FFCP PHASE1:Mm9::chr2:129418406..129418417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19261 | |EntrezGene=19261 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-153bp_to_ENSMUST00000127751_5end | |association_with_transcript=-153bp_to_ENSMUST00000127751_5end | ||
|cluster_id=chr2:129418406..129418417,+ | |||
|description=CAGE_peak_14_at_Sirpa_5end | |description=CAGE_peak_14_at_Sirpa_5end | ||
|id=chr2:129418406..129418417,+ | |id=chr2:129418406..129418417,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,1.33e-08,3;CL:0002540,1.33e-08,3;CL:0002610,2.43e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!7.28e-11!50;UBERON:0006238!7.28e-11!50;UBERON:0002616!2.88e-10!49;UBERON:0002791!1.81e-09!29;UBERON:0003528!1.81e-09!29;UBERON:0001893!1.81e-09!29;UBERON:0002021!1.86e-09!10;UBERON:0000411!1.86e-09!10;UBERON:0001950!1.86e-09!10;UBERON:0003080!4.92e-09!40;UBERON:0000033!6.25e-09!63;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0002020!3.94e-08!34;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0001049!1.93e-07!52;UBERON:0005068!1.93e-07!52;UBERON:0006241!1.93e-07!52;UBERON:0007135!1.93e-07!52;UBERON:0003056!2.64e-07!49;UBERON:0001017!3.63e-07!73;UBERON:0005743!3.63e-07!73;UBERON:0002619!7.40e-07!17 | |ontology_enrichment_uberon=UBERON:0000955!7.28e-11!50;UBERON:0006238!7.28e-11!50;UBERON:0002616!2.88e-10!49;UBERON:0002791!1.81e-09!29;UBERON:0003528!1.81e-09!29;UBERON:0001893!1.81e-09!29;UBERON:0002021!1.86e-09!10;UBERON:0000411!1.86e-09!10;UBERON:0001950!1.86e-09!10;UBERON:0003080!4.92e-09!40;UBERON:0000033!6.25e-09!63;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0002020!3.94e-08!34;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0001049!1.93e-07!52;UBERON:0005068!1.93e-07!52;UBERON:0006241!1.93e-07!52;UBERON:0007135!1.93e-07!52;UBERON:0003056!2.64e-07!49;UBERON:0001017!3.63e-07!73;UBERON:0005743!3.63e-07!73;UBERON:0002619!7.40e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.84e-29,10;UBERON:0000411,2.84e-29,10;UBERON:0001950,2.84e-29,10;UBERON:0002619,1.05e-19,17;UBERON:0000956,1.66e-18,21;UBERON:0001869,1.66e-18,21;UBERON:0000203,1.66e-18,21;UBERON:0003080,2.22e-15,40;UBERON:0000073,3.60e-15,54;UBERON:0003528,5.43e-15,29;UBERON:0002791,5.43e-15,29;UBERON:0001893,5.43e-15,29;UBERON:0000955,2.30e-14,47;UBERON:0006238,2.30e-14,47;UBERON:0002780,5.82e-14,39;UBERON:0001890,5.82e-14,39;UBERON:0006240,5.82e-14,39;UBERON:0002616,6.70e-13,46;UBERON:0001017,9.15e-13,73;UBERON:0002020,2.33e-12,34;UBERON:0001016,2.67e-12,75;UBERON:0003056,6.87e-12,49;UBERON:0001049,5.37e-11,52;UBERON:0005068,5.37e-11,52;UBERON:0006241,5.37e-11,52;UBERON:0007135,5.37e-11,52;UBERON:0004121,9.79e-09,95;UBERON:0000924,9.79e-09,95;UBERON:0006601,9.79e-09,95;UBERON:0004684,2.43e-08,3;UBERON:0002275,2.43e-08,3;UBERON:0002346,2.85e-08,64;UBERON:0003075,2.85e-08,64;UBERON:0007284,2.85e-08,64;UBERON:0010371,7.97e-07,73 | |||
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| ||
|short_description=p14@Sirpa | |short_description=p14@Sirpa | ||
}} | }} |
Latest revision as of 17:22, 25 September 2015
Short description: | p14@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -153bp_to_ENSMUST00000127751_5end |
EntrezGene: | Sirpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 1.33e-08 | 3 |
mesenchymal stem cell of the bone marrow | 1.33e-08 | 3 |
raphe nuclei neuron | 2.43e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.84e-29 | 10 |
visual cortex | 2.84e-29 | 10 |
neocortex | 2.84e-29 | 10 |
regional part of cerebral cortex | 1.05e-19 | 17 |
cerebral cortex | 1.66e-18 | 21 |
cerebral hemisphere | 1.66e-18 | 21 |
pallium | 1.66e-18 | 21 |
anterior neural tube | 2.22e-15 | 40 |
regional part of nervous system | 3.60e-15 | 54 |
brain grey matter | 5.43e-15 | 29 |
regional part of telencephalon | 5.43e-15 | 29 |
telencephalon | 5.43e-15 | 29 |
brain | 2.30e-14 | 47 |
future brain | 2.30e-14 | 47 |
regional part of forebrain | 5.82e-14 | 39 |
forebrain | 5.82e-14 | 39 |
future forebrain | 5.82e-14 | 39 |
regional part of brain | 6.70e-13 | 46 |
central nervous system | 9.15e-13 | 73 |
gray matter | 2.33e-12 | 34 |
nervous system | 2.67e-12 | 75 |
pre-chordal neural plate | 6.87e-12 | 49 |
neural tube | 5.37e-11 | 52 |
neural rod | 5.37e-11 | 52 |
future spinal cord | 5.37e-11 | 52 |
neural keel | 5.37e-11 | 52 |
ectoderm-derived structure | 9.79e-09 | 95 |
ectoderm | 9.79e-09 | 95 |
presumptive ectoderm | 9.79e-09 | 95 |
raphe nuclei | 2.43e-08 | 3 |
reticular formation | 2.43e-08 | 3 |
neurectoderm | 2.85e-08 | 64 |
neural plate | 2.85e-08 | 64 |
presumptive neural plate | 2.85e-08 | 64 |
ecto-epithelium | 7.97e-07 | 73 |