FF:10182-103D2: Difference between revisions

Latest revision as of 12:25, 3 June 2020

Name:	locus coeruleus - adult, donor10196
Species:	Human (Homo sapiens)
Library ID:	CNhs13808
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	locus coeruleus
dev stage	NA
sex	female
age	60
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004969

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13808		CAGE		DRX008676		DRR009548

Accession ID Hg19

Library id		BAM		CTSS
CNhs13808		DRZ000973		DRZ002358

Accession ID Hg38

Library id		BAM		CTSS
CNhs13808		DRZ012323		DRZ013708

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.217
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.691
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.337
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.0528
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.613
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.335
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0528
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.207
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.0763
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.0999
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.627
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.00863
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.158
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.848
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0528
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0528
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.135
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.0528
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0164
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0528
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.776
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.137
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.613
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.505
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0528
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.539
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.384
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0528
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	1.002
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0642
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.128
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.652
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0999
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0.0999
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.181
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.511
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.806
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	1.002
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0528
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.181
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.191
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0528
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.393
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.335
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.599
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0528
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.36
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0248
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0.0528
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13808

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0381
MA0003.1	MA0003.1	0.229
MA0004.1	MA0004.1	0.293
MA0006.1	MA0006.1	0.477
MA0007.1	MA0007.1	0.377
MA0009.1	MA0009.1	0.192
MA0014.1	MA0014.1	0.728
MA0017.1	MA0017.1	0.00477
MA0018.2	MA0018.2	0.0415
MA0019.1	MA0019.1	0.803
MA0024.1	MA0024.1	0.705
MA0025.1	MA0025.1	0.698
MA0027.1	MA0027.1	0.645
MA0028.1	MA0028.1	0.0647
MA0029.1	MA0029.1	0.205
MA0030.1	MA0030.1	0.318
MA0031.1	MA0031.1	0.78
MA0035.2	MA0035.2	0.0112
MA0038.1	MA0038.1	0.246
MA0039.2	MA0039.2	0.341
MA0040.1	MA0040.1	0.649
MA0041.1	MA0041.1	0.81
MA0042.1	MA0042.1	0.703
MA0043.1	MA0043.1	0.499
MA0046.1	MA0046.1	0.0208
MA0047.2	MA0047.2	0.0854
MA0048.1	MA0048.1	0.11
MA0050.1	MA0050.1	0.0254
MA0051.1	MA0051.1	0.123
MA0052.1	MA0052.1	0.757
MA0055.1	MA0055.1	0.00107
MA0057.1	MA0057.1	0.748
MA0058.1	MA0058.1	0.302
MA0059.1	MA0059.1	0.075
MA0060.1	MA0060.1	0.31
MA0061.1	MA0061.1	0.00555
MA0062.2	MA0062.2	0.00281
MA0065.2	MA0065.2	0.00104
MA0066.1	MA0066.1	0.0127
MA0067.1	MA0067.1	0.573
MA0068.1	MA0068.1	0.631
MA0069.1	MA0069.1	0.732
MA0070.1	MA0070.1	0.185
MA0071.1	MA0071.1	0.0415
MA0072.1	MA0072.1	0.714
MA0073.1	MA0073.1	0.444
MA0074.1	MA0074.1	0.182
MA0076.1	MA0076.1	0.123
MA0077.1	MA0077.1	0.0278
MA0078.1	MA0078.1	0.839
MA0079.2	MA0079.2	0.586
MA0080.2	MA0080.2	4.87447e-8
MA0081.1	MA0081.1	0.0273
MA0083.1	MA0083.1	0.108
MA0084.1	MA0084.1	0.227
MA0087.1	MA0087.1	0.221
MA0088.1	MA0088.1	0.13
MA0090.1	MA0090.1	0.239
MA0091.1	MA0091.1	0.333
MA0092.1	MA0092.1	0.291
MA0093.1	MA0093.1	0.344
MA0099.2	MA0099.2	1.25751e-13
MA0100.1	MA0100.1	0.699
MA0101.1	MA0101.1	0.00462
MA0102.2	MA0102.2	0.293
MA0103.1	MA0103.1	0.068
MA0104.2	MA0104.2	0.33
MA0105.1	MA0105.1	1.5944e-4
MA0106.1	MA0106.1	0.0258
MA0107.1	MA0107.1	0.00405
MA0108.2	MA0108.2	0.491
MA0111.1	MA0111.1	0.5
MA0112.2	MA0112.2	0.00104
MA0113.1	MA0113.1	0.495
MA0114.1	MA0114.1	0.00789
MA0115.1	MA0115.1	0.829
MA0116.1	MA0116.1	0.00233
MA0117.1	MA0117.1	0.877
MA0119.1	MA0119.1	0.1
MA0122.1	MA0122.1	0.88
MA0124.1	MA0124.1	0.862
MA0125.1	MA0125.1	0.192
MA0131.1	MA0131.1	0.819
MA0135.1	MA0135.1	0.0141
MA0136.1	MA0136.1	7.53915e-12
MA0137.2	MA0137.2	0.0696
MA0138.2	MA0138.2	0.252
MA0139.1	MA0139.1	0.349
MA0140.1	MA0140.1	0.00884
MA0141.1	MA0141.1	0.0153
MA0142.1	MA0142.1	0.356
MA0143.1	MA0143.1	0.0631
MA0144.1	MA0144.1	0.934
MA0145.1	MA0145.1	0.347
MA0146.1	MA0146.1	0.0212
MA0147.1	MA0147.1	0.202
MA0148.1	MA0148.1	0.0976
MA0149.1	MA0149.1	0.0148
MA0150.1	MA0150.1	0.0023
MA0152.1	MA0152.1	0.742
MA0153.1	MA0153.1	0.493
MA0154.1	MA0154.1	0.0249
MA0155.1	MA0155.1	0.654
MA0156.1	MA0156.1	5.01237e-7
MA0157.1	MA0157.1	0.583
MA0159.1	MA0159.1	0.00991
MA0160.1	MA0160.1	0.0724
MA0162.1	MA0162.1	0.155
MA0163.1	MA0163.1	1.00061e-7
MA0164.1	MA0164.1	0.6
MA0258.1	MA0258.1	0.0138
MA0259.1	MA0259.1	0.646

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13808

Novel motif	Logo	P-value
1	1	0.0438
10	10	0.0425
100	100	0.333
101	101	0.824
102	102	0.876
103	103	0.0667
104	104	0.139
105	105	0.164
106	106	0.0521
107	107	0.167
108	108	0.913
109	109	0.00468
11	11	0.0105
110	110	0.0334
111	111	0.205
112	112	0.419
113	113	0.53
114	114	0.133
115	115	0.842
116	116	0.156
117	117	0.00714
118	118	0.0982
119	119	0.248
12	12	0.624
120	120	0.141
121	121	0.447
122	122	0.915
123	123	0.968
124	124	0.134
125	125	0.257
126	126	0.0686
127	127	0.45
128	128	0.225
129	129	0.448
13	13	0.00209
130	130	0.226
131	131	0.0231
132	132	0.732
133	133	0.0104
134	134	0.69
135	135	0.19
136	136	0.00643
137	137	0.574
138	138	0.775
139	139	0.108
14	14	0.898
140	140	0.55
141	141	0.496
142	142	0.827
143	143	0.0408
144	144	0.875
145	145	0.155
146	146	0.396
147	147	0.603
148	148	0.297
149	149	0.0955
15	15	0.0557
150	150	0.159
151	151	0.728
152	152	0.167
153	153	0.935
154	154	0.455
155	155	0.789
156	156	0.229
157	157	0.459
158	158	0.145
159	159	0.00649
16	16	0.0414
160	160	0.196
161	161	0.162
162	162	0.84
163	163	0.842
164	164	0.0108
165	165	0.114
166	166	0.963
167	167	0.783
168	168	0.357
169	169	0.0151
17	17	0.0898
18	18	0.072
19	19	0.285
2	2	0.895
20	20	0.171
21	21	0.0635
22	22	0.274
23	23	0.487
24	24	0.0379
25	25	0.53
26	26	1.51374e-4
27	27	0.722
28	28	0.791
29	29	0.00891
3	3	0.0371
30	30	0.866
31	31	0.901
32	32	0.0126
33	33	0.0704
34	34	0.739
35	35	0.378
36	36	0.173
37	37	0.0468
38	38	0.31
39	39	0.43
4	4	0.961
40	40	0.0577
41	41	0.29
42	42	0.209
43	43	0.118
44	44	0.122
45	45	0.714
46	46	0.0328
