FFCP PHASE1:Hg19::chr5:58571425..58571440,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=215bp_to_uc003jsd.1_5end | |association_with_transcript=215bp_to_uc003jsd.1_5end | ||
|cluster_id=chr5:58571425..58571440,- | |||
|coexpression_cluster_id=C4508 | |coexpression_cluster_id=C4508 | ||
|description=CAGE_peak_3_at_uc003jsd.1_5end | |description=CAGE_peak_3_at_uc003jsd.1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002543!1.98e-07!6;CL:0002139!8.31e-07!24 | |ontology_enrichment_celltype=CL:0002543!1.98e-07!6;CL:0002139!8.31e-07!24 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.00e-16;29 | |ontology_enrichment_development_v019=UBERON:0008947;3.00e-16;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-28!115;UBERON:0001950!4.75e-16!20;UBERON:0002619!7.35e-16!22;UBERON:0000956!2.49e-13!25;UBERON:0000203!2.49e-13!25;UBERON:0002780!3.54e-13!41;UBERON:0001890!3.54e-13!41;UBERON:0006240!3.54e-13!41;UBERON:0001737!5.71e-13!9;UBERON:0003080!1.10e-12!42;UBERON:0000477!1.38e-12!286;UBERON:0001049!3.13e-12!57;UBERON:0005068!3.13e-12!57;UBERON:0006241!3.13e-12!57;UBERON:0007135!3.13e-12!57;UBERON:0001869!5.26e-12!32;UBERON:0001893!5.60e-12!34;UBERON:0002791!4.10e-11!33;UBERON:0002616!1.19e-10!59;UBERON:0003075!2.93e-10!86;UBERON:0007284!2.93e-10!86;UBERON:0000064!5.35e-10!219;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0000955!2.20e-09!69;UBERON:0006238!2.20e-09!69;UBERON:0002346!2.39e-09!90;UBERON:0001017!3.19e-09!82;UBERON:0005743!4.37e-09!86;UBERON:0003056!1.28e-08!61;UBERON:0000062!4.09e-08!511;UBERON:0004111!4.37e-08!241;UBERON:0001871!9.70e-08!7;UBERON:0001872!1.70e-07!5;UBERON:0000025!2.34e-07!194;UBERON:0000073!2.36e-07!94;UBERON:0001016!2.36e-07!94;UBERON:0000481!3.17e-07!347;UBERON:0000059!6.10e-07!11;UBERON:0001557!7.56e-07!19 | |ontology_enrichment_uberon=UBERON:0007023!2.46e-28!115;UBERON:0001950!4.75e-16!20;UBERON:0002619!7.35e-16!22;UBERON:0000956!2.49e-13!25;UBERON:0000203!2.49e-13!25;UBERON:0002780!3.54e-13!41;UBERON:0001890!3.54e-13!41;UBERON:0006240!3.54e-13!41;UBERON:0001737!5.71e-13!9;UBERON:0003080!1.10e-12!42;UBERON:0000477!1.38e-12!286;UBERON:0001049!3.13e-12!57;UBERON:0005068!3.13e-12!57;UBERON:0006241!3.13e-12!57;UBERON:0007135!3.13e-12!57;UBERON:0001869!5.26e-12!32;UBERON:0001893!5.60e-12!34;UBERON:0002791!4.10e-11!33;UBERON:0002616!1.19e-10!59;UBERON:0003075!2.93e-10!86;UBERON:0007284!2.93e-10!86;UBERON:0000064!5.35e-10!219;UBERON:0002020!1.16e-09!34;UBERON:0003528!1.16e-09!34;UBERON:0000955!2.20e-09!69;UBERON:0006238!2.20e-09!69;UBERON:0002346!2.39e-09!90;UBERON:0001017!3.19e-09!82;UBERON:0005743!4.37e-09!86;UBERON:0003056!1.28e-08!61;UBERON:0000062!4.09e-08!511;UBERON:0004111!4.37e-08!241;UBERON:0001871!9.70e-08!7;UBERON:0001872!1.70e-07!5;UBERON:0000025!2.34e-07!194;UBERON:0000073!2.36e-07!94;UBERON:0001016!2.36e-07!94;UBERON:0000481!3.17e-07!347;UBERON:0000059!