FFCP PHASE1:Hg19::chr17:73753308..73753323,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73753308..73753323,+ | |||
|description=CAGE_peak_at_chr17:73753308..73753323,+ | |description=CAGE_peak_at_chr17:73753308..73753323,+ | ||
|id=chr17:73753308..73753323,+ | |id=chr17:73753308..73753323,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.73e-29!43;CL:0000223!4.71e-25!59;CL:0000066!4.26e-23!254;CL:0002368!1.66e-15!13;CL:0002251!3.70e-15!21;CL:0000622!3.61e-10!5;CL:0002202!3.13e-09!9;CL:0002632!3.13e-09!9;CL:0000244!1.14e-08!4;CL:0000731!1.14e-08!4;CL:0000154!2.37e-08!6;CL:0002159!8.70e-08!13;CL:0002623!7.83e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.73e-29!43;CL:0000223!4.71e-25!59;CL:0000066!4.26e-23!254;CL:0002368!1.66e-15!13;CL:0002251!3.70e-15!21;CL:0000622!3.61e-10!5;CL:0002202!3.13e-09!9;CL:0002632!3.13e-09!9;CL:0000244!1.14e-08!4;CL:0000731!1.14e-08!4;CL:0000154!2.37e-08!6;CL:0002159!8.70e-08!13;CL:0002623!7.83e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.94e-37;5!CL:0002623;2.67e-35;3!CL:0000154;4.00e-31;6!CL:0000244;2.31e-27;4!CL:0000731;2.31e-27;4!CL:0000150;6.97e-21;9!CL:0002252;5.70e-13;1!CL:0000362;2.45e-12;9!CL:0000312;2.14e-10;5!CL:0002076;2.78e-10;42!CL:0002251;1.50e-09;20!CL:0000240;8.24e-09;6!CL:0000311;8.24e-09;6!CL:0000079;8.24e-09;6!CL:0000237;8.24e-09;6!CL:0002159;4.01e-08;14!CL:0000317;4.04e-07;2!CL:1000448;4.04e-07;2!CL:0002308;4.04e-07;2!CL:0002140;4.04e-07;2 | |ontology_enrichment_celltype_v019=CL:0000622;2.94e-37;5!CL:0002623;2.67e-35;3!CL:0000154;4.00e-31;6!CL:0000244;2.31e-27;4!CL:0000731;2.31e-27;4!CL:0000150;6.97e-21;9!CL:0002252;5.70e-13;1!CL:0000362;2.45e-12;9!CL:0000312;2.14e-10;5!CL:0002076;2.78e-10;42!CL:0002251;1.50e-09;20!CL:0000240;8.24e-09;6!CL:0000311;8.24e-09;6!CL:0000079;8.24e-09;6!CL:0000237;8.24e-09;6!CL:0002159;4.01e-08;14!CL:0000317;4.04e-07;2!CL:1000448;4.04e-07;2!CL:0002308;4.04e-07;2!CL:0002140;4.04e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.23e-37,5;CL:0002623,3.60e-35,3;CL:0000154,3.17e-31,6;CL:0000244,2.64e-27,4;CL:0000731,2.64e-27,4;CL:0000150,5.98e-21,9;CL:0002252,3.33e-13,1;CL:0002076,5.26e-13,42;CL:0000362,2.32e-12,9;CL:0000312,2.59e-10,5;CL:0002251,1.44e-09,20;CL:0000223,3.00e-09,58;CL:0000240,9.63e-09,6;CL:0000311,9.63e-09,6;CL:0000079,9.63e-09,6;CL:0000237,9.63e-09,6;CL:0000036,9.63e-09,6;CL:0000357,9.63e-09,6;CL:0000114,9.63e-09,6;CL:0000066,1.77e-08,253;CL:0002159,3.87e-08,14;CL:0000317,2.91e-07,2;CL:1000448,2.91e-07,2;CL:0002308,2.91e-07,2;CL:0002140,2.91e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.70e-13;1!UBERON:0004874;5.70e-13;1!CL:0000357;8.24e-09;6!CL:0000114;8.24e-09;6 | |ontology_enrichment_development_v019=UBERON:0005425;5.70e-13;1!UBERON:0004874;5.70e-13;1!CL:0000357;8.24e-09;6!CL:0000114;8.24e-09;6 | ||