47	47	0.0488
48	48	0.0375
49	49	0.22
5	5	0.695
50	50	0.358
51	51	0.362
52	52	0.715
53	53	0.903
54	54	0.425
55	55	0.611
56	56	0.51
57	57	0.302
58	58	0.33
59	59	0.0664
6	6	0.939
60	60	0.114
61	61	0.0779
62	62	0.158
63	63	0.174
64	64	0.157
65	65	0.22
66	66	0.183
67	67	0.363
68	68	0.373
69	69	0.614
7	7	0.0847
70	70	0.0154
71	71	0.00566
72	72	0.356
73	73	0.0624
74	74	0.873
75	75	0.0204
76	76	0.303
77	77	0.162
78	78	0.00346
79	79	0.273
8	8	0.0575
80	80	0.458
81	81	0.427
82	82	0.621
83	83	0.0801
84	84	0.511
85	85	0.383
86	86	0.15
87	87	6.95285e-4
88	88	0.751
89	89	0.194
9	9	0.496
90	90	0.0842
91	91	0.699
92	92	0.562
93	93	0.585
94	94	0.129
95	95	0.0215
96	96	0.802
97	97	0.605
98	98	0.248
99	99	0.526

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13808

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
FF:0011487 human locus coeruleus- adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0000988 (pons)
0002148 (locus ceruleus)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002680 (regional part of metencephalon)
0002616 (regional part of brain)
0004733 (segmental subdivision of hindbrain)
0004732 (segmental subdivision of nervous system)
0006331 (brainstem nucleus)
0009662 (hindbrain nucleus)
0000125 (neural nucleus)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0002308 (nucleus of brain)
0001017 (central nervous system)
0001016 (nervous system)
0001895 (metencephalon)
0002298 (brainstem)
0002028 (hindbrain)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0011487 (human locus coeruleus- adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000922,UBERON:0000955,UBERON:0000988,UBERON:0000483,UBERON:0002148,UBERON:0000033,UBERON:0000479,UBERON:0002346,UBERON:0000064,UBERON:0000073,UBERON:0004121,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000025,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000477,UBERON:0002020,UBERON:0003528,UBERON:0000481,UBERON:0000467,UBERON:0002616,UBERON:0001062,UBERON:0000119,UBERON:0005291,UBERON:0002680,UBERON:0002308,UBERON:0004733,UBERON:0004732,UBERON:0006331,UBERON:0009662,UBERON:0000125,UBERON:0006598,UBERON:0002532,UBERON:0001017,UBERON:0001016,UBERON:0000153,UBERON:0007811,UBERON:0000924,UBERON:0005743,UBERON:0001895,UBERON:0002298,UBERON:0002028,UBERON:0003075,UBERON:0001049,UBERON:0006238,UBERON:0006601,UBERON:0005068,UBERON:0006241,UBERON:0010092,UBERON:0003076,UBERON:0007277,UBERON:0007284,UBERON:0003057,UBERON:0007135
+|DRA_sample_Accession=CAGE@SAMD00004969
+|accession_numbers=CAGE;DRX008676;DRR009548;DRZ000973;DRZ002358;DRZ012323;DRZ013708
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0000988,UBERON:0002148,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002680,UBERON:0002616,UBERON:0004733,UBERON:0004732,UBERON:0006331,UBERON:0009662,UBERON:0000125,UBERON:0002020,UBERON:0010317,UBERON:0002308,UBERON:0001017,UBERON:0001016,UBERON:0001895,UBERON:0002298,UBERON:0002028
 |ancestors_in_cell_lineage_facet=
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0011487
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.84!696.96!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.63!423.14!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.13!271.24!C11orf9;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.12!129.41!PEG3;;chr22:38380543..38380569,-!p1@SOX10!2.05!112.48!SOX10;;chr10:48355030..48355090,+!p1@ZNF488!2.02!130.71!ZNF488;;chr8:53322304..53322340,-!p1@ST18!1.97!91.92!ST18;;chr21:34442540..34442560,+!p2@OLIG1!1.97!91.53!OLIG1;;chr12:106976774..106976788,+!p1@RFX4!1.92!82.09!RFX4;;chr2:145277882..145277967,-!p3@ZEB2!1.88!126.05!ZEB2;;chr3:181429704..181429722,+!p1@SOX2!1.77!57.53!SOX2;;chr9:77112244..77112262,+!p1@RORB!1.76!62.31!RORB;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.71!50.16!POU3F3;;chr9:114287433..114287513,+!p1@ZNF483!1.69!120.62!ZNF483;;chr10:134599649..134599653,-!p1@NKX6-2!1.68!46.41!NKX6-2;;chr16:1031762..1031781,+!p1@SOX8!1.67!45.64!SOX8;;chr8:53322347..53322378,-!p2@ST18!1.67!45.64!ST18;;chr21:34398234..34398250,+!p1@OLIG2!1.67!45.38!OLIG2;;chr12:106976678..106976708,+!p2@RFX4!1.65!43.44!RFX4;;chr12:26277956..26277980,-!p1@BHLHE41!1.54!116.23!BHLHE41;;chr12:103351444..103351461,+!p1@ASCL1!1.54!34.00!ASCL1;;chr11:8102846..8102892,+!p1@TUB!1.51!42.92!TUB;;chr12:26277817..26277863,-!p2@BHLHE41!1.48!39.17!BHLHE41;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.48!28.96!SMARCE1;;chr15:80696703..80696754,+!p1@ARNT2!1.47!37.49!ARNT2;;chr1:214161272..214161322,+!p1@PROX1!1.46!38.91!PROX1;;chr19:46801639..46801699,+!p1@HIF3A!1.45!27.28!HIF3A;;chr3:181429741..181429767,+!p2@SOX2!1.45!27.28!SOX2;;chr11:113930425..113930471,+!p1@ZBTB16!1.44!37.75!ZBTB16;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.44!26.76!ZBED1;;chr7:63505799..63505904,+!p1@ZNF727!1.44!26.24!ZNF727;;chr14:33408072..33408114,+!p2@NPAS3!1.42!29.61!NPAS3;;chr20:62680984..62680999,-!p1@SOX18!1.41!32.84!SOX18;;chr14:33403881..33403924,+!p1@NPAS3!1.38!22.88!NPAS3;;chr1:61548069..61548102,+!p3@NFIA!1.36!51.84!NFIA;;chr12:54779511..54779577,-!p5@ZNF385A!1.36!21.98!ZNF385A;;chr4:81118647..81118666,+!p1@PRDM8!1.33!26.63!PRDM8;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.33!20.56!POU3F3;;chr6:126112039..126112062,+!p8@NCOA7!1.30!22.62!NCOA7;;chr19:57352109..57352153,-!p2@ZIM2!1.30!18.75!ZIM2;;chr4:57547454..57547469,-!p1@HOPX!1.29!18.36!HOPX;;chr19:30863271..30863338,+!p1@ZNF536!1.28!18.23!ZNF536;;chr12:54785074..54785122,-!p2@ZNF385A!1.26!26.50!ZNF385A;;chr11:31832658..31832681,-!p1@PAX6!1.24!16.29!PAX6;;chr14:33403648..33403710,+!p3@NPAS3!1.24!16.29!NPAS3;;chr14:73360799..73360817,-!p1@DPF3!1.22!53.14!DPF3;;chr19:13135386..13135435,+!p4@NFIX!1.22!15.77!NFIX;;chr21:34442584..34442587,+!p3@OLIG1!1.22!15.77!OLIG1;;chr4:41750731..41750748,-!p1@PHOX2B!1.22!15.64!PHOX2B;;chr2:95963052..95963106,+!p1@KCNIP3!1.21!15.13!KCNIP3;;chr3:126076242..126076257,-!p1@KLF15!1.19!17.84!KLF15;;chr2:145275982..145276003,-!p7@ZEB2!1.18!13.96!ZEB2;;chr13:72441315..72441454,-!p1@DACH1!1.16!27.02!DACH1;;chr20:50179368..50179392,-!p2@NFATC2!1.16!17.32!NFATC2;;chr17:53342311..53342400,+!p1@HLF!1.16!15.26!HLF;;chr19:22193731..22193751,-!p1@ZNF208!1.16!13.45!ZNF208;;chr12:103352277..103352324,+!p2@ASCL1!1.16!13.45!ASCL1;;chr19:46800289..46800327,+!p2@HIF3A!1.16!13.45!HIF3A;;chr19:58545454..58545498,+!p1@ZSCAN1!1.16!13.45!ZSCAN1;;chr7:28725740..28725778,+!p1@CREB5!1.15!116.48!CREB5;;chr20:21494654..21494678,-!p2@NKX2-2!1.15!13.06!NKX2-2;;chr6:126070769..126070801,+!p1@HEY2!1.14!14.61!HEY2;;chr1:40105299..40105326,-!p1@HEYL!1.14!12.67!HEYL;;chr3:187463179..187463201,-!p2@BCL6!1.13!51.97!BCL6;;chr17:7492684..7492778,-!p2@SOX15!1.13!26.63!SOX15;;chr8:40755333..40755352,-!p1@ZMAT4!1.13!12.41!ZMAT4;;chr3:147127177..147127194,+!p2@ZIC1!1.12!12.28!ZIC1;;chr5:2751762..2751784,-!p1@IRX2!1.11!11.89!IRX2;;chr15:80733570..80733659,+!p2@ARNT2!1.11!11.89!ARNT2;;chr10:111987079..111987115,+!p3@MXI1!1.10!16.03!MXI1;;chr11:113930401..113930422,+!p3@ZBTB16!1.10!11.64!ZBTB16;;chr11:47400078..47400106,-!p1@SPI1!1.10!11.51!SPI1;;chr6:19837592..19837621,+!p1@ID4!1.09!69.17!ID4;;chr12:26277929..26277955,-!p3@BHLHE41!1.09!16.03!BHLHE41;;chr10:48359344..48359376,+!p2@ZNF488!1.09!11.25!ZNF488;;chr16:51185318..51185348,-!p2@SALL1!1.09!11.25!SALL1;;chr1:61548225..61548299,+!p1@NFIA!1.08!145.06!NFIA;;chr10:64134120..64134183,+!p1@ZNF365!1.08!13.45!ZNF365;;chr8:80679993..80680011,-!p1@HEY1!1.07!15.77!HEY1;;chr11:125034640..125034655,+!p1@PKNOX2!1.06!10.60!PKNOX2;;chr3:147127142..147127168,+!p1@ZIC1!1.06!10.47!ZIC1;;chr16:51185172..51185197,-!p1@SALL1!1.06!10.47!SALL1;;chr14:21994337..21994442,-!p1@SALL2!1.05!28.31!SALL2;;chr2:166326200..166326216,+!p1@CSRNP3!1.05!15.00!CSRNP3;;chr4:26344778..26344807,+!p8@RBPJ!1.05!10.34!RBPJ;;chr14:21994449..21994524,-!p2@SALL2!1.04!30.51!SALL2;;chr4:57547751..57547764,-!p6@HOPX!1.04!10.08!HOPX;;chr8:80680024..80680046,-!p2@HEY1!1.03!10.99