FFCP PHASE1:Hg19::chr12:56473939..56473994,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2065 | |EntrezGene=2065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3431 | |HGNC=3431 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRI5,B4DGQ7 | |UniProt=F8VRI5,B4DGQ7 | ||
|association_with_transcript=0bp_to_ENST00000450146,ENST00000546884,ENST00000550869,ENST00000551085,ENST00000551242,uc010sqb.1_5end | |association_with_transcript=0bp_to_ENST00000450146,ENST00000546884,ENST00000550869,ENST00000551085,ENST00000551242,uc010sqb.1_5end | ||
|cluster_id=chr12:56473939..56473994,+ | |||
|coexpression_cluster_id=C3299 | |coexpression_cluster_id=C3299 | ||
|description=CAGE_peak_1_at_ERBB3_5end | |description=CAGE_peak_1_at_ERBB3_5end | ||
|id=chr12:56473939..56473994,+ | |id=chr12:56473939..56473994,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.38e-15!254;CL:0000223!3.07e-10!59;CL:0002076!8.21e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.38e-15!254;CL:0000223!3.07e-10!59;CL:0002076!8.21e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.01e-14,253;CL:0000223,3.34e-11,58;CL:0002076,2.38e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.77e-07;82!UBERON:0002532;4.54e-07;206!UBERON:0010316;4.54e-07;206 | |||
|ontology_enrichment_disease=DOID:305!4.64e-17!106;DOID:0050687!2.61e-13!143;DOID:299!2.09e-08!25 | |ontology_enrichment_disease=DOID:305!4.64e-17!106;DOID:0050687!2.61e-13!143;DOID:299!2.09e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.73e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.00e-14,106;DOID:0050687,8.95e-11,143;DOID:299,1.79e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.97e-28!115;UBERON:0004119!3.05e-18!169;UBERON:0000925!3.05e-18!169;UBERON:0006595!3.05e-18!169;UBERON:0001049!4.24e-16!57;UBERON:0005068!4.24e-16!57;UBERON:0006241!4.24e-16!57;UBERON:0007135!4.24e-16!57;UBERON:0001007!7.82e-16!155;UBERON:0001555!7.82e-16!155;UBERON:0007026!7.82e-16!155;UBERON:0004921!3.08e-15!129;UBERON:0004185!3.08e-15!129;UBERON:0000481!5.10e-15!347;UBERON:0000062!1.24e-13!511;UBERON:0002616!2.97e-13!59;UBERON:0000077!3.43e-13!130;UBERON:0001017!7.35e-13!82;UBERON:0003080!8.61e-13!42;UBERON:0000064!1.19e-12!219;UBERON:0005743!1.54e-12!86;UBERON:0002780!1.71e-12!41;UBERON:0001890!1.71e-12!41;UBERON:0006240!1.71e-12!41;UBERON:0000475!3.07e-12!365;UBERON:0000955!1.27e-11!69;UBERON:0006238!1.27e-11!69;UBERON:0004121!1.35e-11!169;UBERON:0000466!3.43e-11!126;UBERON:0000073!8.87e-11!94;UBERON:0001016!8.87e-11!94;UBERON:0000924!1.10e-10!173;UBERON:0006601!1.10e-10!173;UBERON:0001893!1.79e-10!34;UBERON:0002020!2.55e-10!34;UBERON:0003528!2.55e-10!34;UBERON:0000153!3.84e-10!129;UBERON:0007811!3.84e-10!129;UBERON:0002791!4.73e-10!33;UBERON:0001041!6.73e-10!98;UBERON:0003075!6.99e-10!86;UBERON:0007284!6.99e-10!86;UBERON:0000033!8.72e-10!123;UBERON:0005911!1.12e-09!82;UBERON:0001869!2.62e-09!32;UBERON:0004111!3.80e-09!241;UBERON:0000483!5.32e-09!309;UBERON:0005177!7.05e-09!107;UBERON:0000119!9.27e-09!312;UBERON:0002346!1.09e-08!90;UBERON:0002619!1.30e-08!22;UBERON:0000922!2.97e-08!612;UBERON:0000468!3.02e-08!659;UBERON:0000477!4.65e-08!286;UBERON:0001950!6.59e-08!20;UBERON:0000464!1.11e-07!104;UBERON:0003056!2.27e-07!61;UBERON:0001004!4.48e-07!72 | |ontology_enrichment_uberon=UBERON:0007023!8.97e-28!115;UBERON:0004119!3.05e-18!169;UBERON:0000925!3.05e-18!169;UBERON:0006595!3.05e-18!169;UBERON:0001049!4.24e-16!57;UBERON:0005068!4.24e-16!57;UBERON:0006241!4.24e-16!57;UBERON:0007135!4.24e-16!57;UBERON:0001007!7.82e-16!155;UBERON:0001555!7.82e-16!155;UBERON:0007026!7.82e-16!155;UBERON:0004921!3.08e-15!129;UBERON:0004185!3.08e-15!129;UBERON:0000481!5.10e-15!347;UBERON:0000062!1.24e-13!511;UBERON:0002616!2.97e-13!59;UBERON:0000077!3.43e-13!130;UBERON:0001017!7.35e-13!82;UBERON:0003080!8.61e-13!42;UBERON:0000064!1.19e-12!219;UBERON:0005743!1.54e-12!86;UBERON:0002780!1.71e-12!41;UBERON:0001890!1.71e-12!41;UBERON:0006240!1.71e-12!41;UBERON:0000475!3.07e-12!365;UBERON:0000955!1.27e-11!69;UBERON:0006238!1.27e-11!69;UBERON:0004121!1.35e-11!169;UBERON:0000466!3.43e-11!126;UBERON:0000073!8.87e-11!94;UBERON:0001016!8.87e-11!94;UBERON:0000924!1.10e-10!173;UBERON:0006601!1.10e-10!173;UBERON:0001893!1.79e-10!34;UBERON:0002020!2.55e-10!34;UBERON:0003528!2.55e-10!34;UBERON:0000153!3.84e-10!129;UBERON:0007811!3.84e-10!129;UBERON:0002791!4.73e-10!33;UBERON:0001041!6.73e-10!98;UBERON:0003075!6.99e-10!86;UBERON:0007284!6.99e-10!86;UBERON:0000033!8.72e-10!123;UBERON:0005911!1.12e-09!82;UBERON:0001869!2.62e-09!32;UBERON:0004111!3.80e-09!241;UBERON:0000483!5.32e-09!309;UBERON:0005177!7.05e-09!107;UBERON:0000119!9.27e-09!312;UBERON:0002346!1.09e-08!90;UBERON:0002619!1.30e-08!22;UBERON:0000922!2.97e-08!612;UBERON:0000468!3.02e-08!659;UBERON:0000477!4.65e-08!286;UBERON:0001950!6.59e-08!20;UBERON:0000464!1.11e-07!104;UBERON:0003056!2.27e-07!61;UBERON:0001004!4.48e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.76e-10;34!UBERON:0002780;2.95e-10;41!UBERON:0001890;2.95e-10;41!UBERON:0003528;7.25e-10;34!UBERON:0002020;7.25e-10;34!UBERON:0002791;1.32e-09;32!UBERON:0001869;1.79e-09;32!UBERON:0000073;3.25e-09;53!UBERON:0002616;3.25e-09;53!UBERON:0002619;4.86e-09;22!UBERON:0007023;9.46e-09;114!UBERON:0001950;3.32e-08;20!UBERON:0004921;7.12e-08;33!UBERON:0000956;3.37e-07;25!UBERON:0000203;3.37e-07;25!UBERON:0005409;9.65e-07;22 | |||
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| ||
|short_description=p1@ERBB3 | |short_description=p1@ERBB3 | ||
}} | }} |
Latest revision as of 09:37, 19 September 2015
Short description: | p1@ERBB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ERBB3_5end |
Coexpression cluster: | C3299_serous_signet_skeletal_optic_colon_breast_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000450146, ENST00000546884, ENST00000550869, ENST00000551085, ENST00000551242, uc010sqb.1_5end |
EntrezGene: | ERBB3 |
HGNC: | 3431 |
UniProt: | F8VRI5B4DGQ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.01e-14 | 253 |
endodermal cell | 3.34e-11 | 58 |
endo-epithelial cell | 2.38e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.00e-14 | 106 |
cell type cancer | 8.95e-11 | 143 |
adenocarcinoma | 1.79e-08 | 25 |