FFCP PHASE1:Hg19::chr1:183538389..183538403,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:183538389..183538403,-
|short_description=p10@NCF2
|description=CAGE_peak_10_at_NCF2_5end
|association_with_transcript=-29bp_to_ENST00000419402,ENST0000042...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4688 | |EntrezGene=4688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |HGNC=7661 | ||
|TSSclassifier=strong | |||
|UniProt=B1ALB7,B1ALB6 | |UniProt=B1ALB7,B1ALB6 | ||
|association_with_transcript=-29bp_to_ENST00000419402,ENST00000420553_5end | |||
|cluster_id=chr1:183538389..183538403,- | |||
|coexpression_cluster_id=C3913 | |||
|description=CAGE_peak_10_at_NCF2_5end | |||
|id=chr1:183538389..183538403,- | |||
|ontology_enrichment_celltype=CL:0000066!4.07e-19!254;CL:0002368!1.87e-15!13;CL:0002076!6.94e-14!43;CL:0002202!1.69e-09!9;CL:0002632!1.69e-09!9;CL:0000223!2.54e-08!59;CL:0002681!5.88e-07!13;CL:0002584!5.88e-07!13;CL:1000449!8.18e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.26e-41;13!CL:0002202;1.36e-24;9!CL:0002632;1.36e-24;9!CL:0002076;1.02e-15;42!CL:0002166;4.51e-15;3!CL:0002328;8.44e-15;3!CL:0000307;9.47e-15;3!CL:0002577;5.10e-14;3!CL:1000507;1.12e-10;10!CL:1000494;1.12e-10;10!CL:0002536;2.99e-10;2!CL:0000244;3.94e-10;4!CL:0000731;3.94e-10;4!CL:1000449;6.25e-10;15!CL:0002681;5.93e-09;12!CL:0002584;5.93e-09;12!CL:1000497;1.08e-08;17!CL:0002518;1.08e-08;17!CL:0000082;3.19e-08;19!CL:0000349;5.36e-08;19!CL:0002621;4.24e-07;3!CL:0000239;9.62e-07;3!CL:1000615;9.62e-07;3!CL:0002306;9.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.21e-41,13;CL:0002202,1.07e-24,9;CL:0002632,1.07e-24,9;CL:0002076,3.04e-21,42;CL:0000066,1.23e-20,253;CL:0002166,4.51e-15,3;CL:0002328,7.89e-15,3;CL:0000068,9.06e-15,3;CL:0000069,9.06e-15,3;CL:0000307,9.06e-15,3;CL:0000377,9.06e-15,3;CL:0000223,1.94e-14,58;CL:0002577,4.27e-14,3;CL:1000507,1.44e-10,10;CL:1000494,1.44e-10,10;CL:0000244,3.09e-10,4;CL:0000731,3.09e-10,4;CL:0002536,3.21e-10,2;CL:1000449,8.29e-10,15;CL:0002681,7.38e-09,12;CL:0002584,7.38e-09,12;CL:1000497,1.38e-08,17;CL:0002518,1.38e-08,17;CL:0000082,2.97e-08,19;CL:0000349,4.96e-08,19;CL:0002621,4.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;9.47e-15;3!CL:0000223;2.10e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!3.74e-09!104;UBERON:0005911!1.36e-08!82;UBERON:0004119!3.26e-08!169;UBERON:0000925!3.26e-08!169;UBERON:0006595!3.26e-08!169;UBERON:0001004!6.01e-08!72;UBERON:0000065!6.21e-08!53;UBERON:0000466!7.28e-08!126;UBERON:0006554!8.33e-08!44;UBERON:0001008!1.59e-07!45;UBERON:0007196!5.46e-07!14;UBERON:0001558!5.46e-07!14;UBERON:0001225!5.88e-07!13;UBERON:0008987!5.88e-07!13;UBERON:0008947!6.16e-07!38;UBERON:0003258!6.16e-07!38;UBERON:0004211!8.18e-07!16;UBERON:0001285!8.18e-07!16;UBERON:0007684!8.18e-07!16;UBERON:0003220!8.18e-07!16;UBERON:0004208!8.18e-07!16;UBERON:0005153!8.47e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;8.44e-15;3!UBERON:0002031;8.44e-15;3!UBERON:0007196;2.29e-14;15!UBERON:0001558;2.29e-14;15!UBERON:0004807;3.13e-12;22!UBERON:0001708;2.03e-11;4!UBERON:0008895;2.03e-11;4!UBERON:0004211;1.12e-10;10!UBERON:0009773;1.12e-10;10!UBERON:0001231;1.12e-10;10!UBERON:0004810;1.12e-10;10!UBERON:0001987;1.23e-10;4!UBERON:0005911;1.36e-10;36!UBERON:0000065;1.69e-10;44!UBERON:0006554;4.12e-10;30!UBERON:0001008;4.12e-10;30!UBERON:0006555;6.25e-10;15!UBERON:0004819;6.25e-10;15!UBERON:0001285;6.25e-10;15!UBERON:0007684;6.25e-10;15!UBERON:0011159;3.22e-09;5!UBERON:0005178;3.23e-09;34!UBERON:0002224;3.23e-09;34!UBERON:0002185;4.66e-09;5!UBERON:0000486;5.77e-09;12!UBERON:0001225;5.93e-09;12!UBERON:0008987;5.93e-09;12!UBERON:0005181;1.54e-08;35!UBERON:0004802;3.19e-08;19!UBERON:0000115;3.19e-08;19!UBERON:0000365;3.37e-08;5!UBERON:0000072;1.94e-07;37!UBERON:0001851;4.15e-07;15!UBERON:0000353;4.15e-07;15!UBERON:0001949;4.24e-07;3!UBERON:0002048;5.17e-07;22!UBERON:0000117;5.17e-07;22!UBERON:0000171;5.17e-07;22!UBERON:0000170;5.17e-07;22!UBERON:0005910;6.63e-07;6!UBERON:0006853;9.62e-07;3!UBERON:0007685;9.62e-07;3!UBERON:0004134;9.