FFCP PHASE1:Hg19::chr1:204463918..204463963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5287 | |EntrezGene=5287 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8972 | |HGNC=8972 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SW98 | |UniProt=Q5SW98 | ||
|association_with_transcript=-66bp_to_ENST00000415899,uc001hax.1_5end | |association_with_transcript=-66bp_to_ENST00000415899,uc001hax.1_5end | ||
|cluster_id=chr1:204463918..204463963,- | |||
|coexpression_cluster_id=C2555 | |coexpression_cluster_id=C2555 | ||
|description=CAGE_peak_1_at_PIK3C2B_5end | |description=CAGE_peak_1_at_PIK3C2B_5end | ||
|id=chr1:204463918..204463963,- | |id=chr1:204463918..204463963,- | ||
|ontology_enrichment_celltype=CL:0000542!1.71e-12!53;CL:0000051!1.71e-12!53;CL:0000838!3.34e-12!52;CL:0000945!1.51e-08!24;CL:0000826!1.51e-08!24;CL:0000236!1.55e-07!14 | |ontology_enrichment_celltype=CL:0000542!1.71e-12!53;CL:0000051!1.71e-12!53;CL:0000838!3.34e-12!52;CL:0000945!1.51e-08!24;CL:0000826!1.51e-08!24;CL:0000236!1.55e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.05e-08;24!CL:0000542;7.63e-08;53!CL:0000236;1.87e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.26e-12,53;CL:0000051,1.26e-12,53;CL:0000838,2.47e-12,52;CL:0000945,1.24e-08,24;CL:0000826,1.24e-08,24;CL:0000236,1.31e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;7.63e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.43e-27!115;UBERON:0001049!2.83e-16!57;UBERON:0005068!2.83e-16!57;UBERON:0006241!2.83e-16!57;UBERON:0007135!2.83e-16!57;UBERON:0003080!6.57e-14!42;UBERON:0001017!8.93e-14!82;UBERON:0002780!1.57e-13!41;UBERON:0001890!1.57e-13!41;UBERON:0006240!1.57e-13!41;UBERON:0005743!2.76e-13!86;UBERON:0002346!8.34e-13!90;UBERON:0002020!1.26e-12!34;UBERON:0003528!1.26e-12!34;UBERON:0001893!1.51e-12!34;UBERON:0000073!1.55e-12!94;UBERON:0001016!1.55e-12!94;UBERON:0002616!2.39e-12!59;UBERON:0002791!2.77e-12!33;UBERON:0000955!6.51e-12!69;UBERON:0006238!6.51e-12!69;UBERON:0003075!1.30e-11!86;UBERON:0007284!1.30e-11!86;UBERON:0001869!1.89e-11!32;UBERON:0002619!1.86e-10!22;UBERON:0001950!1.24e-09!20;UBERON:0000956!8.98e-09!25;UBERON:0000203!8.98e-09!25;UBERON:0003056!1.54e-08!61;UBERON:0000064!1.11e-07!219 | |ontology_enrichment_uberon=UBERON:0007023!2.43e-27!115;UBERON:0001049!2.83e-16!57;UBERON:0005068!2.83e-16!57;UBERON:0006241!2.83e-16!57;UBERON:0007135!2.83e-16!57;UBERON:0003080!6.57e-14!42;UBERON:0001017!8.93e-14!82;UBERON:0002780!1.57e-13!41;UBERON:0001890!1.57e-13!41;UBERON:0006240!1.57e-13!41;UBERON:0005743!2.76e-13!86;UBERON:0002346!8.34e-13!90;UBERON:0002020!1.26e-12!34;UBERON:0003528!1.26e-12!34;UBERON:0001893!1.51e-12!34;UBERON:0000073!1.55e-12!94;UBERON:0001016!1.55e-12!94;UBERON:0002616!2.39e-12!59;UBERON:0002791!2.77e-12!33;UBERON:0000955!6.51e-12!69;UBERON:0006238!6.51e-12!69;UBERON:0003075!1.30e-11!86;UBERON:0007284!1.30e-11!86;UBERON:0001869!1.89e-11!32;UBERON:0002619!1.86e-10!22;UBERON:0001950!1.24e-09!20;UBERON:0000956!8.98e-09!25;UBERON:0000203!8.98e-09!25;UBERON:0003056!1.54e-08!61;UBERON:0000064!1.11e