FFCP PHASE1:Hg19::chr17:46690839..46690884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3218 | |EntrezGene=3218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |HGNC=5119 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498634_5end | |association_with_transcript=0bp_to_ENST00000498634_5end | ||
|cluster_id=chr17:46690839..46690884,- | |||
|description=CAGE_peak_1_at_HOXB8_5end | |description=CAGE_peak_1_at_HOXB8_5end | ||
|id=chr17:46690839..46690884,- | |id=chr17:46690839..46690884,- | ||
|ontology_enrichment_celltype=CL:1000497;2.53e-16;17!CL:0002518;2.53e-16;17!CL:1000449;3.55e-15;15!CL:0002681;5.70e-12;12!CL:0002584;5.70e-12;12!CL:1000507;6.05e-12;10!CL:1000494;6.05e-12;10!CL:0002139;3.63e-08;24!CL:0000136;9.36e-08;13!CL:0002138;2.79e-07;6!CL:1000746;4.51e-07;7!CL:1000612;4.51e-07;7 | |ontology_enrichment_celltype=CL:1000497!1.46e-13!18;CL:0002518!1.46e-13!18;CL:1000449!1.28e-12!16;CL:0002681!2.58e-10!13;CL:0002584!2.58e-10!13;CL:1000507!4.75e-10!12;CL:1000494!4.75e-10!12;CL:0000066!9.38e-10!254;CL:0000136!1.12e-07!15;CL:0000213!9.20e-07!57;CL:0000215!9.20e-07!57 | ||
| | |ontology_enrichment_celltype_v019=CL:1000497;2.53e-16;17!CL:0002518;2.53e-16;17!CL:1000449;3.55e-15;15!CL:0002681;5.70e-12;12!CL:0002584;5.70e-12;12!CL:1000507;6.05e-12;10!CL:1000494;6.05e-12;10!CL:0002139;3.63e-08;24!CL:0000136;9.36e-08;13!CL:0002138;2.79e-07;6!CL:1000746;4.51e-07;7!CL:1000612;4.51e-07;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:1000497,1.71e-16,17;CL:0002518,1.71e-16,17;CL:1000449,3.63e-15,15;CL:0002681,5.63e-12,12;CL:0002584,5.63e-12,12;CL:1000507,5.73e-12,10;CL:1000494,5.73e-12,10;CL:0002078,1.51e-09,45;CL:0000136,2.38e-09,15;CL:0000066,1.09e-08,253;CL:0002139,3.65e-08,24;CL:0000115,7.51e-08,36;CL:0005020,2.84e-07,6;CL:0002138,2.84e-07,6;CL:0005022,2.84e-07,6;CL:0000213,3.17e-07,58;CL:0000215,3.17e-07,58;CL:1000746,5.21e-07,7;CL:1000612,5.21e-07,7 | ||
|ontology_enrichment_uberon=UBERON:0000489;6.19e-18;29!UBERON:0006555;3.55e-15;15!UBERON:0004819;3.55e-15;15!UBERON:0001285;3.55e-15;15!UBERON:0007684;3.55e-15;15!UBERON:0002113;2.68e-13;24!UBERON:0011143;2.68e-13;24!UBERON:0006554;3.68e-13;30!UBERON:0001008;3.68e-13;30!UBERON:0001851;4.51e-12;15!UBERON:0001225;5.70e-12;12!UBERON:0008987;5.70e-12;12!UBERON:0004211;6.05e-12;10!UBERON:0009773;6.05e-12;10!UBERON:0001231;6.05e-12;10!UBERON:0004810;6.05e-12;10!UBERON:0001473;2.07e-09;8!UBERON:0004536;2.07e-09;8!UBERON:0006558;2.07e-09;8!UBERON:0000353;7.12e-09;15!UBERON:0002465;4.12e-07;10!UBERON:0000074;4.51e-07;7!UBERON:0001229;4.51e-07;7 | |ontology_enrichment_development_v019=CL:0005022;2.79e-07;6 | ||
