FFCP PHASE1:Mm9::chr3:133902218..133902243,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1454 | |MCL_coexpression_id=1454 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:133902218..133902243,+ | |||
|description=CAGE_peak_at_chr3:133902218..133902243,+ | |description=CAGE_peak_at_chr3:133902218..133902243,+ | ||
|id=chr3:133902218..133902243,+ | |id=chr3:133902218..133902243,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.25e-08!23;CL:0000337!1.25e-08!23;CL:0000540!9.12e-07!33;CL:0000047!9.12e-07!33;CL:0000031!9.12e-07!33;CL:0000404!9.12e-07!33 | |ontology_enrichment_celltype=CL:0000117!1.25e-08!23;CL:0000337!1.25e-08!23;CL:0000540!9.12e-07!33;CL:0000047!9.12e-07!33;CL:0000031!9.12e-07!33;CL:0000404!9.12e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.82e-10,23;CL:0000337,9.82e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.44e-19!71;UBERON:0003075!2.44e-19!71;UBERON:0007284!2.44e-19!71;UBERON:0000033!1.11e-18!63;UBERON:0004121!4.90e-17!102;UBERON:0000924!4.90e-17!102;UBERON:0006601!4.90e-17!102;UBERON:0003056!1.64e-16!49;UBERON:0001049!3.24e-16!52;UBERON:0005068!3.24e-16!52;UBERON:0006241!3.24e-16!52;UBERON:0007135!3.24e-16!52;UBERON:0001017!6.41e-16!73;UBERON:0005743!6.41e-16!73;UBERON:0000955!6.96e-16!50;UBERON:0006238!6.96e-16!50;UBERON:0002616!3.30e-15!49;UBERON:0000073!3.91e-15!75;UBERON:0001016!3.91e-15!75;UBERON:0003080!3.77e-12!40;UBERON:0002780!1.66e-11!39;UBERON:0001890!1.66e-11!39;UBERON:0006240!1.66e-11!39;UBERON:0000153!4.02e-09!94;UBERON:0002020!4.61e-09!34;UBERON:0000468!1.52e-08!333;UBERON:0007811!2.62e-08!86;UBERON:0002791!2.62e-07!29;UBERON:0003528!2.62e-07!29;UBERON:0001893!2.62e-07!29;UBERON:0000922!6.01e-07!328 | |ontology_enrichment_uberon=UBERON:0002346!2.44e-19!71;UBERON:0003075!2.44e-19!71;UBERON:0007284!2.44e-19!71;UBERON:0000033!1.11e-18!63;UBERON:0004121!4.90e-17!102;UBERON:0000924!4.90e-17!102;UBERON:0006601!4.90e-17!102;UBERON:0003056!1.64e-16!49;UBERON:0001049!3.24e-16!52;UBERON:0005068!3.24e-16!52;UBERON:0006241!3.24e-16!52;UBERON:0007135!3.24e-16!52;UBERON:0001017!6.41e-16!73;UBERON:0005743!6.41e-16!73;UBERON:0000955!6.96e-16!50;UBERON:0006238!6.96e-16!50;UBERON:0002616!3.30e-15!49;UBERON:0000073!3.91e-15!75;UBERON:0001016!3.91e-15!75;UBERON:0003080!3.77e-12!40;UBERON:0002780!1.66e-11!39;UBERON:0001890!1.66e-11!39;UBERON:0006240!1.66e-11!39;UBERON:0000153!4.02e-09!94;UBERON:0002020!4.61e-09!34;UBERON:0000468!1.52e-08!333;UBERON:0007811!2.62e-08!86;UBERON:0002791!2.62e-07!29;UBERON:0003528!2.62e-07!29;UBERON:0001893!2.62e-07!29;UBERON:0000922!6.01e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.59e-22,64;UBERON:0003075,5.59e-22,64;UBERON:0007284,5.59e-22,64;UBERON:0010314,5.25e-20,92;UBERON:0000073,2.20e-19,54;UBERON:0010371,1.92e-18,73;UBERON:0003056,2.19e-18,49;UBERON:0001049,4.29e-18,52;UBERON:0005068,4.29e-18,52;UBERON:0006241,4.29e-18,52;UBERON:0007135,4.29e-18,52;UBERON:0004121,6.35e-18,95;UBERON:0000924,6.35e-18,95;UBERON:0006601,6.35e-18,95;UBERON:0001017,1.02e-17,73;UBERON:0001016,9.81e-17,75;UBERON:0000955,1.41e-15,47;UBERON:0006238,1.41e-15,47;UBERON:0002616,9.37e-15,46;UBERON:0003080,7.77e-13,40;UBERON:0002780,4.87e-12,39;UBERON:0001890,4.87e-12,39;UBERON:0006240,4.87e-12,39;UBERON:0002020,5.14e-09,34;UBERON:0001894,4.01e-07,10;UBERON:0006222,4.01e-07,10;UBERON:0000970,6.26e-07,9;UBERON:0000019,6.26e-07,9;UBERON:0000047,6.26e-07,9;UBERON:0010312,6.26e-07,9;UBERON:0004088,6.26e-07,9;UBERON:0002104,6.26e-07,9;UBERON:0001456,6.26e-07,9;UBERON:0003072,6.26e-07,9;UBERON:0004128,6.26e-07,9;UBERON:0003071,6.26e-07,9;UBERON:0003528,7.44e-07,29;UBERON:0002791,7.44e-07,29;UBERON:0001893,7.44e-07,29 | |||
|phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0.777719596297134,0,0,0,0,0,0,0,0,4.65327859977075,2.11596391708813,3.1691570175309,1.0165335962074,0,0,0,0,0,0.384218305321555,1.03689612308478,0.405017814995072,0.210324961351382,1.71390590642282,1.10434270475807,1.10241719293459,2.58782771749238,0.919218786610021,3.30347642998166,2.42605942361857,2.91852413186863,3.56092976871523,3.47653045689157,7.29278718779464,1.11673199600552,2.8138130501584,1.98637722109853,2.06240009831567,3.27454865837937,2.79599168737951,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,1.21439728736295,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,0.502666365318702,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,13.7606974595427,9.63454851341893,0,0,0,0,7.04016005202667,2.74500361691176,6.03140890141749,2.9550134432687,2.04572365864264,3.32460871295296,4.05603157669394,2.54598409625791,0.248813941220186,0,2.10441855886474,1.69156575851515,1.37941262660084,1.98068342785884,2.56198190320716,5.44291993210623,5.12454881139399,3.18585863503078,3.88055056108524,2.58681591519411,0.756424320671277,2.46331573829528,1.09597866213787,1.66828349535359,1.39300866608867,0.205782136407943,0.796137067273973,0,0,0,1.86413195281952,2.81431271977315,1.62055855314913,2.3674473558521,1.57411385397923,1.85120535464854,1.39520366850245,0,1.5179494507732,1.15191894939436,1.14917224855367,0.810688095458557,0.584799949701329,0.658650345873152,0.805238512562231,1.05144974282064,1.64647379806855,0,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,1.61346819698674,0.667134131534611,0.951128130562796,0,0.164698954724011,0.251335208800269,0.795825888164603,0.779856348476481,0,0.216138049874694,0,0.758671603812327,1.25673363870702,2.25415471346161,0.407302655690628,0.969762435838129,0.771494018793504,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0.757965647081939,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.327726629431476,0.345369963731791,0,0,0,0.491764273019036,1.37968373152366,3.21101179975584,4.10240903072711,0,0,0,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,2.04579100537918,1.18586333383957,6.74774764485795,2.98074178937364,1.42452482933804,0.651547837414304,0.659880491890142,0,2.6705869977048,1.81394134178851,3.01768127609437,1.18120757152309,2.15204603560749,1.29214146584111,0.727067458955011,1.06949213515416,0.948110273807448,0,0,2.38307724027652,2.52085531643834,1.81102157295856,2.14337035031592,3.19212420556092,2.31879462882692,1.15184314421485,2.13125464380219,0,0,0.882113592219848,0.8244312647074,0.645857706783622,0.603129249281559,0.238744688006273,0,1.1659233465194,4.07935664423121,0,1.857481811669,0.555583582109135,0,0.136694227721025,0,0,0,0,1.90934123603023,3.32152793260192,2.64315307264903,1.29606408986162,1.04544148007234,0.436725127492355,1.21377911746339,1.23980183588004,0,0.129614973291793,0,0,0.747582730219894,1.82004339502807,1.55560950675238,0.774958940866387,2.02747350588934,3.0512882047896,1.17183946359555,0.629156066554265,0,0,0,0.405450430580328,0.718976700153791,0.77952493786677,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,1.50471631210609,4.51801474093653,1.38097570952153,0.572895513439397,1.03111909406213,2.05524755931193,3.0215755895588,0.675022500231806,3.15224842256954,3.62513927187364,0.51776031175182,2.07574695168353,1.59609949360412,1.36586884603307,1.21553358534147,0.419226325255965,1.2869045591501,1.33348036680969,2.06035057238894,0.320919209591815,0.252697211763798,1.77435509923168,0.754505365544305,0.842773567228942,1.02440243847791,0.689225627467359,0.952587382566147,1.0429589335037,0.38581844092741,0.412085900803307,1.47198920134397,1.71434626192708,2.12970967391205,0.715308569841963,1.45346416632329,1.2234219453993,1.77690676572521,0.365855945745545,1.31534855718921,1.35804113845862,1.12228454331548,0.474540072496697,1.37906275325789,1.63692417267876,0.619747364743864,1.92906610981141,0.499621155875892,0.701794825336225,0.644613162144895,0.765153328275374,0.220591419119515,0.695603506861264 | |phase1_expression=1.12104192973356,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.436050312760893,0,0.777719596297134,0,0,0,0,0,0,0,0,4.65327859977075,2.11596391708813,3.1691570175309,1.0165335962074,0,0,0,0,0,0.384218305321555,1.03689612308478,0.405017814995072,0.210324961351382,1.71390590642282,1.10434270475807,1.10241719293459,2.58782771749238,0.919218786610021,3.30347642998166,2.42605942361857,2.91852413186863,3.56092976871523,3.47653045689157,7.29278718779464,1.11673199600552,2.8138130501584,1.98637722109853,2.06240009831567,3.27454865837937,2.79599168737951,0.075726193333184,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