!HEY1;;chr2:95963120..95963136,+!p2@KCNIP3!1.03!9.83!KCNIP3;;chr19:13135582..13135600,+!p3@NFIX!1.03!9.83!NFIX;;chr21:39870339..39870443,-!p1@ERG!1.03!9.83!ERG;;chr22:41763452..41763466,+!p2@TEF!1.03!9.70!TEF;;chr6:126112074..126112144,+!p1@NCOA7!1.02!129.15!NCOA7;;chr17:70117153..70117174,+!p1@SOX9!1.02!99.42!SOX9;;chr8:145560371..145560449,-!p1@SCRT1!1.02!9.57!SCRT1;;chr2:145277640..145277771,-!p1@ZEB2!1.01!125.66!ZEB2;;chr19:21512202..21512225,-!p1@ZNF708!1.01!47.83!ZNF708;;chr19:9879350..9879419,-!p2@ZNF846!1.01!19.78!ZNF846;;chr8:145560111..145560165,-!p2@SCRT1!1.01!9.31!SCRT1;;chr10:119302232..119302265,+!p1@EMX2!1.01!9.31!EMX2;;chr12:106976656..106976672,+!p4@RFX4!1.01!9.31!RFX4;;chr19:38085768..38085821,+!p1@ZNF540!1.00!13.57!ZNF540;;chr7:6655225..6655279,+!p1@ENST00000457543!1.00!13.57!ZNF853;;chr5:71803177..71803255,-!p1@ZNF366!1.00!9.05!ZNF366;;chr1:61547894..61547968,+!p2@NFIA!0.99!25.99!NFIA;;chr20:51588873..51588953,+!p1@TSHZ2!0.99!11.64!TSHZ2;;chr17:38219209..38219230,+!p1@THRA!0.98!114.03!THRA;;chr1:151032860..151032918,+!p1@MLLT11!0.98!103.04!MLLT11;;chr12:54785054..54785072,-!p4@ZNF385A!0.98!9.70!ZNF385A;;chr1:217263131..217263207,-!p4@ESRRG!0.98!8.53!ESRRG;;chr16:67198633..67198671,+!p1@HSF4!0.98!8.53!HSF4;;chr2:2334997..2335053,-!p1@MYT1L!0.98!8.53!MYT1L;;chrX:106959661..106959763,-!p4@TSC22D3!0.97!25.34!TSC22D3;;chr3:114343768..114343822,-!p1@ZBTB20!0.96!36.33!ZBTB20;;chr3:52001396..52001425,-!p4@PCBP4!0.96!14.61!PCBP4;;chrX:84498989..84499003,+!p1@ZNF711!0.96!11.12!ZNF711;;chr11:8102819..8102845,+!p3@TUB!0.96!10.21!TUB;;chr2:239148671..239148686,-!p1@HES6!0.95!29.99!HES6;;chrX:70315688..70315709,+!p1@FOXO4!0.95!19.00!FOXO4;;chr2:16080659..16080685,+!p1@MYCN!0.95!8.02!MYCN;;chr2:177053386..177053402,+!p1@HOXD1!0.95!7.89!HOXD1;;chr20:21494684..21494708,-!p1@NKX2-2!0.95!7.89!NKX2-2;;chr12:54772960..54773015,-!p3@ZNF385A!0.94!38.66!ZNF385A;;chr19:21512144..21512191,-!p2@ZNF708!0.94!36.97!ZNF708;;chr3:114819124..114819200,-!p3@ZBTB20!0.94!18.49!ZBTB20;;chr1:151032922..151032951,+!p2@MLLT11!0.94!13.19!MLLT11;;chr3:126076264..126076305,-!p2@KLF15!0.94!10.99!KLF15;;chr3:114173720..114173794,-!p6@ZBTB20!0.94!7.76!ZBTB20;;chr10:64134045..64134083,+!p3@ZNF365!0.94!7.76!ZNF365;;chr9:14314131..14314147,-!p2@NFIB!0.93!43.31!NFIB;;chr11:113930291..113930339,+!p2@ZBTB16!0.93!12.67!ZBTB16;;chr1:23696348..23696363,-!p4@ZNF436!0.93!8.53!ZNF436;;chr3:141105705..141105770,+!p4@ZBTB38!0.92!8.92!ZBTB38;;chr4:57522598..57522664,-!p3@HOPX!0.92!7.37!HOPX;;chr14:33408493..33408525,+!p4@NPAS3!0.92!7.24!NPAS3;;chr19:53636125..53636178,-!p1@ZNF415!0.91!20.94!ZNF415;;chr15:57511609..57511651,+!p2@TCF12!0.91!12.28!TCF12;;chr7:64023410..64023428,-!p2@ZNF680!0.91!11.51!ZNF680;;chr7:50344289..50344323,+!p1@IKZF1!0.91!7.11!IKZF1;;chr13:72441074..72441172,-!p2@DACH1!0.91!7.11!DACH1;;chr7:86781858..86781879,+!p3@DMTF1!0.90!11.64!DMTF1;;chr20:50159198..50159299,-!p1@NFATC2!0.90!10.47!NFATC2;;chr4:57522166..57522260,-!p2@HOPX!0.90!8.02!HOPX;;chr2:145275947..145275981,-!p10@ZEB2!0.90!6.98!ZEB2;;chr17:37764128..37764258,-!p1@NEUROD2!0.90!6.98!NEUROD2;;chr11:31832862..31832884,-!p2@PAX6!0.90!6.98!PAX6;;chr12:54778471..54778528,-!p1@ZNF385A!0.90!6.98!ZNF385A;;chr7:28448965..28448994,+!p2@CREB5!0.89!24.95!CREB5;;chr19:21512115..21512135,-!p3@ZNF708!0.89!14.35!ZNF708;;chr13:45151509..45151539,-!p6@TSC22D1!0.89!11.76!TSC22D1;;chr1:61924375..61924380,+!p6@NFIA!0.89!9.70!NFIA;;chr5:92919100..92919135,+!p3@NR2F1!0.89!8.40!NR2F1;;chr1:61548118..61548129,+!p9@NFIA!0.89!7.63!NFIA;;chr5:124084493..124084524,-!p2@ZNF608!0.88!15.13!ZNF608;;chr9:14314946..14314983,-!p8@NFIB!0.88!6.59!NFIB;;chr18:76739816..76739822,+!p1@SALL3!0.88!6.59!SALL3;;chr15:60884706..60884743,-!p1@RORA!0.87!35.16!RORA;;chr10:35484053..35484076,+!p1@CREM!0.87!16.81!CREM;;chrX:118739835..118739862,-!p1@NKRF!0.87!7.11!NKRF;;chr15:80696666..80696700,+!p4@ARNT2!0.87!6.46!ARNT2;;chr2:60781201..60781258,-!p3@BCL11A!0.87!6.46!BCL11A;;chr6:15401104..15401166,+!p5@JARID2!0.87!6.33!JARID2;;chr5:124082322..124082364,-!p1@ZNF608!0.86!16.55!ZNF608;;chr13:46549911..46549956,-!p3@ZC3H13!0.86!9.05!ZC3H13;;chr19:57183114..57183145,-!p1@ZNF835!0.86!7.11!ZNF835;;chr11:31839488..31839515,-!p3@PAX6!0.86!6.21!PAX6;;chr14:22005197..22005261,-!p3@SALL2!0.86!6.21!SALL2;;chr10:38265517..38265591,-!p1@ZNF25!0.85!25.08!ZNF25;;chr1:244219775..244219893,+!p2@ZNF238!0.85!8.53!ZNF238;;chr20:42544782..42544828,+!p4@TOX2!0.85!6.08!TOX2;;chr4:26344754..26344772,+!p10@RBPJ!0.85!6.08!RBPJ;;chr15:80696836..80696853,+!p7@ARNT2!0.85!6.08!ARNT2;;chr18:45935720..45935772,-!p1@ZBTB7C!0.85!6.08!ZBTB7C;;chr11:31832687..31832704,-!p6@PAX6!0.85!6.08!PAX6;;chr8:30890810..30890880,-!p1@PURG!0.85!6.08!PURG;;chr21:47063625..47063658,+!p1@PCBP3!0.84!27.54!PCBP3;;chr20:3388541..3388575,-!p2@C20orf194!0.84!24.43!C20orf194;;chr6:91006518..91006570,-!p1@BACH2!0.84!14.22!BACH2;;chr11:85393886..85393913,-!p3@CREBZF!0.84!5.95!CREBZF;;chr16:85932760..85932775,+!p1@IRF8!0.84!5.95!IRF8;;chr17:47439437..47439533,-!p1@ZNF652!0.83!49.77!ZNF652;;chr17:38219143..38219154,+!p2@THRA!0.83!21.72!THRA;;chr2:214016314..214016343,-!p2@IKZF2!0.83!9.95!IKZF2;;chr1:170633348..170633399,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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001895;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002028;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002148;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002298;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002308;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/locus%2520coeruleus%2520-%2520adult%252c%2520donor10196.CNhs13808.10182-103D2.hg38.nobarcode.ctss.bed.gz
 |id=FF:10182-103D2
-|is_a=FF:0000004;;FF:0000210;;FF:0011487
+|is_a=FF:0011487
+|is_obsolete=
+|library_id=CNhs13808
+|library_id_phase_based=2:CNhs13808
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10182
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10182
 |name=locus coeruleus - adult, donor10196
 |namespace=
@@ Line 44: / Line 63: @@
 |profile_rnaseq=
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 |rna_box=103
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=56.1675
 |sample_age=60
+|sample_category=tissues
 |sample_cell_catalog=NA
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.2984794918556e-272!GO:0005737;cytoplasm;8.40459757877851e-159!GO:0044444;cytoplasmic part;3.76835726670946e-104!GO:0043226;organelle;4.16390288020146e-101!GO:0043229;intracellular organelle;1.47127063549509e-100!GO:0043227;membrane-bound organelle;5.59890305261127e-92!GO:0043231;intracellular membrane-bound organelle;8.74469971118905e-92!GO:0005515;protein binding;1.58133392291789e-65!GO:0044422;organelle part;1.33376307626583e-64!GO:0044446;intracellular organelle part;1.51853172068648e-63!GO:0032991;macromolecular complex;1.48071013509029e-57!GO:0016043;cellular component organization and biogenesis;1.19288700804972e-46!GO:0005739;mitochondrion;1.67657409593632e-44!GO:0030529;ribonucleoprotein complex;1.12252785780219e-43!GO:0003723;RNA binding;2.92510151179676e-39!GO:0033036;macromolecule localization;3.9429369000193e-37!GO:0015031;protein transport;1.06483805261816e-35!GO:0031090;organelle membrane;6.69504415124304e-35!GO:0008104;protein localization;5.93751726093243e-34!GO:0045184;establishment of protein localization;3.39621945911189e-33!GO:0044429;mitochondrial part;3.63138739378131e-32!GO:0043234;protein complex;1.10899699325112e-30!GO:0046907;intracellular transport;1.3352312462401e-30!GO:0043233;organelle lumen;1.05607428970225e-29!GO:0031974;membrane-enclosed lumen;1.05607428970225e-29!GO:0044238;primary metabolic process;2.86923711083114e-28!GO:0031975;envelope;3.32468664094052e-28!GO:0031967;organelle envelope;4.68234607498936e-28!GO:0044428;nuclear part;6.49346223782601e-28!GO:0044237;cellular metabolic