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,7.89e-15,3;UBERON:0002031,7.89e-15,3;UBERON:0007196,1.99e-14,15;UBERON:0001558,1.99e-14,15;UBERON:0006554,7.71e-13,47;UBERON:0001008,1.62e-12,48;UBERON:0000065,1.07e-11,54;UBERON:0001708,2.03e-11,4;UBERON:0008895,2.03e-11,4;UBERON:0004119,9.69e-11,160;UBERON:0000925,9.69e-11,160;UBERON:0006595,9.69e-11,160;UBERON:0001987,1.08e-10,4;UBERON:0004340,1.08e-10,4;UBERON:0001004,1.13e-10,74;UBERON:0004810,1.44e-10,10;UBERON:0004211,8.29e-10,15;UBERON:0009773,8.29e-10,15;UBERON:0001231,8.29e-10,15;UBERON:0001285,8.29e-10,15;UBERON:0007684,8.29e-10,15;UBERON:0004208,8.29e-10,15;UBERON:0005178,1.59e-09,34;UBERON:0002224,1.59e-09,34;UBERON:0004807,2.46e-09,28;UBERON:0011159,3.22e-09,5;UBERON:0005181,3.31e-09,35;UBERON:0006555,3.69e-09,16;UBERON:0004819,3.69e-09,16;UBERON:0002185,4.47e-09,5;UBERON:0001225,7.38e-09,12;UBERON:0008987,7.38e-09,12;UBERON:0008947,2.36e-08,38;UBERON:0003258,2.36e-08,38;UBERON:0000365,2.78e-08,5;UBERON:0004802,2.97e-08,19;UBERON:0000115,2.97e-08,19;UBERON:0005631,6.84e-08,14;UBERON:0000158,6.84e-08,14;UBERON:0005177,7.10e-08,101;UBERON:0005911,7.44e-08,82;UBERON:0010188,9.57e-08,6;UBERON:0002539,9.57e-08,6;UBERON:0008816,9.57e-08,6;UBERON:0001949,4.86e-07,3;UBERON:0002048,4.87e-07,22;UBERON:0000117,4.87e-07,22;UBERON:0000171,4.87e-07,22;UBERON:0000170,4.87e-07,22;UBERON:0005597,4.87e-07,22;UBERON:0000118,4.87e-07,22;UBERON:0001851,4.92e-07,15;UBERON:0000353,4.92e-07,15;UBERON:0005910,5.66e-07,6;UBERON:0009569,8.92e-07,112 | |||
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| ||
|short_description=p10@NCF2 | |||
}} | }} |
Latest revision as of 03:32, 19 September 2015
Short description: | p10@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NCF2_5end |
Coexpression cluster: | C3913_gall_bile_Small_lung_Bronchial_Tracheal_large |
Association with transcript: | -29bp_to_ENST00000419402, ENST00000420553_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | B1ALB7B1ALB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.21e-41 | 13 |
epithelial cell of tracheobronchial tree | 1.07e-24 | 9 |
epithelial cell of lower respiratory tract | 1.07e-24 | 9 |
endo-epithelial cell | 3.04e-21 | 42 |
epithelial cell | 1.23e-20 | 253 |
epithelial cell of Malassez | 4.51e-15 | 3 |
bronchial epithelial cell | 7.89e-15 | 3 |
duct epithelial cell | 9.06e-15 | 3 |
branched duct epithelial cell | 9.06e-15 | 3 |
tracheal epithelial cell | 9.06e-15 | 3 |
tracheoblast | 9.06e-15 | 3 |
endodermal cell | 1.94e-14 | 58 |
placental epithelial cell | 4.27e-14 | 3 |
kidney tubule cell | 1.44e-10 | 10 |
nephron tubule epithelial cell | 1.44e-10 | 10 |
transitional epithelial cell | 3.09e-10 | 4 |
urothelial cell | 3.09e-10 | 4 |
amniotic epithelial cell | 3.21e-10 | 2 |
epithelial cell of nephron | 8.29e-10 | 15 |
kidney cortical cell | 7.38e-09 | 12 |
renal cortical epithelial cell | 7.38e-09 | 12 |
kidney cell | 1.38e-08 | 17 |
kidney epithelial cell | 1.38e-08 | 17 |
epithelial cell of lung | 2.97e-08 | 19 |
extraembryonic cell | 4.96e-08 | 19 |
gingival epithelial cell | 4.86e-07 | 3 |