.1875371125186,1.21439728736295,0.608930956624282,0.230615497256059,0.301445281105245,1.88141931417128,0.502666365318702,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,13.7606974595427,9.63454851341893,0,0,0,0,7.04016005202667,2.74500361691176,6.03140890141749,2.9550134432687,2.04572365864264,3.32460871295296,4.05603157669394,2.54598409625791,0.248813941220186,0,2.10441855886474,1.69156575851515,1.37941262660084,1.98068342785884,2.56198190320716,5.44291993210623,5.12454881139399,3.18585863503078,3.88055056108524,2.58681591519411,0.756424320671277,2.46331573829528,1.09597866213787,1.66828349535359,1.39300866608867,0.205782136407943,0.796137067273973,0,0,0,1.86413195281952,2.81431271977315,1.62055855314913,2.3674473558521,1.57411385397923,1.85120535464854,1.39520366850245,0,1.5179494507732,1.15191894939436,1.14917224855367,0.810688095458557,0.584799949701329,0.658650345873152,0.805238512562231,1.05144974282064,1.64647379806855,0,0.264450566663544,0.853153002140936,0.928946687441754,0.644337306610467,1.61346819698674,0.667134131534611,0.951128130562796,0,0.164698954724011,0.251335208800269,0.795825888164603,0.779856348476481,0,0.216138049874694,0,0.758671603812327,1.25673363870702,2.25415471346161,0.407302655690628,0.969762435838129,0.771494018793504,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0.482443521363367,0.369506380333209,0.757965647081939,0.814824882210129,0.509235257325564,0.234690248288502,0.167506257441816,0.238043640886014,0.195133647857799,0.472905432318573,0.44292937929755,0.637819074629948,0.327726629431476,0.345369963731791,0,0,0,0.491764273019036,1.37968373152366,3.21101179975584,4.10240903072711,0,0,0,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0.809621403349789,2.04579100537918,1.18586333383957,6.74774764485795,2.98074178937364,1.42452482933804,0.651547837414304,0.659880491890142,0,2.6705869977048,1.81394134178851,3.01768127609437,1.18120757152309,2.15204603560749,1.29214146584111,0.727067458955011,1.06949213515416,0.948110273807448,0,0,2.38307724027652,2.52085531643834,1.81102157295856,2.14337035031592,3.19212420556092,2.31879462882692,1.15184314421485,2.13125464380219,0,0,0.882113592219848,0.8244312647074,0.645857706783622,0.603129249281559,0.238744688006273,0,1.1659233465194,4.07935664423121,0,1.857481811669,0.555583582109135,0,0.136694227721025,0,0,0,0,1.90934123603023,3.32152793260192,2.64315307264903,1.29606408986162,1.04544148007234,0.436725127492355,1.21377911746339,1.23980183588004,0,0.129614973291793,0,0,0.747582730219894,1.82004339502807,1.55560950675238,0.774958940866387,2.02747350588934,3.0512882047896,1.17183946359555,0.629156066554265,0,0,0,0.405450430580328,0.718976700153791,0.77952493786677,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,1.50471631210609,4.51801474093653,1.38097570952153,0.572895513439397,1.03111909406213,2.05524755931193,3.0215755895588,0.675022500231806,3.15224842256954,3.62513927187364,0.51776031175182,2.07574695168353,1.59609949360412,1.36586884603307,1.21553358534147,0.419226325255965,1.2869045591501,1.33348036680969,2.06035057238894,0.320919209591815,0.252697211763798,1.77435509923168,0.754505365544305,0.842773567228942,1.02440243847791,0.689225627467359,0.952587382566147,1.0429589335037,0.38581844092741,0.412085900803307,1.47198920134397,1.71434626192708,2.12970967391205,0.715308569841963,1.45346416632329,1.2234219453993,1.77690676572521,0.365855945745545,1.31534855718921,1.35804113845862,1.12228454331548,0.474540072496697,1.37906275325789,1.63692417267876,0.619747364743864,1.92906610981141,0.499621155875892,0.701794825336225,0.644613162144895,0.765153328275374,0.220591419119515,0.695603506861264 | ||
|short_description=p@chr3:133902218..133902243,+ | |short_description=p@chr3:133902218..133902243,+ | ||
}} | }} |
Latest revision as of 01:49, 6 August 2015
Short description: | p@chr3:133902218..133902243, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:133902218..133902243, + |
Coexpression cluster: | MCL_coexpression_mm9:1454 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.82e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.82e-10 | 23 |