FFCP PHASE1:Hg19::chr12:112123533..112123562,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8315 | |EntrezGene=8315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1099 | |HGNC=1099 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z569 | |UniProt=Q7Z569 | ||
|association_with_transcript=-9bp_to_ENST00000327551,uc009zvv.2_5end | |association_with_transcript=-9bp_to_ENST00000327551,uc009zvv.2_5end | ||
|cluster_id=chr12:112123533..112123562,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_3_at_BRAP_5end | |description=CAGE_peak_3_at_BRAP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.50e-14;1 | |ontology_enrichment_celltype_v019=CL:0000222;1.50e-14;1 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.50e-14;1 | |ontology_enrichment_development_v019=UBERON:0005425;1.50e-14;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.50e-14;1!UBERON:0001785;1.50e-14;1!UBERON:0002464;1.50e-14;1!UBERON:0004904;1.50e-14;1!UBERON:0001021;1.50e-14;1!UBERON:0001954;6.35e-08;2!UBERON:0003714;6.35e-08;2!UBERON:0005162;6.35e-08;2!UBERON:0000122;6.35e-08;2!UBERON:0003022;6.35e-08;2!UBERON:0002421;6.35e-08;2!UBERON:0002600;6.35e-08;2!UBERON:0000473;9.08e-08;8 | |ontology_enrichment_uberon_v019=UBERON:0000941;1.50e-14;1!UBERON:0001785;1.50e-14;1!UBERON:0002464;1.50e-14;1!UBERON:0004904;1.50e-14;1!UBERON:0001021;1.50e-14;1!UBERON:0001954;6.35e-08;2!UBERON:0003714;6.35e-08;2!UBERON:0005162;6.35e-08;2!UBERON:0000122;6.35e-08;2!UBERON:0003022;6.35e-08;2!UBERON:0002421;6.35e-08;2!UBERON:0002600;6.35e-08;2!UBERON:0000473;9.08e-08;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.36e-15,1;UBERON:0001785,9.36e-15,1;UBERON:0002464,9.36e-15,1;UBERON:0004904,9.36e-15,1;UBERON:0001021,9.36e-15,1;UBERON:0003902,9.36e-15,1;UBERON:0005425,9.36e-15,1;UBERON:0001954,4.38e-08,2;UBERON:0003022,4.38e-08,2;UBERON:0002421,4.38e-08,2;UBERON:0002600,4.38e-08,2;UBERON:0003714,5.02e-08,2;UBERON:0005162,5.02e-08,2;UBERON:0000122,5.02e-08,2;UBERON:0000473,9.08e-08,8 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0,0.697801167972428,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.918251677112708,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.0945348171640679,0,0.175669571386252,3.73290365168481,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0,0,0,1.24484414159907,0.269421344139376,0,0,0,0.234321431833797,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0.206651562351531,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0.276149695926898,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0,0.286804595389004,0.243947412259191,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0.721879481669586,0,0,0.241011029883482,0,0,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.329250856225877,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0.492663237895943,0.176096868026452,0.414656231081544,0.576479813667846,0.25248486685276,0,0.381988425558278,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0.904318131178758,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0.431255149719035,0.256686072559497,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0,0.271265023699736,0,0.713715955188647,0.157702415033935,0,0,0,0,1.32845119707087,0,0,0,0,0,0,0.213455115606889,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0,0,0.0821271560138091,0,0.348631135379878,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0,0,0.657779629937804,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0,0.0852266274161009,0,0.330569830721956,0.768760269460425,0.127612712494584,0.30347334256665,0,0,0,0,0.532306030317022,0,0,0.572499546967965,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,1.58625035258854,0,0,0.490080431962063,0,0,0,0.159426272728822,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0.403599414382095,0.425846237690326,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0.197286811273867,0,0,0,0.556608588971108,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.87754158861589,0,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0,0.638002319463839,0,0.533034776018635,0,0.156980256395025,0.332423363800313,0.451191321234361,0,0.167821586975843,0.37950746544837,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0.234264445725339,0.364909578431332,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,1.20258735531594,0,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0.411125773940253,0,0.316553979779393,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0.114536596165916,0,0.432164393964449,0,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0,0,0.199679000498991,0,0.446342914883745,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0,0.160753148465019,0.137539436597234,0.415440338029185,0.449947783103001,0,0.242998226632099,0,0.157611414598396,0.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| ||
|short_description=p3@BRAP | |short_description=p3@BRAP | ||
}} | }} |
Latest revision as of 10:13, 16 September 2015
Short description: | p3@BRAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BRAP_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -9bp_to_ENST00000327551, uc009zvv.2_5end |
EntrezGene: | BRAP |
HGNC: | 1099 |
UniProt: | Q7Z569 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.36e-15 | 1 |
cranial nerve | 9.36e-15 | 1 |
nerve trunk | 9.36e-15 | 1 |
nerve connecting eye with brain | 9.36e-15 | 1 |
nerve | 9.36e-15 | 1 |
retinal neural layer | 9.36e-15 | 1 |
presumptive neural retina | 9.36e-15 | 1 |
Ammon's horn | 4.38e-08 | 2 |
lobe parts of cerebral cortex | 4.38e-08 | 2 |
hippocampal formation | 4.38e-08 | 2 |
limbic lobe | 4.38e-08 | 2 |
neural tissue | 5.02e-08 | 2 |
multi cell component structure | 5.02e-08 | 2 |
neuron projection bundle | 5.02e-08 | 2 |
testis | 9.08e-08 | 8 |