FFCP PHASE1:Mm9::chr8:86707764..86707815,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |MCL_coexpression_id=321 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:86707764..86707815,- | |||
|description=CAGE_peak_at_chr8:86707764..86707815,- | |description=CAGE_peak_at_chr8:86707764..86707815,- | ||
|id=chr8:86707764..86707815,- | |id=chr8:86707764..86707815,- | ||
|ontology_enrichment_celltype=CL:0000540!5.85e-13!33;CL:0000047!5.85e-13!33;CL:0000031!5.85e-13!33;CL:0000404!5.85e-13!33;CL:0000117!5.55e-10!23;CL:0000337!5.55e-10!23;CL:0000393!1.09e-09!39;CL:0000211!1.09e-09!39;CL:0002319!2.03e-08!43;CL:0000221!2.07e-08!44;CL:0000133!2.07e-08!44 | |ontology_enrichment_celltype=CL:0000540!5.85e-13!33;CL:0000047!5.85e-13!33;CL:0000031!5.85e-13!33;CL:0000404!5.85e-13!33;CL:0000117!5.55e-10!23;CL:0000337!5.55e-10!23;CL:0000393!1.09e-09!39;CL:0000211!1.09e-09!39;CL:0002319!2.03e-08!43;CL:0000221!2.07e-08!44;CL:0000133!2.07e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.63e-14,33;CL:0000047,7.63e-14,33;CL:0000031,7.63e-14,33;CL:0000404,7.63e-14,33;CL:0000117,1.23e-10,23;CL:0000337,1.23e-10,23;CL:0000393,1.11e-09,39;CL:0000211,1.11e-09,39;CL:0002319,3.49e-08,43;CL:0000221,3.50e-08,44;CL:0000133,3.50e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.99e-12!73;UBERON:0005743!3.99e-12!73;UBERON:0000073!2.38e-11!75;UBERON:0001016!2.38e-11!75;UBERON:0002346!2.41e-11!71;UBERON:0003075!2.41e-11!71;UBERON:0007284!2.41e-11!71;UBERON:0004121!4.45e-11!102;UBERON:0000924!4.45e-11!102;UBERON:0006601!4.45e-11!102;UBERON:0003056!2.63e-10!49;UBERON:0000033!2.84e-09!63;UBERON:0001049!1.00e-08!52;UBERON:0005068!1.00e-08!52;UBERON:0006241!1.00e-08!52;UBERON:0007135!1.00e-08!52;UBERON:0002020!8.81e-08!34;UBERON:0000955!3.42e-07!50;UBERON:0006238!3.42e-07!50;UBERON:0002616!3.84e-07!49;UBERON:0003080!5.22e-07!40;UBERON:0002780!7.65e-07!39;UBERON:0001890!7.65e-07!39;UBERON:0006240!7.65e-07!39;UBERON:0000468!9.47e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!3.99e-12!73;UBERON:0005743!3.99e-12!73;UBERON:0000073!2.38e-11!75;UBERON:0001016!2.38e-11!75;UBERON:0002346!2.41e-11!71;UBERON:0003075!2.41e-11!71;UBERON:0007284!2.41e-11!71;UBERON:0004121!4.45e-11!102;UBERON:0000924!4.45e-11!102;UBERON:0006601!4.45e-11!102;UBERON:0003056!2.63e-10!49;UBERON:0000033!2.84e-09!63;UBERON:0001049!1.00e-08!52;UBERON:0005068!1.00e-08!52;UBERON:0006241!1.00e-08!52;UBERON:0007135!1.00e-08!52;UBERON:0002020!8.81e-08!34;UBERON:0000955!3.42e-07!50;UBERON:0006238!3.42e-07!50;UBERON:0002616!3.84e-07!49;UBERON:0003080!5.22e-07!40;UBERON:0002780!7.65e-07!39;UBERON:0001890!7.65e-07!39;UBERON:0006240!7.65e-07!39;UBERON:0000468!9.47e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.30e-12,64;UBERON:0003075,1.30e-12,64;UBERON:0007284,1.30e-12,64;UBERON:0001017,4.21e-12,73;UBERON:0004121,4.73e-12,95;UBERON:0000924,4.73e-12,95;UBERON:0006601,4.73e-12,95;UBERON:0010371,1.89e-11,73;UBERON:0001016,4.09e-11,75;UBERON:0003056,2.76e-10,49;UBERON:0010314,2.53e-09,92;UBERON:0000073,3.94e-09,54;UBERON:0001049,1.67e-08,52;UBERON:0005068,1.67e-08,52;UBERON:0006241,1.67e-08,52;UBERON:0007135,1.67e-08,52;UBERON:0002020,3.87e-08,34;UBERON:0003080,4.47e-07,40;UBERON:0000955,6.10e-07,47;UBERON:0006238,6.10e-07,47;UBERON:0002780,6.73e-07,39;UBERON:0001890,6.73e-07,39;UBERON:0006240,6.73e-07,39;UBERON:0002616,6.90e-07,46 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0.233612640595526,0.516493293766305,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.137114433605739,0.42438965179803,1.02051948181284,3.07801948722744,1.04479915655574,0.319984845586813,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0.523523743973798,0,0,0,1.25896817975577,0.202753862439029,0.734187008646726,0.782391344348039,1.09012578190223,0.878744730937887,0.194429899074283,0.55994568650145,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,8.49729135610311,4.7609188134483,4.43681982454325,0.677689064138264,0,0,0,0.7104