08,1;CL:0000164,7.45e-08,1;CL:0000502,7.45e-08,1;CL:0000172,7.45e-08,1;CL:0000173,7.45e-08,1;CL:0002351,7.45e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.69e-20;3!CL:0002351;6.97e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.14e-11;14!DOID:4430;6.97e-08;1!DOID:5409;1.29e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.21e-11,14;DOID:4430,7.45e-08,1;DOID:5409,1.27e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003296;1.43e-15;4!UBERON:0010133;1.43e-15;4!UBERON:0001905;9.01e-15;2!UBERON:0002757;9.01e-15;2!UBERON:0010134;9.01e-15;2!UBERON:0005408;9.01e-15;2!UBERON:0001899;9.01e-15;2!UBERON:0002037;2.03e-10;6!UBERON:0000073;1.07e-09;53!UBERON:0002616;1.07e-09;53!UBERON:0002114;1.64e-09;2!UBERON:0001894;4.12e-09;7!UBERON:0004733;8.09e-09;12!UBERON:0002028;8.09e-09;12!UBERON:0004732;3.79e-08;13!UBERON:0000955;7.41e-08;68!UBERON:0002784;8.25e-08;4!UBERON:0002780;4.05e-07;41!UBERON:0001890;4.05e-07;41!UBERON:0002680;4.27e-07;9!UBERON:0001895;4.27e-07;9!UBERON:0000922;5.31e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.23e-15,4;UBERON:0010133,1.23e-15,4;UBERON:0000073,7.34e-15,53;UBERON:0002616,7.34e-15,53;UBERON:0001905,9.02e-15,2;UBERON:0002757,9.02e-15,2;UBERON:0010134,9.02e-15,2;UBERON:0005408,9.02e-15,2;UBERON:0001899,9.02e-15,2;UBERON:0001049,5.83e-14,56;UBERON:0005068,5.83e-14,56;UBERON:0006241,5.83e-14,56;UBERON:0007135,5.83e-14,56;UBERON:0000955,5.83e-13,68;UBERON:0006238,5.83e-13,68;UBERON:0001017,1.52e-10,81;UBERON:0003075,1.55e-10,82;UBERON:0007284,1.55e-10,82;UBERON:0002037,2.00e-10,6;UBERON:0006215,2.00e-10,6;UBERON:0002346,6.12e-10,86;UBERON:0002114,1.64e-09,2;UBERON:0001016,2.84e-09,89;UBERON:0010371,3.11e-09,104;UBERON:0001894,3.79e-09,7;UBERON:0006222,3.79e-09,7;UBERON:0004733,8.52e-09,12;UBERON:0002028,8.52e-09,12;UBERON:0007277,8.52e-09,12;UBERON:0002780,1.14e-08,41;UBERON:0001890,1.14e-08,41;UBERON:0003080,1.14e-08,41;UBERON:0006240,1.14e-08,41;UBERON:0004732,3.97e-08,13;UBERON:0002784,8.25e-08,4;UBERON:0002680,4.23e-07,9;UBERON:0001895,4.23e-07,9;UBERON:0010092,4.23e-07,9;UBERON:0003076,4.68e-07,15;UBERON:0003057,4.68e-07,15;UBERON:0003056,5.92e-07,61 | |||
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|short_description=p5@ST18 | |short_description=p5@ST18 | ||
}} | }} |
Latest revision as of 11:20, 18 September 2015
Short description: | p5@ST18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ST18_5end |
Coexpression cluster: | C1478_nonsmall_smallcell_small_pineal_cerebellum_argyrophil_gastrointestinal |
Association with transcript: | -65bp_to_ENST00000518545_5end |
EntrezGene: | ST18 |
HGNC: | 18695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.32e-08 | 1 |
peptide hormone secreting cell | 7.45e-08 | 1 |
enteroendocrine cell | 7.45e-08 | 1 |
type D enteroendocrine cell | 7.45e-08 | 1 |
somatostatin secreting cell | 7.45e-08 | 1 |
pancreatic D cell | 7.45e-08 | 1 |
progenitor cell of endocrine pancreas | 7.45e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.21e-11 | 14 |
somatostatinoma | 7.45e-08 | 1 |
lung small cell carcinoma | 1.27e-07 | 4 |