FFCP PHASE1:Hg19::chr10:120355149..120355165,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2834 | |EntrezGene=2834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4464 | |HGNC=4464 | ||
|TSSclassifier=strong | |||
|UniProt=P49683,A5JUU5 | |UniProt=P49683,A5JUU5 | ||
|association_with_transcript=0bp_to_ENST00000239032,NM_004248,uc001ldp.1_5end | |association_with_transcript=0bp_to_ENST00000239032,NM_004248,uc001ldp.1_5end | ||
|cluster_id=chr10:120355149..120355165,- | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_1_at_PRLHR_5end | |description=CAGE_peak_1_at_PRLHR_5end | ||
|id=chr10:120355149..120355165,- | |id=chr10:120355149..120355165,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.16e-13;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003296;2.07e-36;4!UBERON:0010133;2.07e-36;4!UBERON:0001894;5.86e-21;7!UBERON:0002148;9.35e-20;2!UBERON:0006331;9.35e-20;2!UBERON:0009662;9.35e-20;2!UBERON:0000007;2.48e-19;2!UBERON:0001905;6.51e-19;2!UBERON:0001875;6.51e-19;2!UBERON:0002757;6.51e-19;2!UBERON:0010134;6.51e-19;2!UBERON:0005408;6.51e-19;2!UBERON:0006514;6.51e-19;2!UBERON:0001899;6.51e-19;2!UBERON:0002680;1.51e-16;9!UBERON:0000125;1.51e-16;9!UBERON:0002308;1.51e-16;9!UBERON:0001895;1.51e-16;9!UBERON:0000988;1.70e-13;3!UBERON:0000955;1.71e-13;68!UBERON:0000073;1.70e-12;53!UBERON:0002616;1.70e-12;53!UBERON:0004733;1.82e-12;12!UBERON:0002028;1.82e-12;12!UBERON:0004732;1.60e-11;13!UBERON:0001017;4.47e-11;75!UBERON:0006834;1.13e-10;1!UBERON:0002780;1.82e-10;41!UBERON:0001890;1.82e-10;41!UBERON:0005795;2.50e-10;1!UBERON:0001016;6.13e-10;83!UBERON:0002784;6.24e-10;4!UBERON:0002021;4.06e-08;5!UBERON:0002298;3.54e-07;6!UBERON:0002037;6.67e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.41e-80!57;UBERON:0005068!2.41e-80!57;UBERON:0006241!2.41e-80!57;UBERON:0007135!2.41e-80!57;UBERON:0001017!8.95e-74!82;UBERON:0005743!6.86e-73!86;UBERON:0000955!7.06e-71!69;UBERON:0006238!7.06e-71!69;UBERON:0002616!7.79e-70!59;UBERON:0002780!1.60e-68!41;UBERON:0001890!1.60e-68!41;UBERON:0006240!1.60e-68!41;UBERON:0000073!4.80e-68!94;UBERON:0001016!4.80e-68!94;UBERON:0003080!1.03e-66!42;UBERON:0003075!2.71e-55!86;UBERON:0007284!2.71e-55!86;UBERON:0002020!6.38e-55!34;UBERON:0003528!6.38e-55!34;UBERON:0007023!1.26e-54!115;UBERON:0001893!2.68e-54!34;UBERON:0001869!1.09e-53!32;UBERON:0002346!2.37e-52!90;UBERON:0002791!1.19e-51!33;UBERON:0003056!3.04e-46!61;UBERON:0002619!3.30e-41!22;UBERON:0001950!6.49e-41!20;UBERON:0000033!4.93e-39!123;UBERON:0000153!1.67e-38!129;UBERON:0007811!1.67e-38!129;UBERON:0000956!7.47e-36!25;UBERON:0000203!7.47e-36!25;UBERON:0004121!8.69e-33!169;UBERON:0000924!9.41e-32!173;UBERON:0006601!9.41e-32!173;UBERON:0002308!7.86e-21!9;UBERON:0000125!7.86e-21!9;UBERON:0002420!3.21e-20!9;UBERON:0007245!3.21e-20!9;UBERON:0010009!3.21e-20!9;UBERON:0010011!3.21e-20!9;UBERON:0000454!3.21e-20!9;UBERON:0000025!2.12e-18!194;UBERON:0001871!1.07e-16!7;UBERON:0001894!2.04e-15!7;UBERON:0006222!2.04e-15!7;UBERON:0009663!5.30e-15!7;UBERON:0001872!8.70e-15!5;UBERON:0003076!1.01e-14!15;UBERON:0003057!1.01e-14!15;UBERON:0004111!2.06e-14!241;UBERON:0003296!2.62e-13!4;UBERON:0010133!2.62e-13!4;UBERON:0