FFCP PHASE1:Hg19::chr1:155232276..155232286,+: Difference between revisions
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|id=chr1:155232276..155232286,+
|short_description=p@chr1:155232276..155232286,+
|description=CAGE_peak_at_chr1:155232276..155232286,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:155232276..155232286,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr1:155232276..155232286,+ | |||
|id=chr1:155232276..155232286,+ | |||
|ontology_enrichment_celltype=CL:0002603!2.64e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002262;5.96e-34;2!CL:1000398;5.96e-34;2!CL:0000182;8.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,7.05e-34,2;CL:1000398,7.05e-34,2;CL:0000182,8.38e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10 | |||
|ontology_enrichment_disease=DOID:4960!4.19e-09!1;DOID:0070004!4.19e-09!1;DOID:6193!4.54e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.90e-09!8;UBERON:0002038!6.22e-09!1;UBERON:0009661!6.22e-09!1;UBERON:0003135!5.42e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.96e-34;2!UBERON:0003497;5.96e-34;2!UBERON:0003909;5.96e-34;2!UBERON:0003835;5.96e-34;2!UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0001280;3.66e-23;3!UBERON:0004647;3.66e-23;3!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0003513;9.43e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0001281,7.05e-34,2;UBERON:0003497,7.05e-34,2;UBERON:0003909,7.05e-34,2;UBERON:0003835,7.05e-34,2;UBERON:0003135,4.86e-25,11;UBERON:0001280,4.09e-23,3;UBERON:0004647,4.09e-23,3;UBERON:0005171,4.09e-23,3;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0003513,9.89e-11,7;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p@chr1:155232276..155232286,+ | |||
}} | }} |
Latest revision as of 22:16, 27 July 2015
Short description: | p@chr1:155232276..155232286, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155232276..155232286, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 7.05e-34 | 2 |
endothelial cell of hepatic sinusoid | 7.05e-34 | 2 |
hepatocyte | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
hepatic sinusoid | 7.05e-34 | 2 |
abdomen blood vessel | 7.05e-34 | 2 |
sinusoid | 7.05e-34 | 2 |
abdominal segment blood vessel | 7.05e-34 | 2 |
male reproductive organ | 4.86e-25 | 11 |
liver parenchyma | 4.09e-23 | 3 |
liver lobule | 4.09e-23 | 3 |
hepatic duct | 4.09e-23 | 3 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
bile duct | 2.74e-12 | 6 |
digestive system duct | 2.74e-12 | 6 |
trunk blood vessel | 9.89e-11 | 7 |
biliary system | 1.21e-08 | 9 |
biliary tree | 1.21e-08 | 9 |
biliary bud | 1.21e-08 | 9 |
body cavity | 7.30e-07 | 46 |