801149461,1.19840044207362,1.53687322128622,4.97710139080693,7.42532660824299,3.99617426567626,5.14171771926846,3.97563373712904,4.5321595709533,5.55903731905771,4.5960939330501,2.20231761998777,1.53224805702225,1.99688493233117,5.93488294785872,7.86793734980723,11.4600941522487,1.3959149950069,3.93933827022176,1.98637722109853,3.83017161115768,4.12877874317399,9.13357284543973,0.227178579999552,0.529000920747499,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0.29688427812965,1.73485326766136,0.608930956624282,0.691846491768175,1.20578112442098,2.11659672844269,0.251333182659351,0,0,0.884610551949874,1.13236794963186,0.883366073841574,0.484875253135222,0,2.04946557908083,4.39838084308256,0.255457055208591,1.07833612055328,1.19980546198682,1.52484272487678,2.69623150928681,1.37250180845588,7.79056983099759,1.56441888173049,1.27857728665165,0.83115217823824,1.62241263067758,4.17541391786297,1.24406970610093,0.252722758433675,0.841767423545896,5.46505860443356,3.44853156650209,5.76198815377118,5.72678307775717,10.0694018743965,6.02134485338794,8.05834831213668,2.58703370739016,4.095791865724,5.10586416453112,5.45448484908241,1.97276159184817,3.05851974148158,1.74126083261083,2.88094990971121,4.97585667046233,0,1.54408744268829,1.42081749697796,2.07125772535502,3.28336483973535,1.80062061461015,2.60419209143731,2.55793501271625,3.23960937063494,0.465067889500816,1.07309360559848,3.38619492864792,1.81015834904829,2.79084688934462,1.78351381000883,0.292399974850665,0.439100230582101,1.34206418760372,1.47202963994889,7.82075054082562,0,0.264450566663544,5.75878276445132,7.19933682767359,2.83508414908605,1.61346819698674,1.55664630691409,0.570676878337677,0,0.164698954724011,0.502670417600539,1.39269530428806,1.36474860983384,0.898819408654221,0.432276099749388,0,4.74169752382704,5.02693455482807,3.38123207019241,3.05476991767971,4.07300223052014,4.55882829287071,2.84564417059158,0.295220295959204,0.31399745568275,0.370191491765402,0,0.667380422864376,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,3.03186258832776,3.25929952884052,4.07388205860452,3.05097322775053,2.84760637651087,2.14239276797412,1.75620283072019,2.67979744980525,5.09368786192182,4.9430978283821,1.14704320301017,2.07221978239075,1.01254341007058,0,0,0.491764273019036,0.275936746304732,1.28440471990234,2.22702204525186,0.491804836130026,0,3.78609863299508,1.56175497718655,4.73931475012158,3.82350076724083,3.7875774594007,3.39691836946599,4.45291771842384,2.92255857911312,4.74345333535828,1.92792789853084,0.851640511249612,3.73937767701236,5.04949573996086,1.81467135269789,0,2.42780636154981,2.41858845571801,1.32023555829129,0.590603785761546,1.53717573971964,0.775284879504663,2.54473610634254,0.712994756769443,0.948110273807448,0,0,1.02131881726136,4.86164953884538,7.76152102696527,5.35842587578981,1.59606210278046,2.49716344642899,2.13913726782757,2.13125464380219,0,0,0.220528398054962,1.48397627647332,1.61464426695906,2.11095237248546,1.07435109602823,1.31312719796049,0.582961673259701,0.556275906031529,0,2.06386867963222,1.66675074632741,0.941842285023455,0.546776910884101,0,1.35982743995084,0.979660166265606,1.38199973804424,0.954670618015114,5.06137589729817,2.64315307264903,2.48412283890143,1.67270636811575,1.31017538247707,1.75323650300267,1.40510874733071,0,0.518459893167171,0,0,5.08356256549528,3.14371131868485,5.05573089694524,2.58319646955462,4.39285926276023,3.16864544343536,4.81756223922615,2.41176492179135,0.724752362478018,0,0.632022241256357,1.21635129174099,1.23253148597793,1.03936658382236,1.07416017400489,0.79472541912506,1.9231271923195,1.62458479892035,1.61546319917036,2.89585865288999,1.51239277705261,1.55932609183604,1.34696578296461,1.63627663054197,0,0.665957860122194,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0.73260649706906,1.50057865355346,0,1.12950368523413,2.30162618253588,3.43737308063638,3.26521046453006,2.05524755931193,3.0215755895588