FFCP PHASE1:Hg19::chr2:202563351..202563376,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000483841_5end | |association_with_transcript=0bp_to_ENST00000483841_5end | ||
|cluster_id=chr2:202563351..202563376,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_1_at_MPP4_5end | |description=CAGE_peak_1_at_MPP4_5end | ||
|id=chr2:202563351..202563376,- | |id=chr2:202563351..202563376,- | ||
|ontology_enrichment_celltype=CL:0000222!3.98e-30!119;CL:0002139!1.38e-24!24;CL:0000055!6.90e-23!180;CL:0000359!5.87e-20!32;CL:0000192!1.61e-19!42;CL:0000514!1.61e-19!42;CL:0000071!5.44e-19!18;CL:0002546!5.44e-19!18;CL:0000680!1.11e-17!57;CL:0000056!1.11e-17!57;CL:0000355!1.11e-17!57;CL:0000187!1.07e-16!54;CL:0000115!1.09e-16!35;CL:0000183!1.82e-15!59;CL:0000220!1.52e-14!246;CL:0002321!3.39e-14!248;CL:0000213!6.36e-14!57;CL:0000215!6.36e-14!57;CL:0000393!9.44e-14!60;CL:0000211!9.44e-14!60;CL:0002078!2.49e-13!44;CL:0002620!2.28e-12!23;CL:0000057!1.08e-11!75;CL:0000144!6.98e-11!625;CL:0002539!8.03e-11!10;CL:1000413!2.00e-10!9;CL:0002371!9.35e-10!591;CL:0000548!1.76e-09!679;CL:0000004!1.76e-09!679;CL:0000255!1.76e-09!679;CL:0000012!3.37e-09!682;CL:0002543!1.02e-07!6;CL:0002544!1.08e-07!6;CL:0005020!3.82e-07!6;CL:0002138!3.82e-07!6;CL:0005022!3.82e-07!6;CL:0000048!5.17e-07!430 | |ontology_enrichment_celltype=CL:0000222!3.98e-30!119;CL:0002139!1.38e-24!24;CL:0000055!6.90e-23!180;CL:0000359!5.87e-20!32;CL:0000192!1.61e-19!42;CL:0000514!1.61e-19!42;CL:0000071!5.44e-19!18;CL:0002546!5.44e-19!18;CL:0000680!1.11e-17!57;CL:0000056!1.11e-17!57;CL:0000355!1.11e-17!57;CL:0000187!1.07e-16!54;CL:0000115!1.09e-16!35;CL:0000183!1.82e-15!59;CL:0000220!1.52e-14!246;CL:0002321!3.39e-14!248;CL:0000213!6.36e-14!57;CL:0000215!6.36e-14!57;CL:0000393!9.44e-14!60;CL:0000211!9.44e-14!60;CL:0002078!2.49e-13!44;CL:0002620!2.28e-12!23;CL:0000057!1.08e-11!75;CL:0000144!6.98e-11!625;CL:0002539!8.03e-11!10;CL:1000413!2.00e-10!9;CL:0002371!9.35e-10!591;CL:0000548!1.76e-09!679;CL:0000004!1.76e-09!679;CL:0000255!1.76e-09!679;CL:0000012!3.37e-09!682;CL:0002543!1.02e-07!6;CL:0002544!1.08e-07!6;CL:0005020!3.82e-07!6;CL:0002138!3.82e-07!6;CL:0005022!3.82e-07!6;CL:0000048!5.17e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.23e-37;24!CL:0000071;4.08e-28;18!CL:0000115;1.49e-26;36!CL:0000359;1.11e-24;32!CL:0002539;1.55e-17;10!CL:1000413;1.65e-16;9!CL:0002078;3.72e-15;45!CL:0000192;5.95e-15;43!CL:0002543;4.63e-12;6!CL:0002544;5.04e-12;6!CL:0000213;7.33e-12;58!CL:0000215;7.33e-12;58!CL:0002138;4.94e-11;6!CL:0002620;1.32e-08;23!CL:0000187;1.39e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.86e-38,24;CL:0000222,3.50e-33,121;CL:0000115,3.43e-30,36;CL:0000071,9.43e-29,18;CL:0002546,9.43e-29,18;CL:0000359,4.31e-26,32;CL:0002078,2.82e-24,45;CL