6.10e-07!11;UBERON:0001557!7.56e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.74e-28;9!UBERON:0001557;1.74e-28;9!UBERON:0001950;7.58e-24;20!UBERON:0002619;1.69e-21;22!UBERON:0000956;1.17e-18;25!UBERON:0000203;1.17e-18;25!UBERON:0001869;3.24e-16;32!UBERON:0001893;5.85e-16;34!UBERON:0002791;8.15e-14;32!UBERON:0000200;1.98e-13;6!UBERON:0003528;2.86e-13;34!UBERON:0002020;2.86e-13;34!UBERON:0001872;4.89e-11;5!UBERON:0000072;6.62e-11;37!UBERON:0000059;9.13e-10;11!UBERON:0002780;4.88e-09;41!UBERON:0001890;4.88e-09;41!UBERON:0000065;1.13e-08;44!UBERON:0001155;1.44e-08;9!UBERON:0002771;2.87e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.74e-28;9!UBERON:0001557;1.74e-28;9!UBERON:0001950;7.58e-24;20!UBERON:0002619;1.69e-21;22!UBERON:0000956;1.17e-18;25!UBERON:0000203;1.17e-18;25!UBERON:0001869;3.24e-16;32!UBERON:0001893;5.85e-16;34!UBERON:0002791;8.15e-14;32!UBERON:0000200;1.98e-13;6!UBERON:0003528;2.86e-13;34!UBERON:0002020;2.86e-13;34!UBERON:0001872;4.89e-11;5!UBERON:0000072;6.62e-11;37!UBERON:0000059;9.13e-10;11!UBERON:0002780;4.88e-09;41!UBERON:0001890;4.88e-09;41!UBERON:0000065;1.13e-08;44!UBERON:0001155;1.44e-08;9!UBERON:0002771;2.87e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.40e-29,9;UBERON:0001950,3.20e-24,20;UBERON:0002619,7.75e-22,22;UBERON:0001869,4.49e-19,32;UBERON:0000956,5.95e-19,25;UBERON:0000203,5.95e-19,25;UBERON:0001893,9.04e-18,34;UBERON:0002791,1.37e-16,32;UBERON:0011216,2.67e-16,223;UBERON:0003528,1.90e-15,34;UBERON:0002020,1.90e-15,34;UBERON:0002780,3.41e-14,41;UBERON:0001890,3.41e-14,41;UBERON:0003080,3.41e-14,41;UBERON:0006240,3.41e-14,41;UBERON:0000200,1.50e-13,6;UBERON:0007023,1.72e-13,114;UBERON:0001557,1.07e-12,19;UBERON:0008947,7.05e-12,38;UBERON:0003258,7.05e-12,38;UBERON:0001872,6.01e-11,5;UBERON:0004921,8.81e-11,118;UBERON:0000073,3.02e-10,53;UBERON:0002616,3.02e-10,53;UBERON:0000059,9.24e-10,11;UBERON:0001049,1.59e-09,56;UBERON:0005068,1.59e-09,56;UBERON:0006241,1.59e-09,56;UBERON:0007135,1.59e-09,56;UBERON:0001007,1.91e-09,145;UBERON:0001555,1.91e-09,145;UBERON:0007026,1.91e-09,145;UBERON:0000072,4.85e-09,47;UBERON:0003056,1.76e-08,61;UBERON:0001155,2.05e-08,9;UBERON:0000955,2.74e-08,68;UBERON:0006238,2.74e-08,68;UBERON:0004119,5.55e-08,160;UBERON:0000925,5.55e-08,160;UBERON:0006595,5.55e-08,160;UBERON:0002771,1.02e-07,2;UBERON:0000065,1.67e-07,54;UBERON:0001017,2.20e-07,81;UBERON:0001041,5.83e-07,87 | |||
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|short_description=p3@uc003jsd.1 | |short_description=p3@uc003jsd.1 | ||
}} | }} |
Latest revision as of 15:31, 30 July 2015
Short description: | p3@uc003jsd.1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003jsd.1_5end |
Coexpression cluster: | C4508_cervical_acute_gastric_medial_gall_bile_large |
Association with transcript: | 215bp_to_uc003jsd.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data