,0,4.5032120322422,1.35942722695261,1.03552062350364,3.1136204275253,3.19219898720825,4.60980735536162,2.91728060481953,1.25767897576789,0.919217542250071,3.55594764482584,2.88449080134452,2.24643446714271,2.02157769411038,2.78827229879264,2.82939512079114,2.71560371662659,3.20125762024346,2.92920891673628,3.81034953026459,3.1288768005111,4.62982129112892,2.06042950401653,2.06078488188156,3.42869252385415,2.66213709239006,1.90748951957857,2.61623549938191,3.3879376949519,2.45382362885862,2.92684756596436,2.89376682581627,3.80251518768413,3.36685362994643,3.6776855618494,2.46261205938909,2.86461730218783,1.23949472948773,2.70069255373598,3.2475375131933,2.10538447600868,2.79332370262788,1.91288332068843,1.10295709559758,0.927471342481686 | |phase1_expression=2.40223270657191,0,0,0,0,0,0.233612640595526,0.516493293766305,0,0,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0.137114433605739,0.42438965179803,1.02051948181284,3.07801948722744,1.04479915655574,0.319984845586813,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.612508068787107,0,0,0.523523743973798,0,0,0,1.25896817975577,0.202753862439029,0.734187008646726,0.782391344348039,1.09012578190223,0.878744730937887,0.194429899074283,0.55994568650145,0,0,0,0.336093799142464,0.257259436035947,0.286533439938757,0.515672092277442,8.49729135610311,4.7609188134483,4.43681982454325,0.677689064138264,0,0,0,0.7104801149461,1.19840044207362,1.53687322128622,4.97710139080693,7.42532660824299,3.99617426567626,5.14171771926846,3.97563373712904,4.5321595709533,5.55903731905771,4.5960939330501,2.20231761998777,1.53224805702225,1.99688493233117,5.93488294785872,7.86793734980723,11.4600941522487,1.3959149950069,3.93933827022176,1.98637722109853,3.83017161115768,4.12877874317399,9.13357284543973,0.227178579999552,0.529000920747499,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0.29688427812965,1.73485326766136,0.608930956624282,0.691846491768175,1.20578112442098,2.11659672844269,0.251333182659351,0,0,0.884610551949874,1.13236794963186,0.883366073841574,0.484875253135222,0,2.04946557908083,4.39838084308256,0.255457055208591,1.07833612055328,1.19980546198682,1.52484272487678,2.69623150928681,1.37250180845588,7.79056983099759,1.56441888173049,1.27857728665165,0.83115217823824,1.62241263067758,4.17541391786297,1.24406970610093,0.252722758433675,0.841767423545896,5.46505860443356,3.44853156650209,5.76198815377118,5.72678307775717,10.0694018743965,6.02134485338794,8.05834831213668,2.58703370739016,4.095791865724,5.10586416453112,5.45448484908241,1.97276159184817,3.05851974148158,1.74126083261083,2.88094990971121,4.97585667046233,0,1.54408744268829,1.42081749697796,2.07125772535502,3.28336483973535,1.80062061461015,2.60419209143731,2.55793501271625,3.23960937063494,0.465067889500816,1.07309360559848,3.38619492864792,1.81015834904829,2.79084688934462,1.78351381000883,0.292399974850665,0.439100230582101,1.34206418760372,1.47202963994889,7.82075054082562,0,0.264450566663544,5.75878276445132,7.19933682767359,2.83508414908605,1.61346819698674,1.55664630691409,0.570676878337677,0,0.164698954724011,0.502670417600539,1.39269530428806,1.36474860983384,0.898819408654221,0.432276099749388,0,4.74169752382704,5.02693455482807,3.38123207019241,3.05476991767971,4.07300223052014,4.55882829287071,2.84564417059158,0.295220295959204,0.31399745568275,0.370191491765402,0,0.667380422864376,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0.486405680325106,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0.184753190166605,3.03186258832776,3.25929952884052,4.07388205860452,3.05097322775053,2.84760637651087,2.14239276797412,1.75620283072019,2.67979744980525,5.09368786192182,4.9430978283821,1.14704320301017,2.07221978239075,1.01254341007058,0,0,0.491764273019036,0.275936746304732,1.28440471990234,2.22702204525186,0.491804836130026,0,3.78609863299508,1.56175497718655,4.73931475012158,3.82350076724083,3.7875774594007,3.39691836946