|ontology_enrichment_disease=DOID:0050687!3.31e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.92e-17!32;UBERON:0001008!3.17e-14!45;UBERON:0000080!5.14e-14!18;UBERON:0002120!5.14e-14!18;UBERON:0004875!5.14e-14!18;UBERON:0005721!5.14e-14!18;UBERON:0005754!5.14e-14!18;UBERON:0007297!5.14e-14!18;UBERON:0002113!8.57e-14!27;UBERON:0003918!8.57e-14!27;UBERON:0005095!8.57e-14!27;UBERON:0007687!8.57e-14!27;UBERON:0006554!1.56e-13!44;UBERON:0006555!1.62e-13!17;UBERON:0005103!1.62e-13!17;UBERON:0000083!1.62e-13!17;UBERON:0009201!1.62e-13!17;UBERON:0004819!1.62e-13!17;UBERON:0006553!1.62e-13!17;UBERON:0003074!1.62e-13!17;UBERON:0003060!1.62e-13!17;UBERON:0004876!6.21e-13!20;UBERON:0003887!1.17e-12!21;UBERON:0004211!1.28e-12!16;UBERON:0001285!1.28e-12!16;UBERON:0007684!1.28e-12!16;UBERON:0003220!1.28e-12!16;UBERON:0004208!1.28e-12!16;UBERON:0003064!7.43e-12!37;UBERON:0000058!2.24e-11!26;UBERON:0003886!3.01e-11!63;UBERON:0009569!1.24e-10!113;UBERON:0005177!1.57e-10!107;UBERON:0002100!1.96e-10!216;UBERON:0002417!2.43e-10!61;UBERON:0000916!2.43e-10!61;UBERON:0001225!2.58e-10!13;UBERON:0008987!2.58e-10!13;UBERON:0001851!4.20e-10!16;UBERON:0009773!4.75e-10!12;UBERON:0001231!4.75e-10!12;UBERON:0004810!4.75e-10!12;UBERON:0002553!3.07e-09!70;UBERON:0000464!5.73e-09!104;UBERON:0005172!8.43e-08!55;UBERON:0005173!8.43e-08!55;UBERON:0000353!1.57e-07!17;UBERON:0003104!2.38e-07!238;UBERON:0009142!2.38e-07!238;UBERON:0001473!3.40e-07!8;UBERON:0004536!3.40e-07!8;UBERON:0006558!3.40e-07!8;UBERON:0000466!5.40e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;6.19e-18;29!UBERON:0006555;3.55e-15;15!UBERON:0004819;3.55e-15;15!UBERON:0001285;3.55e-15;15!UBERON:0007684;3.55e-15;15!UBERON:0002113;2.68e-13;24!UBERON:0011143;2.68e-13;24!UBERON:0006554;3.68e-13;30!UBERON:0001008;3.68e-13;30!UBERON:0001851;4.51e-12;15!UBERON:0001225;5.70e-12;12!UBERON:0008987;5.70e-12;12!UBERON:0004211;6.05e-12;10!UBERON:0009773;6.05e-12;10!UBERON:0001231;6.05e-12;10!UBERON:0004810;6.05e-12;10!UBERON:0001473;2.07e-09;8!UBERON:0004536;2.07e-09;8!UBERON:0006558;2.07e-09;8!UBERON:0000353;7.12e-09;15!UBERON:0002465;4.12e-07;10!UBERON:0000074;4.51e-07;7!UBERON:0001229;4.51e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,6.08e-20,31;UBERON:0006555,2.07e-16,16;UBERON:0004819,2.07e-16,16;UBERON:0002113,2.97e-15,26;UBERON:0003918,2.97e-15,26;UBERON:0011143,2.97e-15,26;UBERON:0005095,2.97e-15,26;UBERON:0007687,2.97e-15,26;UBERON:0004211,3.63e-15,15;UBERON:0009773,3.63e-15,15;UBERON:0001231,3.63e-15,15;UBERON:0001285,3.63e-15,15;UBERON:0007684,3.63e-15,15;UBERON:0004208,3.63e-15,15;UBERON:0001851,4.79e-12,15;UBERON:0001225,5.63e-12,12;UBERON:0008987,5.63e-12,12;UBERON:0004810,5.73e-12,10;UBERON:0001008,2.21e-11,48;UBERON:0006554,1.31e-10,47;UBERON:0002417,1.47e-10,60;UBERON:0000916,1.47e-10,60;UBERON:0009569,5.88e-10,112;UBERON:0001473,2.04e-09,8;UBERON:0004536,2.04e-09,8;UBERON:0006558,2.04e-09,8;UBERON:0000080,6.17e-09,9;UBERON:0002120,6.17e-09,9;UBERON:0004875,6.17e-09,9;UBERON:0005721,6.17e-09,9;UBERON:0005754,6.17e-09,9;UBERON:0007297,6.17e-09,9;UBERON:0000353,7.06e-09,15;UBERON:0002100,2.72e-08,199;UBERON:0005103,3.12e-08,8;UBERON:0000083,3.12e-08,8;UBERON:0009201,3.12e-08,8;UBERON:0006553,3.12e-08,8;UBERON:0003074,3.12e-08,8;UBERON:0003060,3.12e-08,8;UBERON:0005177,3.17e-08,101;UBERON:0005172,2.02e-07,54;UBERON:0005173,2.02e-07,54;UBERON:0003064,3.80e-07,28;UBERON:0002465,4.09e-07,10;UBERON:0010532,5.21e-07,7;UBERON:0000074,5.21e-07,7;UBERON:0001229,5.21e-07,7;UBERON:0001230,5.21e-07,7;UBERON:0003220,5.21e-07,7;UBERON:0005749,5.21e-07,7;UBERON:0004199,5.21e-07,7;UBERON:0004209,5.21e-07,7;UBERON:0004198,5.21e-07,7;UBERON:0004876,6.56e-07,11 | |||