|ontology_enrichment_disease=DOID:299!1.08e-09!25;DOID:305!1.73e-08!106 | |ontology_enrichment_disease=DOID:299!1.08e-09!25;DOID:305!1.73e-08!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.84e-15!169;UBERON:0000925!5.84e-15!169;UBERON:0006595!5.84e-15!169;UBERON:0005910!2.87e-11!6;UBERON:0004121!9.27e-11!169;UBERON:0000924!3.19e-10!173;UBERON:0006601!3.19e-10!173;UBERON:0000365!7.02e-10!5;UBERON:0001007!1.96e-08!155;UBERON:0001555!1.96e-08!155;UBERON:0007026!1.96e-08!155;UBERON:0001004!2.48e-08!72;UBERON:0000064!9.38e-08!219;UBERON:0000062!1.34e-07!511;UBERON:0005911!6.14e-07!82;UBERON:0007196!6.15e-07!14;UBERON:0001558!6.15e-07!14;UBERON:0000923!9.69e-07!604;UBERON:0005291!9.69e-07!604;UBERON:0006598!9.69e-07!604;UBERON:0002532!9.69e-07!604 | |ontology_enrichment_uberon=UBERON:0004119!5.84e-15!169;UBERON:0000925!5.84e-15!169;UBERON:0006595!5.84e-15!169;UBERON:0005910!2.87e-11!6;UBERON:0004121!9.27e-11!169;UBERON:0000924!3.19e-10!173;UBERON:0006601!3.19e-10!173;UBERON:0000365!7.02e-10!5;UBERON:0001007!1.96e-08!155;UBERON:0001555!1.96e-08!155;UBERON:0007026!1.96e-08!155;UBERON:0001004!2.48e-08!72;UBERON:0000064!9.38e-08!219;UBERON:0000062!1.34e-07!511;UBERON:0005911!6.14e-07!82;UBERON:0007196!6.15e-07!14;UBERON:0001558!6.15e-07!14;UBERON:0000923!9.69e-07!604;UBERON:0005291!9.69e-07!604;UBERON:0006598!9.69e-07!604;UBERON:0002532!9.69e-07!604 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.92e-22;5!UBERON:0005910;1.78e-18;6!UBERON:0001044;5.14e-18;6!UBERON:0003293;5.14e-18;6!UBERON:0003294;5.14e-18;6!UBERON:0010047;5.14e-18;6!UBERON:0003408;5.14e-18;6!UBERON:0000167;5.14e-18;6!UBERON:0001041;1.54e-13;14!UBERON:0000989;5.70e-13;1!UBERON:0000941;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0008811;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0000486;1.57e-09;12!UBERON:0001003;1.29e-07;15!UBERON:0007376;1.29e-07;15!UBERON:0002419;4.04e-07;2!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2!UBERON:0007771;4.04e-07;2!UBERON:0003297;4.04e-07;2!UBERON:0001821;4.04e-07;2!UBERON:0003487;4.04e-07;2!UBERON:0001820;4.04e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000365;4.92e-22;5!UBERON:0005910;1.78e-18;6!UBERON:0001044;5.14e-18;6!UBERON:0003293;5.14e-18;6!UBERON:0003294;5.14e-18;6!UBERON:0010047;5.14e-18;6!UBERON:0003408;5.14e-18;6!UBERON:0000167;5.14e-18;6!UBERON:0001041;1.54e-13;14!UBERON:0000989;5.70e-13;1!UBERON:0000941;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0008811;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0000486;1.57e-09;12!UBERON:0001003;1.29e-07;15!UBERON:0007376;1.29e-07;15!UBERON:0002419;4.04e-07;2!