process;6.34915854677647e-27!GO:0005829;cytosol;8.30368260606122e-27!GO:0051649;establishment of cellular localization;1.44351726625304e-26!GO:0051641;cellular localization;1.90010889354157e-26!GO:0016071;mRNA metabolic process;7.21807176374968e-26!GO:0016192;vesicle-mediated transport;5.81543472989684e-25!GO:0005840;ribosome;4.09099181241396e-24!GO:0019538;protein metabolic process;1.31731585784744e-23!GO:0008380;RNA splicing;2.20322389275539e-23!GO:0043170;macromolecule metabolic process;2.55483927355458e-23!GO:0005740;mitochondrial envelope;3.05242623495495e-22!GO:0006396;RNA processing;4.03621201839628e-22!GO:0006886;intracellular protein transport;4.91324593852818e-22!GO:0031966;mitochondrial membrane;8.95720133434436e-22!GO:0006412;translation;1.19225453451241e-21!GO:0006397;mRNA processing;2.40708115992965e-21!GO:0005634;nucleus;2.7656138030846e-21!GO:0044260;cellular macromolecule metabolic process;4.25216796130001e-21!GO:0006119;oxidative phosphorylation;1.00934855696937e-20!GO:0009058;biosynthetic process;1.6795712156977e-20!GO:0019866;organelle inner membrane;3.54036952179971e-20!GO:0044267;cellular protein metabolic process;4.78254501016078e-20!GO:0003735;structural constituent of ribosome;1.1429328677795e-19!GO:0005743;mitochondrial inner membrane;3.34381767560512e-19!GO:0006996;organelle organization and biogenesis;1.18513136854841e-18!GO:0031982;vesicle;1.0173447410894e-17!GO:0005794;Golgi apparatus;1.52913030590777e-17!GO:0033279;ribosomal subunit;1.62039444555711e-17!GO:0000166;nucleotide binding;1.62314212347286e-17!GO:0044249;cellular biosynthetic process;2.1803705052125e-17!GO:0065003;macromolecular complex assembly;6.18295183855135e-17!GO:0031410;cytoplasmic vesicle;6.45977612569571e-17!GO:0005681;spliceosome;2.28978483280175e-16!GO:0044455;mitochondrial membrane part;3.68912628730128e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.51499348874766e-16!GO:0009059;macromolecule biosynthetic process;5.18169359228203e-16!GO:0016462;pyrophosphatase activity;5.91646257250599e-16!GO:0031988;membrane-bound vesicle;5.93436739801571e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;6.64637046225435e-16!GO:0031981;nuclear lumen;7.29066942293384e-16!GO:0016023;cytoplasmic membrane-bound vesicle;3.2648195591548e-15!GO:0022607;cellular component assembly;3.57932473517029e-15!GO:0017111;nucleoside-triphosphatase activity;3.83772171734917e-15!GO:0005746;mitochondrial respiratory chain;8.09122238606351e-15!GO:0050136;NADH dehydrogenase (quinone) activity;8.36960341471051e-15!GO:0003954;NADH dehydrogenase activity;8.36960341471051e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.36960341471051e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.14912651369503e-14!GO:0012505;endomembrane system;6.68225154760554e-13!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.20827816854686e-12!GO:0044445;cytosolic part;1.21397089364768e-12!GO:0006457;protein folding;1.21397089364768e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.21397089364768e-12!GO:0045271;respiratory chain complex I;1.21397089364768e-12!GO:0005747;mitochondrial respiratory chain complex I;1.21397089364768e-12!GO:0048770;pigment granule;1.21397089364768e-12!GO:0042470;melanosome;1.21397089364768e-12!GO:0031980;mitochondrial lumen;1.42885480346847e-12!GO:0005759;mitochondrial matrix;1.42885480346847e-12!GO:0032553;ribonucleotide binding;1.72303725434432e-12!GO:0032555;purine ribonucleotide binding;1.72303725434432e-12!GO:0042775;organelle ATP synthesis coupled electron transport;3.29789815538478e-12!GO:0042773;ATP synthesis coupled electron transport;3.29789815538478e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.62531926753626e-12!GO:0043283;biopolymer metabolic process;3.6307504123872e-12!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.44544325755354e-12!GO:0016874;ligase activity;6.64994894178895e-12!GO:0017076;purine nucleotide binding;1.02076214447669e-11!GO:0043228;non-membrane-bound organelle;1.06598237043906e-11!GO:0043232;intracellular non-membrane-bound organelle;1.06598237043906e-11!GO:0003924;GTPase activity;1.34381078592905e-11!GO:0010467;gene expression;1.36576173197195e-11!GO:0022618;protein-RNA complex assembly;1.98892667388569e-11!GO:0048193;Golgi vesicle transport;6.4952540528694e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;8.13214599052709e-11!GO:0006512;ubiquitin cycle;1.44640813547785e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;1.80560609031886e-10!GO:0005654;nucleoplasm;1.81672685357718e-10!GO:0006605;protein targeting;2.72859086633661e-10!GO:0006511;ubiquitin-dependent protein catabolic process;2.7885735687607e-10!GO:0016044;membrane organization and biogenesis;2.87019952209203e-10!GO:0019941;modification-dependent protein catabolic process;3.04378029792788e-10!GO:0043632;modification-dependent macromolecule catabolic process;3.04378029792788e-10!GO:0044257;cellular protein catabolic process;3.62062535048548e-10!GO:0051082;unfolded protein binding;5.59299553494439e-10!GO:0007264;small GTPase mediated signal transduction;5.994961603915e-10!GO:0008135;translation factor activity, nucleic acid binding;6.44678711447219e-10!GO:0008134;transcription factor binding;7.00328440494255e-10!GO:0015935;small ribosomal subunit;8.81901518244237e-10!GO:0045045;secretory pathway;1.07952455546623e-09!GO:0008092;cytoskeletal protein binding;1.10898263109469e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.16212022494835e-09!GO:0044451;nucleoplasm part;1.34159217560923e-09!GO:0044265;cellular macromolecule catabolic process;1.41982711431109e-09!GO:0008565;protein transporter activity;1.68946253903777e-09!GO:0005768;endosome;1.86005554173455e-09!GO:0000502;proteasome complex (sensu Eukaryota);1.9220970333044e-09!GO:0005525;GTP binding;2.14767124898535e-09!GO:0007010;cytoskeleton organization and biogenesis;2.79333470984396e-09!GO:0019829;cation-transporting ATPase activity;3.21204755022814e-09!GO:0043412;biopolymer modification;5.02981257070139e-09!GO:0051186;cofactor metabolic process;8.14839405773702e-09!GO:0030695;GTPase regulator activity;8.42485656717869e-09!GO:0043687;post-translational protein modification;9.64456715712675e-09!GO:0006464;protein modification process;1.03802160157248e-08!GO:0006810;transport;1.49132546365407e-08!GO:0015934;large ribosomal subunit;1.50350343236587e-08!GO:0044248;cellular catabolic process;2.3311795496886e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.47130052470707e-08!GO:0005783;endoplasmic reticulum;2.68072655230642e-08!GO:0015630;microtubule cytoskeleton;2.70571562528296e-08!GO:0051179;localization;3.49519770387388e-08!GO:0006793;phosphorus metabolic process;4.2775865597784e-08!GO:0006796;phosphate metabolic process;4.2775865597784e-08!GO:0032561;guanyl ribonucleotide binding;4.61659785372667e-08!GO:0019001;guanyl nucleotide binding;4.61659785372667e-08!GO:0048523;negative regulation of cellular process;5.45363548755258e-08!GO:0030135;coated vesicle;6.00753941108671e-08!GO:0043285;biopolymer catabolic process;6.58141521218016e-08!GO:0015986;ATP synthesis coupled proton transport;1.00720832639316e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.00720832639316e-07!GO:0030163;protein catabolic process;1.11227745227392e-07!GO:0016604;nuclear body;1.27612882390016e-07!GO:0006446;regulation of translational initiation;1.27612882390016e-07!GO:0006413;translational initiation;1.34980494513748e-07!GO:0005083;small GTPase regulator activity;1.67594967802267e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;1.69475821907796e-07!GO:0000375;RNA splicing, via transesterification reactions;1.69475821907796e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.69475821907796e-07!GO:0006913;nucleocytoplasmic transport;1.9480369149888e-07!GO:0003743;translation initiation factor activity;2.60407322111288e-07!GO:0006461;protein complex assembly;2.65938778884318e-07!GO:0016607;nuclear speck;2.77263474923494e-07!GO:0005761;mitochondrial ribosome;3.3188481655318e-07!GO:0000313;organellar ribosome;3.3188481655318e-07!GO:0044431;Golgi apparatus part;3.3188481655318e-07!GO:0051169;nuclear transport;3.51862267500916e-07!GO:0030036;actin cytoskeleton organization and biogenesis;4.10776146254682e-07!GO:0006897;endocytosis;4.10776146254682e-07!GO:0010324;membrane invagination;4.10776146254682e-07!GO:0009060;aerobic respiration;4.88433273702648e-07!GO:0005635;nuclear envelope;7.31809207835568e-07!GO:0051234;establishment of localization;7.48804955986702e-07!GO:0015631;tubulin binding;7.77574487705775e-07!GO:0031965;nuclear membrane;8.17144703817758e-07!GO:0009057;macromolecule catabolic process;8.23841144336623e-07!GO:0032559;adenyl ribonucleotide binding;8.40494640110856e-07!GO:0032940;secretion by cell;8.40494640110856e-07!