FFCP PHASE1:Hg19::chr20:36760816..36760830,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:36760816..36760830,-
|short_description=p@chr20:36760816..36760830,-
|description=CAGE_peak_at_chr20:36760816..36760830,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:36760816..36760830,- | |||
|description=CAGE_peak_at_chr20:36760816..36760830,- | |||
|id=chr20:36760816..36760830,- | |||
|ontology_enrichment_celltype=CL:0000192!2.00e-10!42;CL:0000514!2.00e-10!42;CL:0000222!1.24e-09!119;CL:0000680!1.64e-07!57;CL:0000056!1.64e-07!57;CL:0000355!1.64e-07!57;CL:0000187!1.73e-07!54;CL:0000359!2.21e-07!32;CL:0000183!4.96e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.74e-32;19!CL:0002541;7.87e-24;3!CL:0002536;1.60e-16;2!CL:0002262;3.48e-16;2!CL:1000398;3.48e-16;2!CL:0002595;2.83e-14;5!CL:0002577;1.79e-11;3!CL:0002537;2.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.79e-32,19;CL:0002541,6.77e-24,3;CL:0002536,9.26e-17,2;CL:0002262,3.77e-16,2;CL:1000398,3.77e-16,2;CL:0002595,2.20e-14,5;CL:0002577,1.57e-11,3;CL:0002537,2.31e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;1.66e-37;10!UBERON:0000158;1.66e-37;10!UBERON:0003513;5.78e-27;7!UBERON:0000478;4.88e-25;24!UBERON:0003124;7.87e-24;3!UBERON:0000920;7.87e-24;3!UBERON:0000305;2.68e-18;7!UBERON:0001281;3.48e-16;2!UBERON:0003497;3.48e-16;2!UBERON:0003909;3.48e-16;2!UBERON:0003835;3.48e-16;2!UBERON:0003834;2.83e-14;5!UBERON:0001533;2.83e-14;5!UBERON:0000077;3.82e-13;27!UBERON:0001280;4.19e-11;3!UBERON:0004647;4.19e-11;3!UBERON:0001987;8.02e-09;4!UBERON:0002367;9.27e-07;11!UBERON:0010147;9.27e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.44e-44,14;UBERON:0000158,4.44e-44,14;UBERON:0003124,8.71e-28,7;UBERON:0003513,4.54e-27,7;UBERON:0000478,3.53e-25,24;UBERON:0000920,6.77e-24,3;UBERON:0000305,1.97e-18,7;UBERON:0004871,3.73e-16,8;UBERON:0001281,3.77e-16,2;UBERON:0003497,3.77e-16,2;UBERON:0003909,3.77e-16,2;UBERON:0003835,3.77e-16,2;UBERON:0003834,2.20e-14,5;UBERON:0001533,2.20e-14,5;UBERON:0000077,4.62e-12,29;UBERON:0001280,4.42e-11,3;UBERON:0004647,4.42e-11,3;UBERON:0005171,4.42e-11,3;UBERON:0004923,2.94e-10,66;UBERON:0001987,7.29e-09,4;UBERON:0004340,7.29e-09,4 | |||
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| ||
|short_description=p@chr20:36760816..36760830,- | |||
}} | }} |
Latest revision as of 13:50, 28 July 2015
Short description: | p@chr20:36760816..36760830, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36760816..36760830, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.79e-32 | 19 |
chorionic membrane mesenchymal stem cell | 6.77e-24 | 3 |
amniotic epithelial cell | 9.26e-17 | 2 |
endothelial cell of sinusoid | 3.77e-16 | 2 |
endothelial cell of hepatic sinusoid | 3.77e-16 | 2 |
smooth muscle cell of the subclavian artery | 2.20e-14 | 5 |
placental epithelial cell | 1.57e-11 | 3 |
amnion mesenchymal stem cell | 2.31e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.44e-44 | 14 |
membranous layer | 4.44e-44 | 14 |
chorion | 8.71e-28 | 7 |
trunk blood vessel | 4.54e-27 | 7 |
extraembryonic structure | 3.53e-25 | 24 |
egg chorion | 6.77e-24 | 3 |
amnion | 1.97e-18 | 7 |
somatic layer of lateral plate mesoderm | 3.73e-16 | 8 |
hepatic sinusoid | 3.77e-16 | 2 |
abdomen blood vessel | 3.77e-16 | 2 |
sinusoid | 3.77e-16 | 2 |
abdominal segment blood vessel | 3.77e-16 | 2 |
thoracic segment blood vessel | 2.20e-14 | 5 |
subclavian artery | 2.20e-14 | 5 |
mixed endoderm/mesoderm-derived structure | 4.62e-12 | 29 |
liver parenchyma | 4.42e-11 | 3 |
liver lobule | 4.42e-11 | 3 |
hepatic duct | 4.42e-11 | 3 |
organ component layer | 2.94e-10 | 66 |
placenta | 7.29e-09 | 4 |
allantois | 7.29e-09 | 4 |