FFCP PHASE1:Hg19::chr1:114258267..114258270,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:114258267..114258270,-
|short_description=p5@PHTF1
|description=CAGE_peak_5_at_PHTF1_5end
|association_with_transcript=-433bp_to_ENST00000474926,uc001edm.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10745 | |EntrezGene=10745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8939 | |HGNC=8939 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVX8 | |UniProt=Q9BVX8 | ||
|association_with_transcript=-433bp_to_ENST00000474926,uc001edm.2_5end | |||
|cluster_id=chr1:114258267..114258270,- | |||
|description=CAGE_peak_5_at_PHTF1_5end | |||
|id=chr1:114258267..114258270,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.73e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,8.36e-09,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.83e-16!82;UBERON:0005743!9.19e-16!86;UBERON:0001049!2.56e-15!57;UBERON:0005068!2.56e-15!57;UBERON:0006241!2.56e-15!57;UBERON:0007135!2.56e-15!57;UBERON:0000073!7.29e-15!94;UBERON:0001016!7.29e-15!94;UBERON:0000955!1.14e-14!69;UBERON:0006238!1.14e-14!69;UBERON:0002780!5.57e-14!41;UBERON:0001890!5.57e-14!41;UBERON:0006240!5.57e-14!41;UBERON:0002616!6.67e-14!59;UBERON:0002020!1.23e-13!34;UBERON:0003528!1.23e-13!34;UBERON:0001869!2.80e-13!32;UBERON:0003080!3.38e-13!42;UBERON:0001893!3.67e-13!34;UBERON:0002791!1.03e-12!33;UBERON:0002346!2.92e-11!90;UBERON:0000956!2.39e-10!25;UBERON:0000203!2.39e-10!25;UBERON:0003075!4.18e-10!86;UBERON:0007284!4.18e-10!86;UBERON:0002619!6.45e-10!22;UBERON:0001950!1.19e-08!20;UBERON:0003056!2.29e-08!61;UBERON:0007023!3.68e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.88e-10;22!UBERON:0002791;2.23e-08;32!UBERON:0000956;2.24e-08;25!UBERON:0000203;2.24e-08;25!UBERON:0001869;2.33e-08;32!UBERON:0003528;3.68e-07;34!UBERON:0002020;3.68e-07;34!UBERON:0001893;6.67e-07;34!UBERON:0001950;7.73e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,9.07e-10,22;UBERON:0001049,2.20e-09,56;UBERON:0005068,2.20e-09,56;UBERON:0006241,2.20e-09,56;UBERON:0007135,2.20e-09,56;UBERON:0002791,4.52e-09,32;UBERON:0001869,4.52e-09,32;UBERON:0000073,7.81e-09,53;UBERON:0002616,7.81e-09,53;UBERON:0000956,2.08e-08,25;UBERON:0000203,2.08e-08,25;UBERON:0003528,2.10e-08,34;UBERON:0002020,2.10e-08,34;UBERON:0001893,2.10e-08,34;UBERON:0002346,2.71e-08,86;UBERON:0001017,7.14e-08,81;UBERON:0002780,9.66e-08,41;UBERON:0001890,9.66e-08,41;UBERON:0003080,9.66e-08,41;UBERON:0006240,9.66e-08,41;UBERON:0001954,7.05e-07,2;UBERON:0003022,7.05e-07,2;UBERON:0002421,7.05e-07,2;UBERON:0002600,7.05e-07,2;UBERON:0003075,7.48e-07,82;UBERON:0007284,7.48e-07,82;UBERON:0001950,8.74e-07,20 | |||
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| ||
|short_description=p5@PHTF1 | |||
}} | }} |
Latest revision as of 05:59, 16 September 2015
Short description: | p5@PHTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PHTF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -433bp_to_ENST00000474926, uc001edm.2_5end |
EntrezGene: | PHTF1 |
HGNC: | 8939 |
UniProt: | Q9BVX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 8.36e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 9.07e-10 | 22 |
neural tube | 2.20e-09 | 56 |
neural rod | 2.20e-09 | 56 |
future spinal cord | 2.20e-09 | 56 |
neural keel | 2.20e-09 | 56 |
regional part of telencephalon | 4.52e-09 | 32 |
cerebral hemisphere | 4.52e-09 | 32 |
regional part of nervous system | 7.81e-09 | 53 |
regional part of brain | 7.81e-09 | 53 |
cerebral cortex | 2.08e-08 | 25 |
pallium | 2.08e-08 | 25 |
brain grey matter | 2.10e-08 | 34 |
gray matter | 2.10e-08 | 34 |
telencephalon | 2.10e-08 | 34 |
neurectoderm | 2.71e-08 | 86 |
central nervous system | 7.14e-08 | 81 |
regional part of forebrain | 9.66e-08 | 41 |
forebrain | 9.66e-08 | 41 |
anterior neural tube | 9.66e-08 | 41 |
future forebrain | 9.66e-08 | 41 |
Ammon's horn | 7.05e-07 | 2 |
lobe parts of cerebral cortex | 7.05e-07 | 2 |
hippocampal formation | 7.05e-07 | 2 |
limbic lobe | 7.05e-07 | 2 |
neural plate | 7.48e-07 | 82 |
presumptive neural plate | 7.48e-07 | 82 |
neocortex | 8.74e-07 | 20 |