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);9.07834376377581e-07!GO:0048471;perinuclear region of cytoplasm;9.70222847906779e-07!GO:0005874;microtubule;1.18265421294577e-06!GO:0045333;cellular respiration;1.35964468301643e-06!GO:0008639;small protein conjugating enzyme activity;1.65709807810562e-06!GO:0048519;negative regulation of biological process;1.6712053448726e-06!GO:0006732;coenzyme metabolic process;1.73089582906371e-06!GO:0046034;ATP metabolic process;2.27370210016943e-06!GO:0048475;coated membrane;2.34838271901085e-06!GO:0030117;membrane coat;2.34838271901085e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.3799299688117e-06!GO:0004842;ubiquitin-protein ligase activity;2.3799299688117e-06!GO:0019787;small conjugating protein ligase activity;2.38729840485002e-06!GO:0005524;ATP binding;2.41034960694248e-06!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.42571666205542e-06!GO:0031252;leading edge;2.98985539590142e-06!GO:0006754;ATP biosynthetic process;3.47597270847279e-06!GO:0006753;nucleoside phosphate metabolic process;3.47597270847279e-06!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.59633516775808e-06!GO:0030554;adenyl nucleotide binding;3.6391534763475e-06!GO:0017038;protein import;3.81136636560399e-06!GO:0005905;coated pit;4.01291535685876e-06!GO:0030029;actin filament-based process;4.43483169156344e-06!GO:0016469;proton-transporting two-sector ATPase complex;4.44661620725358e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.44661620725358e-06!GO:0009144;purine nucleoside triphosphate metabolic process;4.44661620725358e-06!GO:0009141;nucleoside triphosphate metabolic process;4.68353701155111e-06!GO:0009055;electron carrier activity;4.94302700222346e-06!GO:0009199;ribonucleoside triphosphate metabolic process;5.65346621369291e-06!GO:0009150;purine ribonucleotide metabolic process;5.74519383964467e-06!GO:0016310;phosphorylation;5.85133254872331e-06!GO:0006163;purine nucleotide metabolic process;5.9766273606839e-06!GO:0005730;nucleolus;6.2934669693504e-06!GO:0006099;tricarboxylic acid cycle;7.27612924160679e-06!GO:0046356;acetyl-CoA catabolic process;7.27612924160679e-06!GO:0009152;purine ribonucleotide biosynthetic process;7.9608016489202e-06!GO:0006164;purine nucleotide biosynthetic process;8.82528098203003e-06!GO:0008287;protein serine/threonine phosphatase complex;9.225470024687e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.64658855587974e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.64658855587974e-06!GO:0019899;enzyme binding;1.01084366944055e-05!GO:0009109;coenzyme catabolic process;1.18250567424847e-05!GO:0043005;neuron projection;1.19303780135429e-05!GO:0000902;cell morphogenesis;1.19506043449552e-05!GO:0032989;cellular structure morphogenesis;1.19506043449552e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.23356166532294e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.23356166532294e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.23356166532294e-05!GO:0051246;regulation of protein metabolic process;1.30466239647932e-05!GO:0045259;proton-transporting ATP synthase complex;1.30466239647932e-05!GO:0016881;acid-amino acid ligase activity;1.3259217750066e-05!GO:0009259;ribonucleotide metabolic process;1.33756131682124e-05!GO:0044440;endosomal part;1.42632979406708e-05!GO:0010008;endosome membrane;1.42632979406708e-05!GO:0000139;Golgi membrane;1.57585124638504e-05!GO:0016887;ATPase activity;1.67932184254646e-05!GO:0005769;early endosome;1.6908104289937e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.88644174582987e-05!GO:0007399;nervous system development;2.40551165469078e-05!GO:0012501;programmed cell death;2.60051330472001e-05!GO:0051187;cofactor catabolic process;2.62919808587024e-05!GO:0008017;microtubule binding;3.04576791197486e-05!GO:0030136;clathrin-coated vesicle;3.16883194249526e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.30101089360652e-05!GO:0003712;transcription cofactor activity;3.38102084102703e-05!GO:0008219;cell death;3.44344747806817e-05!GO:0016265;death;3.44344747806817e-05!GO:0006915;apoptosis;3.44927783210229e-05!GO:0006084;acetyl-CoA metabolic process;3.58190143529601e-05!GO:0042623;ATPase activity, coupled;3.84619748215431e-05!GO:0003779;actin binding;3.9685878358828e-05!GO:0007242;intracellular signaling cascade;3.9685878358828e-05!GO:0009260;ribonucleotide biosynthetic process;4.23173645062598e-05!GO:0044432;endoplasmic reticulum part;4.38862691170541e-05!GO:0005770;late endosome;4.99849809276508e-05!GO:0016564;transcription repressor activity;5.0296848228257e-05!GO:0008047;enzyme activator activity;5.25017582967709e-05!GO:0005096;GTPase activator activity;7.49424257947037e-05!GO:0045786;negative regulation of progression through cell cycle;8.94394739663991e-05!GO:0000245;spliceosome assembly;9.78881742885961e-05!GO:0030120;vesicle coat;9.97881764697512e-05!GO:0030662;coated vesicle membrane;9.97881764697512e-05!GO:0044453;nuclear membrane part;0.000101165456205788!GO:0007265;Ras protein signal transduction;0.000104875636048081!GO:0006606;protein import into nucleus;0.000128537778100035!GO:0009056;catabolic process;0.000130032920440151!GO:0019717;synaptosome;0.000141767283027374!GO:0051170;nuclear import;0.000144194523000329!GO:0005643;nuclear pore;0.000174774688495941!GO:0051188;cofactor biosynthetic process;0.000186873816534813!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000192602832367687!GO:0015399;primary active transmembrane transporter activity;0.000192602832367687!GO:0051128;regulation of cellular component organization and biogenesis;0.00021059872137924!GO:0043069;negative regulation of programmed cell death;0.000232669809292752!GO:0000159;protein phosphatase type 2A complex;0.000242909049806469!GO:0031072;heat shock protein binding;0.000293352893617499!GO:0003714;transcription corepressor activity;0.000317225983673195!GO:0043066;negative regulation of apoptosis;0.000327305755775298!GO:0032446;protein modification by small protein conjugation;0.000333547909447265!GO:0005875;microtubule associated complex;0.00035334326628231!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000359421434378358!GO:0003729;mRNA binding;0.000360045110556998!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000360060884593337!GO:0006366;transcription from RNA polymerase II promoter;0.000373319879338689!GO:0006752;group transfer coenzyme metabolic process;0.000373319879338689!GO:0006403;RNA localization;0.000381955443662582!GO:0030118;clathrin coat;0.000385602406610187!GO:0016070;RNA metabolic process;0.000385602406610187!GO:0005789;endoplasmic reticulum membrane;0.000389814564913523!GO:0016197;endosome transport;0.000394520092655655!GO:0005741;mitochondrial outer membrane;0.000437633015976739!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000449568560324149!GO:0004812;aminoacyl-tRNA ligase activity;0.000449568560324149!