FFCP PHASE1:Hg19::chr19:24216213..24216314,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:24216213..24216314,+
|short_description=p1@ZNF254
|description=CAGE_peak_1_at_ZNF254_5end
|association_with_transcript=0bp_to_ENST00000342944,uc002nrr.1,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9534 | |EntrezGene=9534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13047 | |HGNC=13047 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2M4 | |UniProt=F5H2M4 | ||
|association_with_transcript=0bp_to_ENST00000342944,uc002nrr.1,uc002nrs.1,uc010xrk.1_5end | |||
|cluster_id=chr19:24216213..24216314,+ | |||
|description=CAGE_peak_1_at_ZNF254_5end | |||
|id=chr19:24216213..24216314,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.08e-07!18;CL:0000789!4.08e-07!18;CL:0002420!4.08e-07!18;CL:0002419!4.08e-07!18;CL:0000790!4.08e-07!18;CL:0000037!5.56e-07!172;CL:0000566!5.56e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.88e-07;18!CL:0000789;4.88e-07;18!CL:0002419;4.88e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.08e-07,18;CL:0000789,4.08e-07,18;CL:0002420,4.08e-07,18;CL:0002419,4.08e-07,18;CL:0000790,4.08e-07,18;CL:0000037,4.53e-07,168;CL:0000738,9.08e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;4.88e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.28e-20!82;UBERON:0000073!7.51e-20!94;UBERON:0001016!7.51e-20!94;UBERON:0005743!5.40e-19!86;UBERON:0007023!4.35e-18!115;UBERON:0001049!2.28e-17!57;UBERON:0005068!2.28e-17!57;UBERON:0006241!2.28e-17!57;UBERON:0007135!2.28e-17!57;UBERON:0000955!3.91e-16!69;UBERON:0006238!3.91e-16!69;UBERON:0002616!8.20e-15!59;UBERON:0003080!6.58e-14!42;UBERON:0002780!1.09e-13!41;UBERON:0001890!1.09e-13!41;UBERON:0006240!1.09e-13!41;UBERON:0002346!1.83e-11!90;UBERON:0001893!2.80e-11!34;UBERON:0003075!2.90e-11!86;UBERON:0007284!2.90e-11!86;UBERON:0002020!5.30e-11!34;UBERON:0003528!5.30e-11!34;UBERON:0002791!5.86e-11!33;UBERON:0001869!2.25e-10!32;UBERON:0003056!6.75e-09!61;UBERON:0000956!3.87e-08!25;UBERON:0000203!3.87e-08!25;UBERON:0002619!5.44e-08!22;UBERON:0000924!2.25e-07!173;UBERON:0006601!2.25e-07!173;UBERON:0001950!2.56e-07!20;UBERON:0004121!3.94e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.59e-10;41!UBERON:0001890;3.59e-10;41!UBERON:0000073;4.03e-10;53!UBERON:0002616;4.03e-10;53!UBERON:0001893;1.24e-09;34!UBERON:0003528;1.44e-09;34!UBERON:0002020;1.44e-09;34!UBERON:0002791;1.51e-09;32!UBERON:0001869;2.25e-09;32!UBERON:0000956;3.69e-08;25!UBERON:0000203;3.69e-08;25!UBERON:0001016;4.53e-08;83!UBERON:0002619;5.31e-08;22!UBERON:0000955;5.32e-08;68!UBERON:0001017;6.92e-08;75!UBERON:0001950;2.44e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.74e-20,89;UBERON:0001017,1.10e-19,81;UBERON:0007023,7.85e-18,114;UBERON:0001049,3.86e-17,56;UBERON:0005068,3.86e-17,56;UBERON:0006241,3.86e-17,56;UBERON:0007135,3.86e-17,56;UBERON:0000073,3.05e-16,53;UBERON:0002616,3.05e-16,53;UBERON:0000955,6.72e-16,68;UBERON:0006238,6.72e-16,68;UBERON:0002780,1.09e-13,41;UBERON:0001890,1.09e-13,41;UBERON:0003080,1.09e-13,41;UBERON:0006240,1.09e-13,41;UBERON:0002346,2.65e-11,86;UBERON:0001893,2.80e-11,34;UBERON:0003075,4.14e-11,82;UBERON:0007284,4.14e-11,82;UBERON:0003528,5.30e-11,34;UBERON:0002020,5.30e-11,34;UBERON:0002791,1.78e-10,32;UBERON:0001869,2.25e-10,32;UBERON:0003056,4.62e-09,61;UBERON:0011216,2.41e-08,223;UBERON:0000956,3.87e-08,25;UBERON:0000203,3.87e-08,25;UBERON:0002619,5.44e-08,22;UBERON:0001950,2.56e-07,20;UBERON:0004121,8.18e-07,171;UBERON:0000924,8.18e-07,171;UBERON:0006601,8.18e-07,171 | |||
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| ||
|short_description=p1@ZNF254 | |||
}} | }} |
Latest revision as of 01:09, 17 September 2015
Short description: | p1@ZNF254 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF254_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000342944, uc002nrr.1, uc002nrs.1, uc010xrk.1_5end |
EntrezGene: | ZNF254 |
HGNC: | 13047 |
UniProt: | F5H2M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.08e-07 | 18 |
alpha-beta T cell | 4.08e-07 | 18 |
immature T cell | 4.08e-07 | 18 |
mature T cell | 4.08e-07 | 18 |
immature alpha-beta T cell | 4.08e-07 | 18 |
hematopoietic stem cell | 4.53e-07 | 168 |
leukocyte | 9.08e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.74e-20 | 89 |
central nervous system | 1.10e-19 | 81 |
adult organism | 7.85e-18 | 114 |
neural tube | 3.86e-17 | 56 |
neural rod | 3.86e-17 | 56 |
future spinal cord | 3.86e-17 | 56 |
neural keel | 3.86e-17 | 56 |
regional part of nervous system | 3.05e-16 | 53 |
regional part of brain | 3.05e-16 | 53 |
brain | 6.72e-16 | 68 |
future brain | 6.72e-16 | 68 |
regional part of forebrain | 1.09e-13 | 41 |
forebrain | 1.09e-13 | 41 |
anterior neural tube | 1.09e-13 | 41 |
future forebrain | 1.09e-13 | 41 |
neurectoderm | 2.65e-11 | 86 |
telencephalon | 2.80e-11 | 34 |
neural plate | 4.14e-11 | 82 |
presumptive neural plate | 4.14e-11 | 82 |
brain grey matter | 5.30e-11 | 34 |
gray matter | 5.30e-11 | 34 |
regional part of telencephalon | 1.78e-10 | 32 |
cerebral hemisphere | 2.25e-10 | 32 |
pre-chordal neural plate | 4.62e-09 | 61 |
organ system subdivision | 2.41e-08 | 223 |
cerebral cortex | 3.87e-08 | 25 |
pallium | 3.87e-08 | 25 |
regional part of cerebral cortex | 5.44e-08 | 22 |
neocortex | 2.56e-07 | 20 |
ectoderm-derived structure | 8.18e-07 | 171 |
ectoderm | 8.18e-07 | 171 |
presumptive ectoderm | 8.18e-07 | 171 |