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.06e-10;34!UBERON:0002020;1.06e-10;34!UBERON:0001893;1.22e-10;34!UBERON:0002791;1.39e-10;32!UBERON:0002619;1.45e-10;22!UBERON:0001869;2.60e-10;32!UBERON:0002780;4.53e-10;41!UBERON:0001890;4.53e-10;41!UBERON:0001950;1.04e-09;20!UBERON:0000956;9.01e-09;25!UBERON:0000203;9.01e-09;25!UBERON:0000073;1.05e-08;53!UBERON:0002616;1.05e-08;53!UBERON:0007023;6.67e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.56e-27,114;UBERON:0001049,4.51e-16,56;UBERON:0005068,4.51e-16,56;UBERON:0006241,4.51e-16,56;UBERON:0007135,4.51e-16,56;UBERON:0000073,8.14e-15,53;UBERON:0002616,8.14e-15,53;UBERON:0011216,1.01e-13,223;UBERON:0002780,1.11e-13,41;UBERON:0001890,1.11e-13,41;UBERON:0003080,1.11e-13,41;UBERON:0006240,1.11e-13,41;UBERON:0001017,2.09e-13,81;UBERON:0001016,8.97e-13,89;UBERON:0003528,9.16e-13,34;UBERON:0002020,9.16e-13,34;UBERON:0001893,1.10e-12,34;UBERON:0002346,2.73e-12,86;UBERON:0002791,7.29e-12,32;UBERON:0001869,1.43e-11,32;UBERON:0000955,1.58e-11,68;UBERON:0006238,1.58e-11,68;UBERON:0003075,4.29e-11,82;UBERON:0007284,4.29e-11,82;UBERON:0002619,1.45e-10,22;UBERON:0001950,9.88e-10,20;UBERON:0000956,7.31e-09,25;UBERON:0000203,7.31e-09,25;UBERON:0003056,1.15e-08,61 | |||
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| ||
|short_description=p1@PIK3C2B | |short_description=p1@PIK3C2B | ||
}} | }} |
Latest revision as of 01:20, 20 September 2015
Short description: | p1@PIK3C2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PIK3C2B_5end |
Coexpression cluster: | C2555_Mast_brain_Hepatic_thymus_optic_cervical_corpus |
Association with transcript: | -66bp_to_ENST00000415899, uc001hax.1_5end |
EntrezGene: | PIK3C2B |
HGNC: | 8972 |
UniProt: | Q5SW98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.26e-12 | 53 |
common lymphoid progenitor | 1.26e-12 | 53 |
lymphoid lineage restricted progenitor cell | 2.47e-12 | 52 |
lymphocyte of B lineage | 1.24e-08 | 24 |
pro-B cell | 1.24e-08 | 24 |
B cell | 1.31e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.56e-27 | 114 |
neural tube | 4.51e-16 | 56 |
neural rod | 4.51e-16 | 56 |
future spinal cord | 4.51e-16 | 56 |
neural keel | 4.51e-16 | 56 |
regional part of nervous system | 8.14e-15 | 53 |
regional part of brain | 8.14e-15 | 53 |
organ system subdivision | 1.01e-13 | 223 |
regional part of forebrain | 1.11e-13 | 41 |
forebrain | 1.11e-13 | 41 |
anterior neural tube | 1.11e-13 | 41 |
future forebrain | 1.11e-13 | 41 |
central nervous system | 2.09e-13 | 81 |
nervous system | 8.97e-13 | 89 |
brain grey matter | 9.16e-13 | 34 |
gray matter | 9.16e-13 | 34 |
telencephalon | 1.10e-12 | 34 |
neurectoderm | 2.73e-12 | 86 |
regional part of telencephalon | 7.29e-12 | 32 |
cerebral hemisphere | 1.43e-11 | 32 |
brain | 1.58e-11 | 68 |
future brain | 1.58e-11 | 68 |
neural plate | 4.29e-11 | 82 |
presumptive neural plate | 4.29e-11 | 82 |
regional part of cerebral cortex | 1.45e-10 | 22 |
neocortex | 9.88e-10 | 20 |
cerebral cortex | 7.31e-09 | 25 |
pallium | 7.31e-09 | 25 |
pre-chordal neural plate | 1.15e-08 | 61 |