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000449568560324149!GO:0048468;cell development;0.000454233613819624!GO:0006607;NLS-bearing substrate import into nucleus;0.000457974435361329!GO:0015980;energy derivation by oxidation of organic compounds;0.00046021022736722!GO:0043492;ATPase activity, coupled to movement of substances;0.000461306424102146!GO:0050657;nucleic acid transport;0.000461306424102146!GO:0051236;establishment of RNA localization;0.000461306424102146!GO:0050658;RNA transport;0.000461306424102146!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000472443696711488!GO:0031901;early endosome membrane;0.000473447600835625!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000474520483199246!GO:0005798;Golgi-associated vesicle;0.000477871208771546!GO:0016126;sterol biosynthetic process;0.000491805978592105!GO:0006613;cotranslational protein targeting to membrane;0.00050468904902636!GO:0030133;transport vesicle;0.000517714298490587!GO:0016567;protein ubiquitination;0.000541907278413759!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000543594039756408!GO:0006888;ER to Golgi vesicle-mediated transport;0.000555158245901658!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000602335391420959!GO:0043038;amino acid activation;0.000631556248098675!GO:0006418;tRNA aminoacylation for protein translation;0.000631556248098675!GO:0043039;tRNA aminoacylation;0.000631556248098675!GO:0022890;inorganic cation transmembrane transporter activity;0.000640776438765706!GO:0006916;anti-apoptosis;0.000677562496839046!GO:0005793;ER-Golgi intermediate compartment;0.00069105167490617!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000787364904422401!GO:0030532;small nuclear ribonucleoprotein complex;0.000857244353502275!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000926588504020797!GO:0050789;regulation of biological process;0.000942823991424287!GO:0008601;protein phosphatase type 2A regulator activity;0.000942823991424287!GO:0005773;vacuole;0.000957800521144589!GO:0030027;lamellipodium;0.000960729795005666!GO:0051087;chaperone binding;0.00101978419318024!GO:0008361;regulation of cell size;0.00113529257093118!GO:0000151;ubiquitin ligase complex;0.0012290038707964!GO:0008654;phospholipid biosynthetic process;0.00126548262102585!GO:0006892;post-Golgi vesicle-mediated transport;0.0012919618197387!GO:0006323;DNA packaging;0.00130080014186558!GO:0031968;organelle outer membrane;0.00137408854352647!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00137408854352647!GO:0019867;outer membrane;0.00141718432998972!GO:0016791;phosphoric monoester hydrolase activity;0.00143347211987732!GO:0030867;rough endoplasmic reticulum membrane;0.00144240941742814!GO:0043566;structure-specific DNA binding;0.00152063107267977!GO:0004721;phosphoprotein phosphatase activity;0.00158955610981065!GO:0050794;regulation of cellular process;0.00160303367709528!GO:0005791;rough endoplasmic reticulum;0.00174948207819969!GO:0016050;vesicle organization and biogenesis;0.00181096762968038!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00184934526525257!GO:0016049;cell growth;0.00187905522479357!GO:0009108;coenzyme biosynthetic process;0.00191951785936946!GO:0051056;regulation of small GTPase mediated signal transduction;0.00191951785936946!GO:0005938;cell cortex;0.00194342792214396!GO:0006414;translational elongation;0.00195055424673621!GO:0050767;regulation of neurogenesis;0.00195055424673621!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00199944202455783!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00199944202455783!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00199944202455783!GO:0003724;RNA helicase activity;0.00205823128064756!GO:0019208;phosphatase regulator activity;0.00216043604362355!GO:0016568;chromatin modification;0.00218369986185366!GO:0009117;nucleotide metabolic process;0.00222190434386213!GO:0009966;regulation of signal transduction;0.00224400284352792!GO:0046467;membrane lipid biosynthetic process;0.00225810793884888!GO:0007019;microtubule depolymerization;0.00229454017663585!GO:0009892;negative regulation of metabolic process;0.00230727174961533!GO:0006259;DNA metabolic process;0.00242737160040875!GO:0016311;dephosphorylation;0.00264632928153755!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00270112341545071!GO:0008026;ATP-dependent helicase activity;0.00284014986619377!GO:0030425;dendrite;0.00287437115209556!GO:0007017;microtubule-based process;0.0030009744112294!GO:0022406;membrane docking;0.00308277802209812!GO:0048278;vesicle docking;0.00308277802209812!GO:0005839;proteasome core complex (sensu Eukaryota);0.00310742451309235!GO:0006650;glycerophospholipid metabolic process;0.00312864123489878!GO:0043623;cellular protein complex assembly;0.00315109876986727!GO:0001726;ruffle;0.00319359269117408!GO:0008139;nuclear localization sequence binding;0.00323997974294941!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00361553655866649!GO:0006402;mRNA catabolic process;0.00389217472546279!GO:0003697;single-stranded DNA binding;0.00407103168778415!GO:0043209;myelin sheath;0.00411738381395022!GO:0030132;clathrin coat of coated pit;0.00416418757860339!GO:0051028;mRNA transport;0.00416418757860339!GO:0001508;regulation of action potential;0.00424636742152961!GO:0051726;regulation of cell cycle;0.00435992140056782!GO:0005813;centrosome;0.00450924374973314!GO:0000323;lytic vacuole;0.00457570023287379!GO:0005764;lysosome;0.00457570023287379!GO:0007243;protein kinase cascade;0.00460654883708307!GO:0001505;regulation of neurotransmitter levels;0.00460654883708307!GO:0004386;helicase activity;0.00472805011690912!GO:0007272;ensheathment of neurons;0.00476814892758361!GO:0008366;axon ensheathment;0.00476814892758361!GO:0050811;GABA receptor binding;0.00495726627476983!GO:0044448;cell cortex part;0.00496680064568792!GO:0048487;beta-tubulin binding;0.00496680064568792!GO:0006904;vesicle docking during exocytosis;0.0050824261288065!GO:0005085;guanyl-nucleotide exchange factor activity;0.00509984122534015!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00513361925232613!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0051816645271035!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00545000188102468!GO:0030426;growth cone;0.0055626871858441!GO:0019904;protein domain specific binding;0.00564810548213089!GO:0005100;Rho GTPase activator activity;0.00583391781050893!GO:0004722;protein serine/threonine phosphatase activity;0.0059635750423743!GO:0003676;nucleic acid binding;0.00650940483551209!GO:0000074;regulation of progression through cell cycle;0.00669741966142836!GO:0031114;regulation of microtubule depolymerization;0.00674571139752201!GO:0007026;negative regulation of microtubule depolymerization;0.00674571139752201!GO:0030424;axon;0.00679992916946564!GO:0030427;site of polarized growth;0.00686120727575483!GO:0006470;protein amino acid dephosphorylation;0.00686198480037541!GO:0016481;negative regulation of transcription;0.0069255739202685!GO:0008286;insulin receptor signaling pathway;0.00695767063013138!GO:0031324;negative regulation of cellular metabolic process;0.00696993316601636!GO:0051920;peroxiredoxin activity;0.00697599379591471!GO:0019888;protein phosphatase regulator activity;0.00702005050388432!GO:0043284;biopolymer biosynthetic process;0.00720904920000044!GO:0016301;kinase activity;0.00726254323827219!GO:0012506;vesicle membrane;0.00739017607632091!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00739017607632091!GO:0004667;prostaglandin-D synthase activity;0.00739017607632091!GO:0050802;circadian sleep/wake cycle, sleep;0.00739017607632091!GO:0022410;circadian sleep/wake cycle process;0.00739017607632091!GO:0042749;regulation of circadian sleep/wake cycle;0.00739017607632091!GO:0008154;actin polymerization and/or depolymerization;0.007401078966598!GO:0005762;mitochondrial large ribosomal subunit;0.00741342370726495!GO:0000315;organellar large ribosomal subunit;0.00741342370726495!GO:0051540;metal cluster binding;0.00744666620260304!GO:0051536;iron-sulfur cluster binding;0.00744666620260304!GO:0008610;lipid biosynthetic process;0.00767975087579276!GO:0006695;cholesterol biosynthetic process;0.00769113600253015!GO:0043021;ribonucleoprotein binding;0.00771702341655647!