000200!5.51e-12!6;UBERON:0000477!7.01e-12!286;UBERON:0000369!7.34e-12!4;UBERON:0002435!7.34e-12!4;UBERON:0000204!7.34e-12!4;UBERON:0010082!7.34e-12!4;UBERON:0004733!8.11e-12!12;UBERON:0002028!8.11e-12!12;UBERON:0007277!8.11e-12!12;UBERON:0004732!8.06e-11!13;UBERON:0000988!3.62e-10!3;UBERON:0002021!5.77e-10!5;UBERON:0000475!5.96e-10!365;UBERON:0000064!1.00e-09!219;UBERON:0000483!1.56e-09!309;UBERON:0005383!1.66e-09!3;UBERON:0005382!1.66e-09!3;UBERON:0002298!2.01e-09!8;UBERON:0000349!2.04e-09!5;UBERON:0000119!2.45e-09!312;UBERON:0002771!5.73e-09!3;UBERON:0002680!1.14e-08!9;UBERON:0001895!1.14e-08!9;UBERON:0010092!1.14e-08!9;UBERON:0002148!1.01e-07!2;UBERON:0009662!1.01e-07!2;UBERON:0000007!1.38e-07!2;UBERON:0000062!1.50e-07!511;UBERON:0001875!1.78e-07!2;UBERON:0006514!1.78e-07!2;UBERON:0001905!2.14e-07!2;UBERON:0002757!2.14e-07!2;UBERON:0010134!2.14e-07!2;UBERON:0002784!2.14e-07!2;UBERON:0005408!2.14e-07!2;UBERON:0001899!2.14e-07!2;UBERON:0000922!4.00e-07!612;UBERON:0001876!5.33e-07!2;UBERON:0001873!7.18e-07!2;UBERON:0010122!7.18e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.07e-36;4!UBERON:0010133;2.07e-36;4!UBERON:0001894;5.86e-21;7!UBERON:0002148;9.35e-20;2!UBERON:0006331;9.35e-20;2!UBERON:0009662;9.35e-20;2!UBERON:0000007;2.48e-19;2!UBERON:0001905;6.51e-19;2!UBERON:0001875;6.51e-19;2!UBERON:0002757;6.51e-19;2!UBERON:0010134;6.51e-19;2!UBERON:0005408;6.51e-19;2!UBERON:0006514;6.51e-19;2!UBERON:0001899;6.51e-19;2!UBERON:0002680;1.51e-16;9!UBERON:0000125;1.51e-16;9!UBERON:0002308;1.51e-16;9!UBERON:0001895;1.51e-16;9!UBERON:0000988;1.70e-13;3!UBERON:0000955;1.71e-13;68!UBERON:0000073;1.70e-12;53!UBERON:0002616;1.70e-12;53!UBERON:0004733;1.82e-12;12!UBERON:0002028;1.82e-12;12!UBERON:0004732;1.60e-11;13!UBERON:0001017;4.47e-11;75!UBERON:0006834;1.13e-10;1!UBERON:0002780;1.82e-10;41!UBERON:0001890;1.82e-10;41!UBERON:0005795;2.50e-10;1!UBERON:0001016;6.13e-10;83!UBERON:0002784;6.24e-10;4!UBERON:0002021;4.06e-08;5!UBERON:0002298;3.54e-07;6!UBERON:0002037;6.67e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.62e-36,4;UBERON:0010133,2.62e-36,4;UBERON:0000955,4.76e-23,68;UBERON:0006238,4.76e-23,68;UBERON:0001016,1.68e-22,89;UBERON:0000073,3.68e-22,53;UBERON:0002616,3.68e-22,53;UBERON:0001017,4.85e-22,81;UBERON:0001894,6.68e-21,7;UBERON:0006222,6.68e-21,7;UBERON:0001049,6.79e-21,56;UBERON:0005068,6.79e-21,56;UBERON:0006241,6.79e-21,56;UBERON:0007135,6.79e-21,56;UBERON:0002148,9.38e-20,2;UBERON:0006331,9.38e-20,2;UBERON:0009662,9.38e-20,2;UBERON:0000007,2.38e-19,2;UBERON:0001875,4.96e-19,2;UBERON:0006514,4.96e-19,2;UBERON:0001905,8.59e-19,2;UBERON:0002757,8.59e-19,2;UBERON:0010134,8.59e-19,2;UBERON:0005408,8.59e-19,2;UBERON:0001899,8.59e-19,2;UBERON:0002680,1.34e-16,9;UBERON:0000125,1.34e-16,9;UBERON:0002308,1.34e-16,9;UBERON:0001895,1.34e-16,9;UBERON:0010092,1.34e-16,9;UBERON:0007023,2.01e-15,114;UBERON:0003075,9.46e-14,82;UBERON:0007284,9.46e-14,82;UBERON:0000988,1.70e-13,3;UBERON:0002346,4.98e-13,86;UBERON:0002780,1.04e-12,41;UBERON:0001890,1.04e-12,41;UBERON:0003080,1.04e-12,41;UBERON:0006240,1.04e-12,41;UBERON:0004733,1.66e-12,12;UBERON:0002028,1.66e-12,12;UBERON:0007277,1.66e-12,12;UBERON:0004