FFCP PHASE1:Hg19::chr8:41121332..41121346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:41121332..41121346,- | |||
|coexpression_cluster_id=C863 | |||
|description=CAGE_peak_at_chr8:41121332..41121346,- | |description=CAGE_peak_at_chr8:41121332..41121346,- | ||
|id=chr8:41121332..41121346,- | |id=chr8:41121332..41121346,- | ||
|ontology_enrichment_celltype=CL:0000055!7.20e-08!180;CL:0002334!8.69e-07!12 | |ontology_enrichment_celltype=CL:0000055!7.20e-08!180;CL:0002334!8.69e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.42e-20;3!CL:0000067;2.42e-20;3!CL:0005012;2.42e-20;3!CL:0002304;2.42e-20;3!CL:0002541;1.62e-09;3!CL:0002616;5.57e-08;1!CL:0000511;1.85e-07;1!CL:0002625;1.85e-07;1!CL:0000342;1.85e-07;1!CL:0002565;1.85e-07;1!CL:0002581;1.85e-07;1!CL:0000216;1.85e-07;1!CL:0002591;1.85e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.28e-20,3;CL:0000067,2.28e-20,3;CL:0005012,2.28e-20,3;CL:0002304,2.28e-20,3;CL:0002541,1.73e-09,3;CL:0002616,5.58e-08,1;CL:0000511,1.48e-07,1;CL:0002625,1.48e-07,1;CL:0000216,1.48e-07,1;CL:0002581,1.58e-07,1;CL:0000342,2.31e-07,1;CL:0002565,2.31e-07,1;CL:0002591,2.63e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.86e-10;10!UBERON:0010227;8.83e-08;1!UBERON:0006298;1.85e-07;1!UBERON:0003099;1.85e-07;1!UBERON:0003852;1.85e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;3.69e-20;3!DOID:127;3.69e-20;3!DOID:0060072;2.91e-15;4!DOID:3112;1.85e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.43e-20,3;DOID:127,2.43e-20,3;DOID:0060072,2.14e-15,4;DOID:3112,2.47e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.59e-11!11;UBERON:0005156!3.59e-09!59;UBERON:0000990!3.59e-09!59;UBERON:0000020!2.87e-08!23;UBERON:0003937!8.38e-08!12;UBERON:0005399!8.38e-08!12;UBERON:0001032!9.30e-08!24;UBERON:0004456!9.30e-08!24;UBERON:0000468!1.12e-07!659;UBERON:0000970!2.48e-07!20;UBERON:0001456!6.31e-07!21;UBERON:0000488!6.56e-07!4;UBERON:0002104!7.93e-07!21;UBERON:0002367!8.83e-07!11;UBERON:0010147!8.83e-07!11;UBERON:0009846!8.83e-07!11;UBERON:0003353!8.83e-07!11;UBERON:0004902!8.83e-07!11;UBERON:0003820!8.83e-07!11;UBERON:0009847!8.83e-07!11;UBERON:0005085!8.99e-07!29 | |ontology_enrichment_uberon=UBERON:0007625!1.59e-11!11;UBERON:0005156!3.59e-09!59;UBERON:0000990!3.59e-09!59;UBERON:0000020!2.87e-08!23;UBERON:0003937!8.38e-08!12;UBERON:0005399!8.38e-08!12;UBERON:0001032!9.30e-08!24;UBERON:0004456!9.30e-08!24;UBERON:0000468!1.12e-07!659;UBERON:0000970!2.48e-07!20;UBERON:0001456!6.31e-07!21;UBERON:0000488!6.56e-07!4;UBERON:0002104!7.93e-07!21;UBERON:0002367!8.83e-07!11;UBERON:0010147!8.83e-07!11;UBERON:0009846!8.83e-07!11;UBERON:0003353!8.83e-07!11;UBERON:0004902!8.83e-07!11;UBERON:0003820!8.83e-07!11;UBERON:0009847!8.83e-07!11;UBERON:0005085!8.99e-07!