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00787545011848405!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00845023506908191!GO:0006643;membrane lipid metabolic process;0.0084729041552478!GO:0007266;Rho protein signal transduction;0.00867057486568727!GO:0005869;dynactin complex;0.00884534509880629!GO:0007049;cell cycle;0.00898548159107328!GO:0051789;response to protein stimulus;0.00951232750462034!GO:0006986;response to unfolded protein;0.00951232750462034!GO:0048500;signal recognition particle;0.00968371906043348!GO:0006612;protein targeting to membrane;0.00995905319127178!GO:0000314;organellar small ribosomal subunit;0.0100930841687555!GO:0005763;mitochondrial small ribosomal subunit;0.0100930841687555!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.010289109265412!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.01045133038272!GO:0004674;protein serine/threonine kinase activity;0.0104863784728005!GO:0046578;regulation of Ras protein signal transduction;0.0105050690297098!GO:0046930;pore complex;0.0105757383123419!GO:0005815;microtubule organizing center;0.0107164329871294!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0107298860522204!GO:0019887;protein kinase regulator activity;0.0108994426830688!GO:0046870;cadmium ion binding;0.0110076521028157!GO:0005099;Ras GTPase activator activity;0.0110815312715587!GO:0030742;GTP-dependent protein binding;0.0110815312715587!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0110815312715587!GO:0005048;signal sequence binding;0.0111466145763835!GO:0048489;synaptic vesicle transport;0.0112022561267496!GO:0005868;cytoplasmic dynein complex;0.0112757914665067!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0113885033348701!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0113885033348701!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0114822881573081!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.0116080953372526!GO:0065002;intracellular protein transport across a membrane;0.011678692471384!GO:0030320;cellular monovalent inorganic anion homeostasis;0.011678692471384!GO:0055083;monovalent inorganic anion homeostasis;0.011678692471384!GO:0055064;chloride ion homeostasis;0.011678692471384!GO:0030644;cellular chloride ion homeostasis;0.011678692471384!GO:0008021;synaptic vesicle;0.011678692471384!GO:0004298;threonine endopeptidase activity;0.0120222756662312!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0123057294488455!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0129147691399669!GO:0031902;late endosome membrane;0.0129743005017775!GO:0003746;translation elongation factor activity;0.0131780521096431!GO:0006891;intra-Golgi vesicle-mediated transport;0.0132733288231975!GO:0001666;response to hypoxia;0.0136671831360348!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0141704303007759!GO:0033673;negative regulation of kinase activity;0.0146682042561961!GO:0006469;negative regulation of protein kinase activity;0.0146682042561961!GO:0031124;mRNA 3'-end processing;0.0146682042561961!GO:0006333;chromatin assembly or disassembly;0.0151448980570641!GO:0000059;protein import into nucleus, docking;0.0154941510532068!GO:0051168;nuclear export;0.015525061639729!GO:0019902;phosphatase binding;0.0158228299102056!GO:0001578;microtubule bundle formation;0.0159878523627447!GO:0051261;protein depolymerization;0.0161547933968058!GO:0050839;cell adhesion molecule binding;0.0162866586546728!GO:0042802;identical protein binding;0.0162866586546728!GO:0044433;cytoplasmic vesicle part;0.0163834838997872!GO:0005885;Arp2/3 protein complex;0.0165939222409075!GO:0008186;RNA-dependent ATPase activity;0.0166216035827698!GO:0007005;mitochondrion organization and biogenesis;0.0172488989368369!GO:0001558;regulation of cell growth;0.0176491396810798!GO:0030119;AP-type membrane coat adaptor complex;0.018101909253663!GO:0045892;negative regulation of transcription, DNA-dependent;0.018101909253663!GO:0051287;NAD binding;0.0188331603565513!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0190058059428622!GO:0006665;sphingolipid metabolic process;0.01902075489474!GO:0030041;actin filament polymerization;0.019146022173712!GO:0035035;histone acetyltransferase binding;0.0192074530408383!GO:0030658;transport vesicle membrane;0.0193095312258853!GO:0030258;lipid modification;0.0194299329648886!GO:0030131;clathrin adaptor complex;0.0195858695060968!GO:0003690;double-stranded DNA binding;0.0201942883912021!GO:0016859;cis-trans isomerase activity;0.0205282928449273!GO:0008090;retrograde axon cargo transport;0.0208878240987852!GO:0033596;TSC1-TSC2 complex;0.0208878240987852!GO:0033693;neurofilament bundle assembly;0.0208878240987852!GO:0051348;negative regulation of transferase activity;0.0211872728268201!GO:0009165;nucleotide biosynthetic process;0.021418966575966!GO:0006672;ceramide metabolic process;0.0219496388764269!GO:0046488;phosphatidylinositol metabolic process;0.0223854752042899!GO:0043681;protein import into mitochondrion;0.0225509729326281!GO:0016740;transferase activity;0.0242148208739395!GO:0042578;phosphoric ester hydrolase activity;0.0242186955278524!GO:0030030;cell projection organization and biogenesis;0.025904479278188!GO:0048858;cell projection morphogenesis;0.025904479278188!GO:0032990;cell part morphogenesis;0.025904479278188!GO:0007050;cell cycle arrest;0.0259197743948578!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0261732125312824!GO:0045047;protein targeting to ER;0.0261732125312824!GO:0051427;hormone receptor binding;0.0262306841849149!GO:0019894;kinesin binding;0.0268130343596746!GO:0030660;Golgi-associated vesicle membrane;0.0275370255501383!GO:0051539;4 iron, 4 sulfur cluster binding;0.0275437876030113!GO:0043067;regulation of programmed cell death;0.0276002048219276!GO:0042254;ribosome biogenesis and assembly;0.0283537130879735!GO:0030384;phosphoinositide metabolic process;0.0292388362868772!GO:0015629;actin cytoskeleton;0.0296958273227644!GO:0048154;S100 beta binding;0.0297724020574699!GO:0000287;magnesium ion binding;0.0297724020574699!GO:0031628;opioid receptor binding;0.0297724020574699!GO:0031852;mu-type opioid receptor binding;0.0297724020574699!GO:0016579;protein deubiquitination;0.0298673325698336!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0303062440743703!GO:0031371;ubiquitin conjugating enzyme complex;0.0313714692266424!GO:0019752;carboxylic acid metabolic process;0.0325215924142635!GO:0042981;regulation of apoptosis;0.033065100970107!GO:0046519;sphingoid metabolic process;0.033065100970107!GO:0043488;regulation of mRNA stability;0.0331392627266779!GO:0043487;regulation of RNA stability;0.0331392627266779!GO:0030137;COPI-coated vesicle;0.0331392627266779!GO:0030125;clathrin vesicle coat;0.0331392627266779!GO:0030665;clathrin coated vesicle membrane;0.0331392627266779!GO:0046474;glycerophospholipid biosynthetic process;0.0332041735575504!GO:0051252;regulation of RNA metabolic process;0.0332348316240546!GO:0030659;cytoplasmic vesicle membrane;0.0332348316240546!GO:0008022;protein C-terminus binding;0.0333831075088932!GO:0004860;protein kinase inhibitor activity;0.0333831075088932!GO:0006399;tRNA metabolic process;0.0338179454677209!GO:0019783;small conjugating protein-specific protease activity;0.0338179454677209!GO:0042026;protein refolding;0.0339878380868533!GO:0009066;aspartate family amino acid metabolic process;0.0340273737299184!GO:0065007;biological regulation;0.0342359012142393!GO:0019911;structural constituent of myelin sheath;0.0343414709632243!GO:0042552;myelination;0.0344317380569306!GO:0000062;acyl-CoA