|phase1_expression=0.726713517082227,8.13581990785736,5.07435854745496,2.00146596706261,8.93922188854576,0,20.2639902534648,0,5.22371256399677,1.22866968250754,0.697801167972428,0,0,7.92104658944298,4.30816588446291,0,0,2.19093027116212,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,6.71883573840255,6.04802646567407,7.02913286805807,8.45941565929209,15.9657142200888,2.4406205754817,5.51494620518803,6.48113558305408,5.44728342532887,4.26605807989723,5.40535106319947,0,0,5.31285057398181,0,0,0,0,0,0.397227542439656,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,2.54062756938062,5.87172493218824,4.04682360920329,4.6348766211742,0,0,0,0,0,7.28129089550421,7.90479955997862,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,4.21940830603166,3.99491721160914,0.252433774244115,0.184099797284599,0,0,0.302256294682921,0,0,0,0,0,0,1.04574548582567,0,0,0,0,0,0,0.464367928031979,0,1.65629520055781,1.18009283054671,2.41011029883482,2.20587945464788,2.17879444092406,2.13543557199987,1.34831308160164,0.196221465125346,0.769494313892781,0,0,0.8231480226628,0,0,0,0,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,4.90845922387651,6.01881166349594,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761974731506028,0.763976851116555,1.17217447210047,0,0.822619941626588,4.20480280981484,1.42913216315289,0,0,0,0.129271715757778,0,0,0,0,0,9.92943924162948,0.266422179016099,0,0.542621605391443,0.823240336780769,1.30294473717494,0.355391948742546,0,0.602878754119172,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0.289562613335158,0,1.96967059563885,0,0,0,0,0,0,0,0,0,0,0,0,3.6807447515742,6.5022167737758,5.15403545029498,0,0,0,0,0,0,1.03473071292505,0,0,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.248107807818777,1.68808170616869,0.841980283299221,1.66580894032411,4.09365799253363,2.0911009748669,0,5.85996836450091,1.42049380250502,5.4203922969114,0.519254429183621,4.41599438147845,4.59265908448164,0.601519410909855,0.184161977871793,0,0,0,3.60959690325929,2.84956747286335,14.1182958451834,20.4594914514565,3.37765212457202,20.4720091327614,15.4785271801629,5.18198198645135,21.5918153766405,8.12839312631558,7.02365683396795,9.17554582962138,12.4661401339309,12.7608610191642,0,0,0,0,0,1.33953315142039,0.732555718546747,0.41254749960294,0,0,0,0.096670718292122,1.07834031980251,0.307007349452259,0.551346289938122,0,0.145016693914229,1.36362603865761,0.356128142586949,0,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,1.79128453917934,0.855877976067841,0,0,1.2591072030832,0.54907405947211,2.00281083987667,0,0,0,0,2.19342140668156,1.05650146756755,0,0,0,0,0,0,1.73632660280006,2.62357900818653,0.608731130888112,0,0.281695602532241,3.44187245289724,0.88424136911809,0.35667105148125,0,0,0,0,0,0,0,0,2.07116361708914,0.86101074534246,3.36942951335251