:0000213,5.06e-20,58;CL:0000215,5.06e-20,58;CL:0000192,3.60e-19,43;CL:0000514,3.60e-19,43;CL:0002539,1.48e-17,10;CL:1000413,7.17e-17,9;CL:0000680,4.39e-15,58;CL:0000056,4.39e-15,58;CL:0000355,4.39e-15,58;CL:0000187,1.90e-13,55;CL:0002321,5.70e-13,250;CL:0002543,3.35e-12,6;CL:0002544,3.69e-12,6;CL:0000393,1.84e-11,61;CL:0000211,1.84e-11,61;CL:0005020,3.25e-11,6;CL:0002138,3.25e-11,6;CL:0005022,3.25e-11,6;CL:0002620,2.17e-08,23;CL:0000076,3.79e-07,63;CL:0002618,9.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.08e-28;18!CL:0000514;5.95e-15;43!CL:0005022;4.94e-11;6!CL:0000355;2.23e-08;58!CL:0000222;1.62e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!1.05e-08!14 | |ontology_enrichment_disease=DOID:2394!1.05e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.08e-09;14!DOID:0060084;5.04e-07;3!DOID:127;5.04e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.67e-09,14;DOID:0060084,4.92e-07,3;DOID:127,4.92e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.28e-41!69;UBERON:0002049!9.82e-39!79;UBERON:0007798!9.82e-39!79;UBERON:0001981!2.91e-35!60;UBERON:0007500!2.91e-35!60;UBERON:0004537!2.91e-35!60;UBERON:0006965!2.91e-35!60;UBERON:0001637!2.67e-32!42;UBERON:0003509!2.67e-32!42;UBERON:0004572!2.67e-32!42;UBERON:0004535!9.95e-28!110;UBERON:0004573!1.77e-27!33;UBERON:0004571!1.77e-27!33;UBERON:0001009!3.56e-27!113;UBERON:0004872!8.98e-27!84;UBERON:0000490!2.24e-20!138;UBERON:0001986!5.44e-19!18;UBERON:0004638!5.44e-19!18;UBERON:0004852!5.44e-19!18;UBERON:0003914!5.77e-19!118;UBERON:0000487!6.02e-18!22;UBERON:0000947!6.44e-18!21;UBERON:0010191!6.44e-18!21;UBERON:0004290!2.02e-16!70;UBERON:0001134!1.27e-15!61;UBERON:0002036!1.27e-15!61;UBERON:0003082!1.27e-15!61;UBERON:0006914!7.66e-15!25;UBERON:0002385!1.06e-14!63;UBERON:0001015!1.06e-14!63;UBERON:0000383!1.06e-14!63;UBERON:0000914!1.34e-13!83;UBERON:0002329!1.34e-13!83;UBERON:0003077!1.34e-13!83;UBERON:0003059!1.34e-13!83;UBERON:0007282!1.34e-13!83;UBERON:0009618!1.34e-13!83;UBERON:0007285!1.34e-13!83;UBERON:0000486!6.45e-12!82;UBERON:0004237!8.03e-11!10;UBERON:0004695!8.03e-11!10;UBERON:0002111!8.03e-11!10;UBERON:0004178!8.03e-11!10;UBERON:0003915!2.00e-10!9;UBERON:0004700!2.00e-10!9;UBERON:0001917!2.00e-10!9;UBERON:0001135!9.62e-10!15;UBERON:0001473!1.20e-08!8;UBERON:0004536!1.20e-08!8;UBERON:0006558!1.20e-08!8;UBERON:0002199!1.24e-07!45;UBERON:0002416!1.24e-07!45;UBERON:0000119!3.14e-07!312 | |ontology_enrichment_uberon=UBERON:0000055!1.28e-41!69;UBERON:0002049!9.82e-39!79;UBERON:0007798!9.82e-39!79;UBERON:0001981!2.91e-35!60;UBERON:0007500!2.91e-35!60;UBERON:0004537!2.91e-35!60;UBERON:0006965!2.91e-35!60;UBERON:0001637!2.67e-32!42;UBERON:0003509!2.67e-32!42;UBERON:0004572!2.67e-32!42;UBERON:0004535!9.95e-28!110;UBERON:0004573!1.77e-27!33;UBERON:0004571!1.77e-27!33;UBERON:0001009!3.56e-27!113;UBERON:0004872!8.98e-27!84;UBERON:0000490!2.24e-20!138;UBERON:0001986!5.44e-19!18;UBERON:0004638!5.44e-19!18;UBERON:0004852!5.44e-19!18;UBERON:0003914!5.77e-19!118;UBERON:0000487!6.02e-18!22;UBERON:0000947!6.44e-18!21;UBERON:0010191!6.44e-18!21;UBERON:0004290!2.02e-16!70;UBERON:0001134!1.27e-15!61;UBERON:0002036!1.27e-15!61;UBERON:0003082!1.27e-15!61;UBERON:0006914!7.66e-15!25;UBERON:0002385!1.06e-14!63;UBERON:0001015!1.06e-14!63;UBERON:0000383!1.06e-14!63;UBERON:0000914!1.34e-13!83;UBERON:0002329!1.34e-13!83;UBERON:0003077!1.34e-13!83;UBERON:0003059!1.34e-13!83;UBERON:0007282!1.34e-13!83;UBERON:0009618!1.34e-13!83;UBERON:0007285!1.34e-13!83;UBERON:0000486!6.45e-12!82;UBERON:0004237!8.03e-11!10;UBERON:0004695!8.03e-11!10;UBERON:0002111!8.03e-11!10;UBERON:0004178!8.03e-11!10;UBERON:0003915!2.00e-10!9;UBERON:0004700!2.00e-10!9;UBERON:0001917!2.00e-10!9;UBERON:0001135!9.62e-10!15;UBERON:0001473!1.20e-08!8;UBERON:0004536!1.20e-08!8;UBERON:0006558!1.20e-08!8;UBERON:0002199!1.24e-07!45;UBERON:0002416!1.24e-07!45;UBERON:0000119!3.14e-07!312 | ||
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| ||
|short_description=p1@MPP4 | |short_description=p1@MPP4 | ||
}} | }} |
Latest revision as of 13:55, 19 September 2015
Short description: | p1@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MPP4_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000483841_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.86e-38 | 24 |
mesodermal cell | 3.50e-33 | 121 |
endothelial cell | 3.43e-30 | 36 |
blood vessel endothelial cell | 9.43e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.43e-29 | 18 |
vascular associated smooth muscle cell | 4.31e-26 | 32 |
meso-epithelial cell | 2.82e-24 | 45 |
lining cell | 5.06e-20 | 58 |
barrier cell | 5.06e-20 | 58 |
smooth muscle cell | 3.60e-19 | 43 |
smooth muscle myoblast | 3.60e-19 | 43 |
aortic smooth muscle cell | 1.48e-17 | 10 |
endothelial cell of artery | 7.17e-17 | 9 |
muscle precursor cell | 4.39e-15 | 58 |
myoblast | 4.39e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.39e-15 | 58 |
muscle cell | 1.90e-13 | 55 |
embryonic cell | 5.70e-13 | 250 |
vein endothelial cell | 3.35e-12 | 6 |
aortic endothelial cell | 3.69e-12 | 6 |
electrically responsive cell | 1.84e-11 | 61 |
electrically active cell | 1.84e-11 | 61 |
lymphangioblast | 3.25e-11 | 6 |
endothelial cell of lymphatic vessel | 3.25e-11 | 6 |
vascular lymphangioblast | 3.25e-11 | 6 |
skin fibroblast | 2.17e-08 | 23 |
squamous epithelial cell | 3.79e-07 | 63 |
endothelial cell of umbilical vein | 9.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.67e-09 | 14 |
cell type benign neoplasm | 4.92e-07 | 3 |
leiomyoma | 4.92e-07 | 3 |