binding;0.034966253215153!GO:0019207;kinase regulator activity;0.0352223119901131!GO:0003713;transcription coactivator activity;0.0352223119901131!GO:0043086;negative regulation of catalytic activity;0.035443647831171!GO:0006091;generation of precursor metabolites and energy;0.0360529669475184!GO:0016272;prefoldin complex;0.0363241391723629!GO:0050435;beta-amyloid metabolic process;0.0372912554174641!GO:0009081;branched chain family amino acid metabolic process;0.0372952045201582!GO:0017166;vinculin binding;0.0378761918113066!GO:0004004;ATP-dependent RNA helicase activity;0.0378761918113066!GO:0003711;transcription elongation regulator activity;0.0380326969590654!GO:0046839;phospholipid dephosphorylation;0.0380714646133526!GO:0015682;ferric iron transport;0.0384029501133574!GO:0015091;ferric iron transmembrane transporter activity;0.0384029501133574!GO:0031643;positive regulation of myelination;0.0384029501133574!GO:0007006;mitochondrial membrane organization and biogenesis;0.038423027602224!GO:0030911;TPR domain binding;0.0384950275290709!GO:0032287;myelin maintenance in the peripheral nervous system;0.0390932452547933!GO:0032838;cell projection cytoplasm;0.0390932452547933!GO:0033081;regulation of T cell differentiation in the thymus;0.0390932452547933!GO:0043217;myelin maintenance;0.0390932452547933!GO:0060087;relaxation of vascular smooth muscle;0.0390932452547933!GO:0032839;dendrite cytoplasm;0.0390932452547933!GO:0016408;C-acyltransferase activity;0.03977977475424!GO:0006082;organic acid metabolic process;0.0402415876231741!GO:0004843;ubiquitin-specific protease activity;0.0402415876231741!GO:0035257;nuclear hormone receptor binding;0.0409916692074377!GO:0017091;AU-rich element binding;0.0412605199040064!GO:0050779;RNA destabilization;0.0412605199040064!GO:0000289;poly(A) tail shortening;0.0412605199040064!GO:0045296;cadherin binding;0.041371351147959!GO:0006383;transcription from RNA polymerase III promoter;0.0417441681995579!GO:0030139;endocytic vesicle;0.0417737497464726!GO:0031123;RNA 3'-end processing;0.0425544402399741!GO:0005856;cytoskeleton;0.0425544402399741!GO:0031109;microtubule polymerization or depolymerization;0.0426574814687134!GO:0000209;protein polyubiquitination;0.0430750928829104!GO:0051276;chromosome organization and biogenesis;0.04308338653599!GO:0016615;malate dehydrogenase activity;0.0441463800168019!GO:0042995;cell projection;0.0441463800168019!GO:0006611;protein export from nucleus;0.0447264170531711!GO:0007034;vacuolar transport;0.0454099620004963!GO:0065009;regulation of a molecular function;0.0470645592737416!GO:0008250;oligosaccharyl transferase complex;0.0470702762362818!GO:0004221;ubiquitin thiolesterase activity;0.0487079381892269!GO:0021782;glial cell development;0.0493279615002444!GO:0022008;neurogenesis;0.0495408041946109!GO:0005667;transcription factor complex;0.0496734083372674!GO:0008312;7S RNA binding;0.0496734083372674!GO:0008180;signalosome;0.0497947296323175!GO:0030641;cellular hydrogen ion homeostasis;0.0498777022389599
 |sample_id=10182
 |sample_note=biological replicate
@@ Line 76: / Line 100: @@
 |sample_tissue=locus coeruleus
 |top_motifs=REST:3.4612153696;SOX2:3.26847257765;MYFfamily:3.25720988543;NHLH1,2:3.1926523195;MTF1:3.17597833668;SOX5:3.11723342931;RREB1:3.07495197278;ZFP161:2.97161365241;HIC1:2.82044729224;DBP:2.73683031051;MED-1{core}:2.63268911072;NFIX:2.61926454577;PRDM1:2.61461677855;PRRX1,2:2.55195947251;MTE{core}:2.54256120786;ATF2:2.49698064446;RFX1:2.48625688943;SOX{8,9,10}:2.47400080459;RFX2..5_RFXANK_RFXAP:2.41887829559;ZBTB6:2.409318411;TFAP2B:2.37338760627;CUX2:2.37268629176;NANOG:2.29772577751;LMO2:2.24834892161;GFI1B:2.22705347954;OCT4_SOX2{dimer}:2.22424281469;EGR1..3:2.202735277;GATA4:2.19212214499;NKX3-2:2.18006628059;GTF2I:2.17794203561;KLF4:2.16808997816;PAX6:2.15119172651;SMAD1..7,9:2.14486352473;HOXA9_MEIS1:2.13430002242;FOXP3:2.11279044092;TGIF1:2.05958290483;HOX{A6,A7,B6,B7}:2.05454003262;PATZ1:2.05242099696;SOX17:1.99883892868;JUN:1.99090069329;HBP1_HMGB_SSRP1_UBTF:1.92926540026;MZF1:1.91456556428;MAZ:1.76236469253;EP300:1.75830779643;BREu{core}:1.73542754936;FOXD3:1.69792833156;SP1:1.69294373999;ZNF384:1.63683783841;PAX5:1.63298467978;GCM1,2:1.61007581336;NKX6-1,2:1.60414865484;AHR_ARNT_ARNT2:1.5899397087;EBF1:1.56392946264;XBP1:1.54243101565;PDX1:1.51199414622;STAT2,4,6:1.50946317993;POU6F1:1.47505309352;FOXM1:1.47251600387;ZNF423:1.45915454318;TFDP1:1.41282739735;LEF1_TCF7_TCF7L1,2:1.3953982831;BPTF:1.35868645554;MYBL2:1.32370666205;FOXP1:1.28525526481;RBPJ:1.23371814522;POU5F1:1.23295099008;NR3C1:1.19865923251;STAT1,3:1.17381931286;NRF1:1.1734158979;RORA:1.16502925818;POU3F1..4:1.15345431815;IKZF2:1.1448834086;ZIC1..3:1.13654104034;TFAP2{A,C}:1.13142209846;CDC5L:1.10772719417;ARID5B:1.06533030224;TLX1..3_NFIC{dimer}:1.02253655765;VSX1,2:1.01491920051;FOXQ1:0.996437319196;NKX2-3_NKX2-5:0.970222462504;HOX{A4,D4}:0.909130809355;ONECUT1,2:0.847569930825;FOX{D1,D2}:0.83548915154;AR:0.764225752728;SREBF1,2:0.761159280039;CRX:0.73850932352;MAFB:0.707446416353;ZNF143:0.689192998852;LHX3,4:0.663356160293;ADNP_IRX_SIX_ZHX:0.64009222103;ZBTB16:0.628451345664;HMGA1,2:0.61175983417;PAX4:0.504485105883;CREB1:0.471432125052;GTF2A1,2:0.443717262151;FOXO1,3,4:0.440905925087;ESRRA:0.421624454881;T:0.420956320079;FOXN1:0.418598892451;NKX3-1:0.398190782075;ATF5_CREB3:0.317350056504;XCPE1{core}:0.310050967761;FOX{F1,F2,J1}:0.300845394414;IRF7:0.282013065057;FOX{I1,J2}:0.253852631567;ATF4:0.21054774742;GFI1:0.210192538507;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.155148317182;NFIL3:0.131394840093;EVI1:0.130683118449;PAX2:0.122302678184;HMX1:0.11609045008;GZF1:0.098230400282;MEF2{A,B,C,D}:0.0280197190496;PBX1:0.016836579756;NFY{A,B,C}:0.00548663563213;ALX1:-0.00715185644759;ZEB1:-0.0111020490585;HAND1,2:-0.0526798276773;NR5A1,2:-0.0748315978365;NFATC1..3:-0.0776234939237;IRF1,2:-0.0928309631718;SPZ1:-0.0944717758489;TFCP2:-0.0963175302361;NFE2L2:-0.098030067777;MYOD1:-0.119451471581;TOPORS:-0.120797505289;FOXL1:-0.178153747349;AIRE:-0.194314743359;ZNF238:-0.241518959283;NR1H4:-0.271014641218;NFE2L1:-0.275409052166;CEBPA,B_DDIT3:-0.277649403806;UFEwm:-0.282534065905;PAX3,7:-0.287809898827;CDX1,2,4:-0.307843555284;NFE2:-0.316750580281;ATF6:-0.329981772314;POU1F1:-0.339848685699;PITX1..3:-0.380874743071;NKX2-1,4:-0.390399578058;ALX4:-0.393494358076;GATA6:-0.469785895947;TBX4,5:-0.473235721751;YY1:-0.534181808042;FOXA2:-0.534259096111;SPI1:-0.577917426206;NANOG{mouse}:-0.581700490288;TP53:-0.591658027452;TBP:-0.596892931839;TLX2:-0.601202886153;TEF:-0.65698837616;ETS1,2:-0.659064052531;HNF4A_NR2F1,2:-0.666558495347;IKZF1:-0.68158762729;TFAP4:-0.702841512057;HNF1A:-0.73889951789;DMAP1_NCOR{1,2}_SMARC:-0.75438384131;NKX2-2,8:-0.77344025755;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.781022444692;SPIB:-0.806621209063;bHLH_family:-0.81142766039;HSF1,2:-0.88055871951;SNAI1..3:-0.905126291912;PAX8:-0.907077101738;HIF1A:-0.93185683147;TEAD1:-0.937193329778;ESR1:-0.940216968836;BACH2:-0.942597842913;FOS_FOS{B,L1}_JUN{B,D}:-0.948073139394;FOSL2:-0.990727282183;PAX1,9:-1.01080500855;SRF:-1.09195916311;E2F1..5:-1.2223350223;NFKB1_REL_RELA:-1.22604444369;HLF:-1.23533488092;ELK1,4_GABP{A,B1}:-1.24650392647;ELF1,2,4:-1.32985581098;RUNX1..3:-1.34702588647;RXR{A,B,G}:-1.3620364759;POU2F1..3:-1.36997617815;ZNF148:-1.43932916314;NR6A1:-1.52446640412;MYB:-1.53379996216;HES1:-1.59129664022;TAL1_TCF{3,4,12}:-1.71925284182;GLI1..3:-1.83532879427;PPARG:-1.96568154983;RXRA_VDR{dimer}:-2.33995500824;HOX{A5,B5}:-2.40760983777;STAT5{A,B}:-2.55389876892;EN1,2:-2.80531514899
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10182-103D2;search_select_hide=table117:FF:10182-103D2
 }}

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FF:10182-103D2: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:25, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0