599,4.45291771842384,2.92255857911312,4.74345333535828,1.92792789853084,0.851640511249612,3.73937767701236,5.04949573996086,1.81467135269789,0,2.42780636154981,2.41858845571801,1.32023555829129,0.590603785761546,1.53717573971964,0.775284879504663,2.54473610634254,0.712994756769443,0.948110273807448,0,0,1.02131881726136,4.86164953884538,7.76152102696527,5.35842587578981,1.59606210278046,2.49716344642899,2.13913726782757,2.13125464380219,0,0,0.220528398054962,1.48397627647332,1.61464426695906,2.11095237248546,1.07435109602823,1.31312719796049,0.582961673259701,0.556275906031529,0,2.06386867963222,1.66675074632741,0.941842285023455,0.546776910884101,0,1.35982743995084,0.979660166265606,1.38199973804424,0.954670618015114,5.06137589729817,2.64315307264903,2.48412283890143,1.67270636811575,1.31017538247707,1.75323650300267,1.40510874733071,0,0.518459893167171,0,0,5.08356256549528,3.14371131868485,5.05573089694524,2.58319646955462,4.39285926276023,3.16864544343536,4.81756223922615,2.41176492179135,0.724752362478018,0,0.632022241256357,1.21635129174099,1.23253148597793,1.03936658382236,1.07416017400489,0.79472541912506,1.9231271923195,1.62458479892035,1.61546319917036,2.89585865288999,1.51239277705261,1.55932609183604,1.34696578296461,1.63627663054197,0,0.665957860122194,0.0897138566094757,0.335769232728157,0.19318959403219,0.187682475451182,0.73260649706906,1.50057865355346,0,1.12950368523413,2.30162618253588,3.43737308063638,3.26521046453006,2.05524755931193,3.0215755895588,0,4.5032120322422,1.35942722695261,1.03552062350364,3.1136204275253,3.19219898720825,4.60980735536162,2.91728060481953,1.25767897576789,0.919217542250071,3.55594764482584,2.88449080134452,2.24643446714271,2.02157769411038,2.78827229879264,2.82939512079114,2.71560371662659,3.20125762024346,2.92920891673628,3.81034953026459,3.1288768005111,4.62982129112892,2.06042950401653,2.06078488188156,3.42869252385415,2.66213709239006,1.90748951957857,2.61623549938191,3.3879376949519,2.45382362885862,2.92684756596436,2.89376682581627,3.80251518768413,3.36685362994643,3.6776855618494,2.46261205938909,2.86461730218783,1.23949472948773,2.70069255373598,3.2475375131933,2.10538447600868,2.79332370262788,1.91288332068843,1.10295709559758,0.927471342481686 | ||
|short_description=p@chr8:86707764..86707815,- | |short_description=p@chr8:86707764..86707815,- | ||
}} | }} |
Latest revision as of 05:26, 4 August 2015
Short description: | p@chr8:86707764..86707815, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86707764..86707815, - |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.63e-14 | 33 |
neuronal stem cell | 7.63e-14 | 33 |
neuroblast | 7.63e-14 | 33 |
electrically signaling cell | 7.63e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.23e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-10 | 23 |
electrically responsive cell | 1.11e-09 | 39 |
electrically active cell | 1.11e-09 | 39 |
neural cell | 3.49e-08 | 43 |
ectodermal cell | 3.50e-08 | 44 |
neurectodermal cell | 3.50e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.30e-12 | 64 |
neural plate | 1.30e-12 | 64 |
presumptive neural plate | 1.30e-12 | 64 |
central nervous system | 4.21e-12 | 73 |
ectoderm-derived structure | 4.73e-12 | 95 |
ectoderm | 4.73e-12 | 95 |
presumptive ectoderm | 4.73e-12 | 95 |
ecto-epithelium | 1.89e-11 | 73 |
nervous system | 4.09e-11 | 75 |
pre-chordal neural plate | 2.76e-10 | 49 |
structure with developmental contribution from neural crest | 2.53e-09 | 92 |
regional part of nervous system | 3.94e-09 | 54 |
neural tube | 1.67e-08 | 52 |
neural rod | 1.67e-08 | 52 |
future spinal cord | 1.67e-08 | 52 |
neural keel | 1.67e-08 | 52 |
gray matter | 3.87e-08 | 34 |
anterior neural tube | 4.47e-07 | 40 |
brain | 6.10e-07 | 47 |
future brain | 6.10e-07 | 47 |
regional part of forebrain | 6.73e-07 | 39 |
forebrain | 6.73e-07 | 39 |
future forebrain | 6.73e-07 | 39 |
regional part of brain | 6.90e-07 | 46 |