FFCP PHASE1:Hg19::chr4:160024245..160024256,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:160024245..160024256,+ | |||
|coexpression_cluster_id=C4388 | |coexpression_cluster_id=C4388 | ||
|description=CAGE_peak_at_chr4:160024245..160024256,+ | |description=CAGE_peak_at_chr4:160024245..160024256,+ | ||
|id=chr4:160024245..160024256,+ | |id=chr4:160024245..160024256,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.73e-14;33!CL:0002057;1.73e-14;33!CL:0000094;2.53e-10;8!CL:0000576;6.78e-10;48!CL:0000766;1.07e-09;69!CL:0000473;3.05e-09;39!CL:0000234;3.05e-09;39!CL:0000081;4.35e-07;11 | |ontology_enrichment_celltype=CL:0002057!6.96e-16!42;CL:0000860!9.27e-14!45;CL:0000766!3.41e-12!76;CL:0000557!1.52e-10!71;CL:0000839!2.86e-10!70;CL:0000738!4.07e-10!140;CL:0002031!5.10e-09!124;CL:0002009!1.40e-08!65;CL:0000763!5.35e-08!112;CL:0000049!5.35e-08!112;CL:0000037!6.21e-08!172;CL:0000566!6.21e-08!172;CL:0002194!6.78e-08!63;CL:0000576!6.78e-08!63;CL:0000040!6.78e-08!63;CL:0000559!6.78e-08!63;CL:0002032!2.73e-07!165;CL:0000837!2.73e-07!165 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.73e-14;33!CL:0002057;1.73e-14;33!CL:0000094;2.53e-10;8!CL:0000576;6.78e-10;48!CL:0000766;1.07e-09;69!CL:0000473;3.05e-09;39!CL:0000234;3.05e-09;39!CL:0000081;4.35e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.62e-21,72;CL:0000738,8.45e-18,136;CL:0000860,2.19e-17,42;CL:0002057,2.19e-17,42;CL:0000763,6.79e-17,108;CL:0000049,6.79e-17,108;CL:0000037,2.34e-16,168;CL:0000839,2.57e-16,66;CL:0000557,6.59e-16,67;CL:0002032,1.83e-15,161;CL:0000837,1.83e-15,161;CL:0000988,1.11e-14,177;CL:0000473,3.08e-14,48;CL:0000234,3.08e-14,48;CL:0002031,5.36e-14,120;CL:0002009,1.77e-11,61;CL:0002194,5.61e-11,59;CL:0000576,5.61e-11,59;CL:0000040,5.61e-11,59;CL:0000559,5.61e-11,59;CL:0000094,1.74e-10,8;CL:0002087,1.81e-09,115;CL:0000081,3.36e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.92e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;3.00e-20;22!UBERON:0001950;9.15e-18;20!UBERON:0000956;3.18e-17;25!UBERON:0000203;3.18e-17;25!UBERON:0001869;2.13e-12;32!UBERON:0002791;4.26e-12;32!UBERON:0002780;7.38e-12;41!UBERON:0001890;7.38e-12;41!UBERON:0003528;1.09e-11;34!UBERON:0002020;1.09e-11;34!UBERON:0001893;1.30e-11;34!UBERON:0000073;3.87e-09;53!UBERON:0002616;3.87e-09;53!UBERON:0000200;5.19e-09;6!UBERON:0001872;3.17e-07;5 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.79e-13!41;UBERON:0001890!5.79e-13!41;UBERON:0006240!5.79e-13!41;UBERON:0001049!7.10e-13!57;UBERON:0005068!7.10e-13!57;UBERON:0006241!7.10e-13!57;UBERON:0007135!7.10e-13!57;UBERON:0007023!9.23e-13!115;UBERON:0003080!3.29e-12!42;UBERON:0002020!5.83e-12!34;UBERON:0003528!5.83e-12!34;UBERON:0001893!1.31e-11!34;UBERON:0001869!2.84e-11!32;UBERON:0002791!4.01e-11!33;UBERON:0001017!1.28e-10!82;UBERON:0002616!1.40e-10!59;UBERON:0002619!1.42e-10!22;UBERON:0000956!8.48e-10!25;UBERON:0000203!8.48e-10!25;UBERON:0005743!1.61e-09!86;UBERON:0002371!2.21e-09!80;UBERON:0001950!2.24e-09!20;UBERON:0000955!2.72e-09!69;UBERON:0006238!2.72e-09!69;UBERON:0002390!3.75e-09!102;UBERON:0003061!3.75e-09!102;UBERON:0001474!7.18e-09!86;UBERON:0003075!2.55e-08!86;UBERON:0007284!2.55e-08!86;UBERON:0002346!5.92e-08!90;UBERON:0000073!6.27e-08!94;UBERON:0001016!6.27e-08!94;UBERON:0003056!9.90e-08!61;UBERON:0002193!2.26e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.00e-20;22!UBERON:0001950;9.15e-18;20!UBERON:0000956;3.18e-17;25!UBERON:0000203;3.18e-17;25!UBERON:0001869;2.13e-12;32!UBERON:0002791;4.26e-12;32!UBERON:0002780;7.38e-12;41!UBERON:0001890;7.38e-12;41!UBERON:0003528;1.09e-11;34!UBERON:0002020;1.09e-11;34!UBERON:0001893;1.30e-11;34!UBERON:0000073;3.87e-09;53!UBERON:0002616;3.87e-09;53!UBERON:0000200;5.19e-09;6!UBERON:0001872;3.17e-07;5 | |||
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| ||
|short_description=p@chr4:160024245..160024256,+ | |short_description=p@chr4:160024245..160024256,+ | ||
}} | }} |
Latest revision as of 02:52, 30 July 2015
Short description: | p@chr4:160024245..160024256, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:160024245..160024256, + |
Coexpression cluster: | C4388_Wilms_Neutrophils_Eosinophils_Mast_Reticulocytes_extraskeletal_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.62e-21 | 72 |
leukocyte | 8.45e-18 | 136 |
classical monocyte | 2.19e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.19e-17 | 42 |
myeloid cell | 6.79e-17 | 108 |
common myeloid progenitor | 6.79e-17 | 108 |
hematopoietic stem cell | 2.34e-16 | 168 |
myeloid lineage restricted progenitor cell | 2.57e-16 | 66 |
granulocyte monocyte progenitor cell | 6.59e-16 | 67 |
hematopoietic oligopotent progenitor cell | 1.83e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-15 | 161 |
hematopoietic cell | 1.11e-14 | 177 |
defensive cell | 3.08e-14 | 48 |
phagocyte | 3.08e-14 | 48 |
hematopoietic lineage restricted progenitor cell | 5.36e-14 | 120 |
macrophage dendritic cell progenitor | 1.77e-11 | 61 |
monopoietic cell | 5.61e-11 | 59 |
monocyte | 5.61e-11 | 59 |
monoblast | 5.61e-11 | 59 |
promonocyte | 5.61e-11 | 59 |
granulocyte | 1.74e-10 | 8 |
nongranular leukocyte | 1.81e-09 | 115 |
blood cell | 3.36e-07 | 11 |