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2!UBERON:0007771;4.04e-07;2!UBERON:0003297;4.04e-07;2!UBERON:0001821;4.04e-07;2!UBERON:0003487;4.04e-07;2!UBERON:0001820;4.04e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,5.48e-22,5;UBERON:0005910,1.95e-18,6;UBERON:0001044,5.96e-18,6;UBERON:0003293,5.96e-18,6;UBERON:0003294,5.96e-18,6;UBERON:0010047,5.96e-18,6;UBERON:0000167,5.96e-18,6;UBERON:0000989,4.23e-13,1;UBERON:0008811,4.23e-13,1;UBERON:0006258,4.23e-13,1;UBERON:0005876,4.23e-13,1;UBERON:0004874,4.23e-13,1;UBERON:0000941,4.77e-13,1;UBERON:0001785,4.77e-13,1;UBERON:0002464,4.77e-13,1;UBERON:0004904,4.77e-13,1;UBERON:0001021,4.77e-13,1;UBERON:0003902,4.77e-13,1;UBERON:0005425,4.77e-13,1;UBERON:0003408,5.12e-11,10;UBERON:0001003,1.25e-07,15;UBERON:0007376,1.25e-07,15;UBERON:0007383,1.25e-07,15;UBERON:0004119,2.27e-07,160;UBERON:0000925,2.27e-07,160;UBERON:0006595,2.27e-07,160;UBERON:0002419,2.91e-07,2;UBERON:0007771,2.91e-07,2;UBERON:0003297,2.91e-07,2;UBERON:0001821,2.91e-07,2;UBERON:0003487,2.91e-07,2;UBERON:0001820,2.91e-07,2;UBERON:0005089,2.91e-07,2;UBERON:0005088,2.91e-07,2;UBERON:0003714,3.70e-07,2;UBERON:0005162,3.70e-07,2;UBERON:0000122,3.70e-07,2 | |||
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| ||
|short_description=p@chr17:73753308..73753323,+ | |short_description=p@chr17:73753308..73753323,+ | ||
}} | }} |
Latest revision as of 21:12, 25 July 2015
Short description: | p@chr17:73753308..73753323, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73753308..73753323, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.23e-37 | 5 |
acinar cell of salivary gland | 3.60e-35 | 3 |
protein secreting cell | 3.17e-31 | 6 |
transitional epithelial cell | 2.64e-27 | 4 |
urothelial cell | 2.64e-27 | 4 |
glandular epithelial cell | 5.98e-21 | 9 |
epithelial cell of esophagus | 3.33e-13 | 1 |
endo-epithelial cell | 5.26e-13 | 42 |
epidermal cell | 2.32e-12 | 9 |
keratinocyte | 2.59e-10 | 5 |
epithelial cell of alimentary canal | 1.44e-09 | 20 |
endodermal cell | 3.00e-09 | 58 |
stratified squamous epithelial cell | 9.63e-09 | 6 |
keratin accumulating cell | 9.63e-09 | 6 |
stratified epithelial cell | 9.63e-09 | 6 |
keratinizing barrier epithelial cell | 9.63e-09 | 6 |
epithelial fate stem cell | 9.63e-09 | 6 |
stratified epithelial stem cell | 9.63e-09 | 6 |
surface ectodermal cell | 9.63e-09 | 6 |
epithelial cell | 1.77e-08 | 253 |
general ecto-epithelial cell | 3.87e-08 | 14 |
sebum secreting cell | 2.91e-07 | 2 |
epithelial cell of sweat gland | 2.91e-07 | 2 |
epithelial cell of skin gland | 2.91e-07 | 2 |
acinar cell of sebaceous gland | 2.91e-07 | 2 |