FFCP PHASE1:Hg19::chr10:91005509..91005551,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:91005509..91005551,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:91005509..91005551,- | |description=CAGE_peak_at_chr10:91005509..91005551,- | ||
|id=chr10:91005509..91005551,- | |id=chr10:91005509..91005551,- | ||
|ontology_enrichment_celltype=CL:0002194!1.90e-10!63;CL:0000576!1.90e-10!63;CL:0000040!1.90e-10!63;CL:0000559!1.90e-10!63;CL:0002009!1.02e-09!65;CL:0000839!1.54e-08!70;CL:0000557!3.07e-08!71;CL:0000766!2.44e-07!76 | |ontology_enrichment_celltype=CL:0002194!1.90e-10!63;CL:0000576!1.90e-10!63;CL:0000040!1.90e-10!63;CL:0000559!1.90e-10!63;CL:0002009!1.02e-09!65;CL:0000839!1.54e-08!70;CL:0000557!3.07e-08!71;CL:0000766!2.44e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.26e-52;6!CL:0000840;3.31e-14;5!CL:0000990;1.21e-09;8!CL:0000473;8.54e-09;39!CL:0000234;8.54e-09;39!CL:0000451;5.66e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.11e-52,6;CL:0002194,5.38e-16,59;CL:0000576,5.38e-16,59;CL:0000040,5.38e-16,59;CL:0000559,5.38e-16,59;CL:0002009,2.01e-15,61;CL:0000840,3.32e-14,5;CL:0001029,3.32e-14,5;CL:0000839,3.86e-14,66;CL:0000557,6.62e-14,67;CL:0000766,7.85e-13,72;CL:0000990,1.21e-09,8;CL:0000473,3.02e-08,48;CL:0000234,3.02e-08,48;CL:0000763,5.28e-08,108;CL:0000049,5.28e-08,108;CL:0000451,5.66e-08,10;CL:0002087,2.06e-07,115;CL:0002031,4.93e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.22e-10;1!UBERON:0005795;2.59e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.63e-12;3!DOID:127;1.63e-12;3!DOID:3151;7.22e-10;1!DOID:3149;7.22e-10;1!DOID:0060072;1.31e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.33e-12,3;DOID:127,1.33e-12,3;DOID:3151,8.24e-10,1;DOID:3149,8.24e-10,1;DOID:0060072,1.12e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0004765!9.64e-07!101;UBERON:0001434!9.64e-07!101 | |ontology_enrichment_uberon=UBERON:0004765!9.64e-07!101;UBERON:0001434!9.64e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.22e-10;1!UBERON:0002171;7.22e-10;1!UBERON:0001785;7.22e-10;1!UBERON:0002464;7.22e-10;1!UBERON:0004904;7.22e-10;1!UBERON:0001021;7.22e-10;1!UBERON:0006518;7.22e-10;1!UBERON:0008949;7.22e-10;1!UBERON:0000101;7.22e-10;1!UBERON:0002167;7.22e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.51e-12,76;UBERON:0001474,4.53e-11,82;UBERON:0002171,5.30e-10,1;UBERON:0006518,5.30e-10,1;UBERON:0008949,5.30e-10,1;UBERON:0000101,5.30e-10,1;UBERON:0002167,5.30e-10,1;UBERON:0004765,6.11e-10,90;UBERON:0000941,6.91e-10,1;UBERON:0001785,6.91e-10,1;UBERON:0002464,6.91e-10,1;UBERON:0004904,6.91e-10,1;UBERON:0001021,6.91e-10,1;UBERON:0003902,6.91e-10,1;UBERON:0005425,6.91e-10,1;UBERON:0002405,1.45e-09,93;UBERON:0002390,5.42e-09,98;UBERON:0003061,5.42e-09,98;UBERON:0001434,8.86e-09,100;UBERON:0002193,5.28e-08,108 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0.783556884599516,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0.273748850145768,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.401088894940283,0,0.447830948479849,0.971680998056939,1.03030227053675,0.145398238779565,0.377875943688809,0.727752183563449,0,0.411167888021826,0.619412741790207,0,0.512321413058201,0.47296445977717,0.689491361473237,0,0,0.564727018627814,0,0.224723484445085,0.918251677112708,0,0,0.329851300186716,0.797854630486527,0.852449501065388,0,0,0,0.502497330513487,1.0429658368404,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0.32145117339416,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0,0.370784442784429,12.0082535652233,12.5373410855472,23.9324328933957,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0,0.309977343527296,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0.482022059766964,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,1.47730203652438,5.38209809820247,3.86441021950693,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0.616964956219941,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0.099972991182057,3.64871341923571,5.52482800575339,16.8667151586425,0,0,0,0.289562613335158,0.410952645100767,0,0.112085143993527,0,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.473107245101804,0,0.300946099727719,2.27407504055985,0,0,0,0.173767228936166,0.195801157462741,0.686286847621712,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0,0,0.78494864019923,0,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.92947049429925,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0.586032717087576,0.485442086998054,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0.885741385813839,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.269604531922708,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,1.04135843001079,0,0,0.17472666824203,0.171986032471617,0.19351266257817,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0.171594997861965,0,0,0,0.407712618220842,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0,1.34173875039706,0.157611414598396,0,0,0.35857467866569,0,0.714695326373367,0,0,1.62899880526114,2.5926644736038,0.979762080328227,0,0,0.851940108927109,0.113312091520126,0.146552233678082