732,1.47e-11,13;UBERON:0006834,1.08e-10,1;UBERON:0004121,1.19e-10,171;UBERON:0000924,1.19e-10,171;UBERON:0006601,1.19e-10,171;UBERON:0010371,1.83e-10,104;UBERON:0003076,4.85e-10,15;UBERON:0003057,4.85e-10,15;UBERON:0002784,7.16e-10,4;UBERON:0003528,6.29e-09,34;UBERON:0002020,6.29e-09,34;UBERON:0011216,9.46e-09,223;UBERON:0003056,2.73e-08,61;UBERON:0002021,4.69e-08,5;UBERON:0010314,7.53e-08,132;UBERON:0002298,3.55e-07,6;UBERON:0002037,6.11e-07,6;UBERON:0006215,6.11e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0.874813840149763,0,0.885741385813839,0.482385754501632,0,1.76926815889959,1.18219047581419,1.09692698576986,0,0,4.00141344219745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.696418755514666,0,0,0,0,0,0,5.14784993585894,0,0,0,0,0,0,0,1.20084057741958,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,5.55376927319298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0,0.443716206147409,0.931446044120752,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09209638192014,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.478901577171454,1.02558182120378,1.51243017733031,0.622415272177961,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.945526184657525,0.781078098613847,0.620060389503552,0.570742291745161,0.546974809018219,0,0,0,0,1.07140367175657,1.3451348888753,1.21393120847326,4.32558163567465,0,0,0,0.475788130837822,0.920818829879887,0,0,0,0.628462359664008,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,16.7568756359008,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5670703278402,1.22068853494722,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,0,0,0,0,0,0.874813840149763,0,0.885741385813839,0.482385754501632,0,1.76926815889959,1.18219047581419,1.09692698576986,0,0,4.00141344219745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.696418755514666,0,0,0,0,0,0,5.14784993585894,0,0,0,0,0,0,0,1.20084057741958,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32709321450791,5.55376927319298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.500763722825999,0,0.443716206147409,0.931446044120752,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09209638192014,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.478901577171454,1.02558182120378,1.51243017733031,0.622415272177961,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.945526184657525,0.781078098613847,0.620060389503552,0.570742291745161,0.546974809018219,0,0,0,0,1.07140367175657,1.3451348888753,1.21393120847326,4.32558163567465,0,0,0,0.475788130837822,0.920818829879887,0,0,0,0.628462359664008,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,16.7568756359008,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5670703278402,1.22068853494722,0,0,0 | ||
|short_description=p1@PRLHR | |short_description=p1@PRLHR | ||
}} | }} |
Latest revision as of 16:24, 16 September 2015
Short description: | p1@PRLHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRLHR_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | 0bp_to_ENST00000239032, NM_004248, uc001ldp.1_5end |
EntrezGene: | PRLHR |
HGNC: | 4464 |
UniProt: | P49683A5JUU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data