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;4.66e-26;4!UBERON:0007625;2.00e-20;11!UBERON:0001778;2.42e-20;3!UBERON:0001775;2.42e-20;3!UBERON:0002203;1.90e-17;6!UBERON:0001768;1.90e-17;6!UBERON:0002200;1.90e-17;6!UBERON:0001456;5.52e-14;21!UBERON:0005406;9.50e-14;2!UBERON:0000019;1.32e-11;19!UBERON:0000047;1.32e-11;19!UBERON:0004088;1.32e-11;19!UBERON:0010230;1.32e-11;19!UBERON:0001801;2.35e-11;14!UBERON:0000970;5.36e-11;20!UBERON:0002104;1.90e-10;21!UBERON:0006876;1.40e-09;11!UBERON:0003124;1.62e-09;3!UBERON:0000920;1.62e-09;3!UBERON:0000020;1.72e-09;23!UBERON:0001032;4.53e-09;24!UBERON:0004456;4.53e-09;24!UBERON:0010371;4.88e-09;31!UBERON:0002079;8.83e-08;1!UBERON:0005795;1.85e-07;1!UBERON:0001736;1.85e-07;1!UBERON:0001136;1.85e-07;1!UBERON:0001343;1.85e-07;1!UBERON:0005705;1.85e-07;1!UBERON:0008193;1.85e-07;1!UBERON:0010912;1.85e-07;1!UBERON:0002514;1.85e-07;1!UBERON:0003457;1.85e-07;1!UBERON:0008907;1.85e-07;1!UBERON:0008001;1.85e-07;1!UBERON:0007213;1.85e-07;1!UBERON:0009891;1.85e-07;1!UBERON:0007914;1.85e-07;1!UBERON:0004910;1.85e-07;1!UBERON:0007375;1.85e-07;1!UBERON:0003323;1.85e-07;1!UBERON:0010258;1.85e-07;1!UBERON:0005253;1.85e-07;1!UBERON:0007842;1.85e-07;1!UBERON:0002506;1.85e-07;1!UBERON:0004813;1.85e-07;1!UBERON:0002397;1.85e-07;1!UBERON:0003113;1.85e-07;1!UBERON:0003277;1.85e-07;1!UBERON:0001769;1.85e-07;1!UBERON:0001709;1.85e-07;1!UBERON:0002244;1.85e-07;1!UBERON:0005620;1.85e-07;1!UBERON:0010364;1.85e-07;1!UBERON:0004288;1.85e-07;1 | |||
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| ||
|short_description=p@chr8:41121332..41121346,- | |short_description=p@chr8:41121332..41121346,- | ||
}} | }} |
Latest revision as of 18:22, 31 July 2015
Short description: | p@chr8:41121332..41121346, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:41121332..41121346, - |
Coexpression cluster: | C863_leiomyoma_Smooth_Ciliary_Lens_chorionic_Amniotic_Iris |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.28e-20 | 3 |
ciliated epithelial cell | 2.28e-20 | 3 |
multi-ciliated epithelial cell | 2.28e-20 | 3 |
non-pigmented ciliary epithelial cell | 2.28e-20 | 3 |
chorionic membrane mesenchymal stem cell | 1.73e-09 | 3 |
perirenal adipocyte cell | 5.58e-08 | 1 |
androgen binding protein secreting cell | 1.48e-07 | 1 |
seminiferous tubule epithelial cell | 1.48e-07 | 1 |
Sertoli cell | 1.48e-07 | 1 |
perirenal preadipocyte | 1.58e-07 | 1 |
pigment cell (sensu Vertebrata) | 2.31e-07 | 1 |
iris pigment epithelial cell | 2.31e-07 | 1 |
smooth muscle cell of the pulmonary artery | 2.63e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.43e-20 | 3 |