,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.747768497892312,0,0.490080431962063,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,1.69291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,3.03401304373784,0.334330152832435,23.8674363317387,0,0,0,0,0,0,0,0,1.39473591775749,1.93398740871803,0,9.20418142519393,0,0,0,0,0,1.28236427328014,0,0,0,0,0,0,0,3.62499787717397,0,0,0.945550727071745,0,0,0,0,0,0,0,0,0,1.52513848926586,1.11538995422883,0.615602068030377,0,0,0,0.869178975376065,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,2.53197677433632,0,0.282706142867882,0.216388639742091,1.99052386215701,1.59223616106011,7.33236173920351,0,0,0.104421949505455,0.202203398942031,0,0,0,0,12.1390189767046,7.10251925128903,0,0,0.063186579628488,0,0.72581733978073,1.99396161812156,5.29587129400798,1.56966459203613,1.19472429772959,4.26914319044689,2.63481878724963,0,0,0.522355239482415,20.6177468525596,10.6631340132402,0.483781656445426,0.438535902517113,0.656923656425674,0,1.235585773681,0,3.97421581475578,1.9871461170299,0,2.54216797555244,0,0.213452994739353,0.19980960958213,2.88180834308212,18.4403919827124,26.7688196664665,0.576219191952599,2.73355578243952,1.17847017308398,7.61063554012239,8.15902201236199,0.713987523454252,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,4.65983798109815,0,0,0,3.54338933453096,0,0,0,0,0.137539436597234,0,0,0,0,0,6.93490224232944,11.3826456252946,0,1.6135860539956,0.383830394638891,0,0,0,0,0,0,1.19730191562487,0,15.8460860260442,10.0847761452912,0,0,0,0,2.05304205461195,0,0.640724475406168,0.314408610199332,0,0,0.197611631897944,0,0,2.1760712134779,1.7548292581589,5.82056595850577,17.0493767969098,0.628216385000937,0,0,0,0,0.332787154610557,3.04272374412779,0,0.124980407962107,2.88133323329131,3.14011866899464,1.41159491818903,0,2.17381542916238,2.53733164907686,0.934853239388898,5.54805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,5.0509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| ||
|short_description=p1@HOXB8 | |short_description=p1@HOXB8 | ||
}} | }} |
Latest revision as of 07:31, 25 September 2015
Short description: | p1@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXB8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498634_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.71e-16 | 17 |
kidney epithelial cell | 1.71e-16 | 17 |
epithelial cell of nephron | 3.63e-15 | 15 |
kidney cortical cell | 5.63e-12 | 12 |
renal cortical epithelial cell | 5.63e-12 | 12 |
kidney tubule cell | 5.73e-12 | 10 |
nephron tubule epithelial cell | 5.73e-12 | 10 |
meso-epithelial cell | 1.51e-09 | 45 |
fat cell | 2.38e-09 | 15 |
epithelial cell | 1.09e-08 | 253 |
endothelial cell of vascular tree | 3.65e-08 | 24 |
endothelial cell | 7.51e-08 | 36 |
lymphangioblast | 2.84e-07 | 6 |
endothelial cell of lymphatic vessel | 2.84e-07 | 6 |
vascular lymphangioblast | 2.84e-07 | 6 |
lining cell | 3.17e-07 | 58 |
barrier cell | 3.17e-07 | 58 |
glomerular cell | 5.21e-07 | 7 |
kidney corpuscule cell | 5.21e-07 | 7 |