FFCP PHASE1:Hg19::chr10:91043477..91043497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000354541_5end | |association_with_transcript=-24bp_to_ENST00000354541_5end | ||
|cluster_id=chr10:91043477..91043497,+ | |||
|coexpression_cluster_id=C3056 | |coexpression_cluster_id=C3056 | ||
|description=CAGE_peak_1_at_ENST00000354541_5end | |description=CAGE_peak_1_at_ENST00000354541_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1000507;2.18e-16;10!CL:1000494;2.18e-16;10!CL:0000064;1.35e-15;3!CL:0000067;1.35e-15;3!CL:0005012;1.35e-15;3!CL:0002304;1.35e-15;3!CL:1000497;1.37e-12;17!CL:0002518;1.37e-12;17!CL:0000306;2.29e-11;4!CL:0002222;2.29e-11;4!CL:0002224;2.29e-11;4!CL:1000449;9.95e-11;15!CL:0000075;2.93e-10;27!CL:0002681;1.18e-09;12!CL:0002584;1.18e-09;12!CL:0002149;1.01e-07;6!CL:0002255;1.01e-07;6!CL:0000239;2.39e-07;3!CL:1000615;2.39e-07;3!CL:0002306;2.39e-07;3!CL:0002586;2.55e-07;3 | |ontology_enrichment_celltype_v019=CL:1000507;2.18e-16;10!CL:1000494;2.18e-16;10!CL:0000064;1.35e-15;3!CL:0000067;1.35e-15;3!CL:0005012;1.35e-15;3!CL:0002304;1.35e-15;3!CL:1000497;1.37e-12;17!CL:0002518;1.37e-12;17!CL:0000306;2.29e-11;4!CL:0002222;2.29e-11;4!CL:0002224;2.29e-11;4!CL:1000449;9.95e-11;15!CL:0000075;2.93e-10;27!CL:0002681;1.18e-09;12!CL:0002584;1.18e-09;12!CL:0002149;1.01e-07;6!CL:0002255;1.01e-07;6!CL:0000239;2.39e-07;3!CL:1000615;2.39e-07;3!CL:0002306;2.39e-07;3!CL:0002586;2.55e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,3.31e-16,10;CL:1000494,3.31e-16,10;CL:0000064,1.29e-15,3;CL:0000067,1.29e-15,3;CL:0005012,1.29e-15,3;CL:0002304,1.29e-15,3;CL:0000066,2.03e-13,253;CL:1000497,1.48e-12,17;CL:0002518,1.48e-12,17;CL:0000306,2.95e-11,4;CL:0002222,2.95e-11,4;CL:0002224,2.95e-11,4;CL:1000449,1.30e-10,15;CL:0000075,3.31e-10,27;CL:0002681,1.62e-09,12;CL:0002584,1.62e-09,12;CL:0002149,8.83e-08,6;CL:0002255,8.83e-08,6;CL:0002586,2.25e-07,3;CL:0000239,2.63e-07,3;CL:1000615,2.63e-07,3;CL:0002306,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.21e-07;3 | |ontology_enrichment_development_v019=UBERON:0006215;5.21e-07;3 | ||
|ontology_enrichment_disease=DOID:305!5.19e-07!106 | |ontology_enrichment_disease=DOID:305!5.19e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.89e-10;2!DOID:3001;1.01e-07;6 | |ontology_enrichment_disease_v019=DOID:4468;1.89e-10;2!DOID:3001;1.01e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,1.06e-10,2;DOID:3001,8.83e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.21e-12!11;UBERON:0002113!1.31e-09!27;UBERON:0003918!1.31e-09!27;UBERON:0005095!1.31e-09!27;UBERON:0007687!1.31e-09!27;UBERON:0000489!9.86e-09!32;UBERON:0000970!2.72e-08!20;UBERON:0006554!3.28e-08!44;UBERON:0001008!7.53e-08!45;UBERON:0000475!8.26e-08!365;UBERON:0000020!8.45e-08!23;UBERON:0002104!1.15e-07!21;UBERON:0000019!1.38e-07!19;UBERON:0000047!1.38e-07!19;UBERON:0004088!1.38e-07!19;UBERON:0003072!1.38e-07!19;UBERON:0003071!1.38e-07!19;UBERON:0004128!1.38e-07!19;UBERON:0000062!1.38e-07!511;UBERON:0003075!1.85e-07!86;UBERON:0007284!1.85e-07!86;UBERON:0004175!2.51e-07!25;UBERON:0000058!2.82e-07!26;UBERON:0001032!2.92e-07!24;UBERON:0004456!2.92e-07!24;UBERON:0002346!3.50e-07!90;UBERON:0000064!4.42e-07!219;UBERON:0000119!8.50e-07!312 | |ontology_enrichment_uberon=UBERON:0007625!6.21e-12!11;UBERON:0002113!1.31e-09!27;UBERON:0003918!1.31e-09!27;UBERON:0005095!1.31e-09!27;UBERON:0007687!1.31e-09!27;UBERON:0000489!9.86e-09!32;UBERON:0000970!2.72e-08!20;UBERON:0006554!3.28e-08!44;UBERON:0001008!7.53e-08!45;UBERON:0000475!8.26e-08!365;UBERON:0000020!8.45e-08!23;UBERON:0002104!1.15e-07!21;UBERON:0000019!1.38e-07!19;UBERON:0000047!1.38e-07!19;UBERON:0004088!1.38e-07!19;UBERON:0003072!1.38e-07!19;UBERON:0003071!1.38e-07!19;UBERON:0004128!1.38e-07!19;UBERON:0000062!1.38e-07!511;UBERON:0003075!1.85e-07!86;UBERON:0007284!1.85e-07!86;UBERON:0004175!2.51e-07!25;UBERON:0000058!2.82e-07!26;UBERON:0001032!2.92e-07!24;UBERON:0004456!2.92e-07!24;UBERON:0002346!3.50e-07!90;UBERON:0000064!4.42e-07!219;UBERON:0000119!8.50e-07!312 | ||
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| ||
|short_description=p1@ENST00000354541 | |short_description=p1@ENST00000354541 | ||
}} | }} |
Latest revision as of 16:35, 23 July 2015
Short description: | p1@ENST00000354541 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000354541_5end |
Coexpression cluster: | C3056_epidermoid_Renal_anaplastic_clear_Iris_ductal_Retinal |
Association with transcript: | -24bp_to_ENST00000354541_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.31e-16 | 10 |
nephron tubule epithelial cell | 3.31e-16 | 10 |
ciliated cell | 1.29e-15 | 3 |
ciliated epithelial cell | 1.29e-15 | 3 |
multi-ciliated epithelial cell | 1.29e-15 | 3 |
non-pigmented ciliary epithelial cell | 1.29e-15 | 3 |
epithelial cell | 2.03e-13 | 253 |
kidney cell | 1.48e-12 | 17 |
kidney epithelial cell | 1.48e-12 | 17 |
crystallin accumulating cell | 2.95e-11 | 4 |
vertebrate lens cell | 2.95e-11 | 4 |
lens epithelial cell | 2.95e-11 | 4 |
epithelial cell of nephron | 1.30e-10 | 15 |
columnar/cuboidal epithelial cell | 3.31e-10 | 27 |
kidney cortical cell | 1.62e-09 | 12 |
renal cortical epithelial cell | 1.62e-09 | 12 |
epithelial cell of uterus | 8.83e-08 | 6 |
stromal cell of endometrium | 8.83e-08 | 6 |
retinal pigment epithelial cell | 2.25e-07 | 3 |
brush border epithelial cell | 2.63e-07 | 3 |
kidney cortex tubule cell | 2.63e-07 | 3 |
epithelial cell of proximal tubule | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.06e-10 | 2 |
female reproductive endometrioid cancer | 8.83e-08 | 6 |