FFCP PHASE1:Hg19::chr17:46675558..46675577,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3216 | |EntrezGene=3216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |HGNC=5117 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |association_with_transcript=-46bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | ||
|cluster_id=chr17:46675558..46675577,- | |||
|coexpression_cluster_id=C3645 | |coexpression_cluster_id=C3645 | ||
|description=CAGE_peak_2_at_HOXB6_5end | |description=CAGE_peak_2_at_HOXB6_5end | ||
|id=chr17:46675558..46675577,- | |id=chr17:46675558..46675577,- | ||
|ontology_enrichment_celltype=CL:1000449!4.07e-13!16;CL:1000497!3.22e-12!18;CL:0002518!3.22e-12!18;CL:0002681!5.95e-11!13;CL:0002584!5.95e-11!13;CL:1000507!3.14e-10!12;CL:1000494!3.14e-10!12;CL:0000222!1.35e-09!119 | |ontology_enrichment_celltype=CL:1000449!4.07e-13!16;CL:1000497!3.22e-12!18;CL:0002518!3.22e-12!18;CL:0002681!5.95e-11!13;CL:0002584!5.95e-11!13;CL:1000507!3.14e-10!12;CL:1000494!3.14e-10!12;CL:0000222!1.35e-09!119 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.00e-18;15!CL:1000497;2.60e-17;17!CL:0002518;2.60e-17;17!CL:0002681;6.73e-15;12!CL:0002584;6.73e-15;12!CL:1000507;1.52e-12;10!CL:1000494;1.52e-12;10!CL:1000746;4.36e-09;7!CL:1000612;4.36e-09;7!CL:0002188;2.47e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.97e-18,15;CL:1000497,2.67e-17,17;CL:0002518,2.67e-17,17;CL:0002681,6.71e-15,12;CL:0002584,6.71e-15,12;CL:1000507,1.45e-12,10;CL:1000494,1.45e-12,10;CL:1000746,4.16e-09,7;CL:1000612,4.16e-09,7;CL:0002188,2.57e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000489;3.83e-20;29!UBERON:0006555;3.00e-18;15!UBERON:0004819;3.00e-18;15!UBERON:0001285;3.00e-18;15!UBERON:0007684;3.00e-18;15!UBERON:0002113;7.23e-18;24!UBERON:0011143;7.23e-18;24!UBERON:0006554;7.52e-16;30!UBERON:0001008;7.52e-16;30!UBERON:0000353;3.33e-15;15!UBERON:0001225;6.73e-15;12!UBERON:0008987;6.73e-15;12!UBERON:0004211;1.52e-12;10!UBERON:0009773;1.52e-12;10!UBERON:0001231;1.52e-12;10!UBERON:0004810;1.52e-12;10!UBERON:0001851;3.89e-11;15!UBERON:0000074;4.36e-09;7!UBERON:0001229;4.36e-09;7!UBERON:0002417;1.15e-08;58!UBERON:0000916;1.15e-08;58!UBERON:0005172;1.36e-07;52!UBERON:0005173;1.36e-07;52!UBERON:0011135;2.65e-07;5!UBERON:0002216;2.65e-07;5!UBERON:0011134;2.65e-07;5!UBERON:0002209;2.65e-07;5!UBERON:0002213;2.65e-07;5!UBERON:0007844;2.65e-07;5!UBERON:0011138;2.65e-07;5!UBERON:0001130;2.65e-07;5!UBERON:0001066;2.65e-07;5!UBERON:0001468;2.65e-07;5 | |||
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| ||
|short_description=p2@HOXB6 | |short_description=p2@HOXB6 | ||
}} | }} |
Latest revision as of 07:22, 25 September 2015
Short description: | p2@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOXB6_5end |
Coexpression cluster: | C3645_ductus_seminal_alveolar_endometrial_Smooth_small_nonsmall |
Association with transcript: | -46bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.97e-18 | 15 |
kidney cell | 2.67e-17 | 17 |
kidney epithelial cell | 2.67e-17 | 17 |
kidney cortical cell | 6.71e-15 | 12 |
renal cortical epithelial cell | 6.71e-15 | 12 |
kidney tubule cell | 1.45e-12 | 10 |
nephron tubule epithelial cell | 1.45e-12 | 10 |
glomerular cell | 4.16e-09 | 7 |
kidney corpuscule cell | 4.16e-09 | 7 |
glomerular endothelial cell | 2.57e-07 | 5 |