,0,0,0.79339561045614,0,0,0.533937062838473,0,1.65695622138878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| |phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,2.53299878168311,0,0.783556884599516,0,0,0.655324116390517,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0.273748850145768,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.401088894940283,0,0.447830948479849,0.971680998056939,1.03030227053675,0.145398238779565,0.377875943688809,0.727752183563449,0,0.411167888021826,0.619412741790207,0,0.512321413058201,0.47296445977717,0.689491361473237,0,0,0.564727018627814,0,0.224723484445085,0.918251677112708,0,0,0.329851300186716,0.797854630486527,0.852449501065388,0,0,0,0.502497330513487,1.0429658368404,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0.32145117339416,0.285012743741249,0.59675003159727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0,0.370784442784429,12.0082535652233,12.5373410855472,23.9324328933957,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0.354668382198357,0.560677600142307,0,0,0,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0.204154171254893,0,0.309977343527296,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0.482022059766964,0.330881918197182,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,1.47730203652438,5.38209809820247,3.86441021950693,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,1.71072446022705,0.616964956219941,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0.099972991182057,3.64871341923571,5.52482800575339,16.8667151586425,0,0,0,0.289562613335158,0.410952645100767,0,0.112085143993527,0,0.431255149719035,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.473107245101804,0,0.300946099727719,2.27407504055985,0,0,0,0.173767228936166,0.195801157462741,0.686286847621712,0,0.215714200818617,0.426910231213777,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.601519410909855,0.0920809889358963,0.114814448164607,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.571890581771475,0,0,0,0.78494864019923,0,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.92947049429925,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0.18714054040822,0.586032717087576,0.485442086998054,0,0,0,0,0,0,0,0.111308705022906,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0.885741385813839,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.153900517007594,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0.269604531922708,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,1.04135843001079,0,0,0.17472666824203,0.171986032471617,0.19351266257817,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0.171594997861965,0,0,0,0.407712618220842,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0.408610218334727,0,0,0,0,0,0,1.34173875039706,0.157611414598396,0,0,0.35857467866569,0,0.714695326373367,0,0,1.62899880526114,2.5926644736038,0.979762080328227,0,0,0.851940108927109,0.113312091520126,0.146552233678082,0,0,0.79339561045614,0,0,0.533937062838473,0,1.65695622138878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| ||
|short_description=p@chr10:91005509..91005551,- | |short_description=p@chr10:91005509..91005551,- | ||
}} | }} |
Latest revision as of 16:35, 23 July 2015
Short description: | p@chr10:91005509..91005551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:91005509..91005551, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.11e-52 | 6 |
monopoietic cell | 5.38e-16 | 59 |
monocyte | 5.38e-16 | 59 |
monoblast | 5.38e-16 | 59 |
promonocyte | 5.38e-16 | 59 |
macrophage dendritic cell progenitor | 2.01e-15 | 61 |
immature conventional dendritic cell | 3.32e-14 | 5 |
common dendritic progenitor | 3.32e-14 | 5 |
myeloid lineage restricted progenitor cell | 3.86e-14 | 66 |
granulocyte monocyte progenitor cell | 6.62e-14 | 67 |
myeloid leukocyte | 7.85e-13 | 72 |
conventional dendritic cell | 1.21e-09 | 8 |
defensive cell | 3.02e-08 | 48 |
phagocyte | 3.02e-08 | 48 |
myeloid cell | 5.28e-08 | 108 |
common myeloid progenitor | 5.28e-08 | 108 |
dendritic cell | 5.66e-08 | 10 |
nongranular leukocyte | 2.06e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 4.93e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.51e-12 | 76 |
bone element | 4.53e-11 | 82 |
lower lobe of right lung | 5.30e-10 | 1 |
right lung lobe | 5.30e-10 | 1 |
lower lobe of lung | 5.30e-10 | 1 |
lobe of lung | 5.30e-10 | 1 |
right lung | 5.30e-10 | 1 |
skeletal element | 6.11e-10 | 90 |
cranial nerve II | 6.91e-10 | 1 |
cranial nerve | 6.91e-10 | 1 |
nerve trunk | 6.91e-10 | 1 |
nerve connecting eye with brain | 6.91e-10 | 1 |
nerve | 6.91e-10 | 1 |
retinal neural layer | 6.91e-10 | 1 |
presumptive neural retina | 6.91e-10 | 1 |
immune system | 1.45e-09 | 93 |
hematopoietic system | 5.42e-09 | 98 |
blood island | 5.42e-09 | 98 |
skeletal system | 8.86e-09 | 100 |
hemolymphoid system | 5.28e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.33e-12 | 3 |
leiomyoma | 1.33e-12 | 3 |
skin squamous cell carcinoma | 8.24e-10 | 1 |
keratoacanthoma | 8.24e-10 | 1 |
benign neoplasm | 1.12e-09 | 4 |