FFCP PHASE1:Hg19::chr2:71681572..71681579,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:71681572..71681579,-
|short_description=p@chr2:71681572..71681579,-
|description=CAGE_peak_at_chr2:71681572..71681579,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:71681572..71681579,- | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_at_chr2:71681572..71681579,- | |||
|id=chr2:71681572..71681579,- | |||
|ontology_enrichment_celltype=CL:0000115!1.55e-32!35;CL:0002139!8.50e-31!24;CL:0002078!7.90e-24!44;CL:0000071!3.31e-21!18;CL:0002546!3.31e-21!18;CL:0000213!3.17e-16!57;CL:0000215!3.17e-16!57;CL:0000222!4.39e-12!119;CL:0005020!2.28e-11!6;CL:0002138!2.28e-11!6;CL:0005022!2.28e-11!6;CL:0002543!1.26e-10!6;CL:1000413!5.89e-08!9;CL:0000188!2.81e-07!9;CL:0002544!4.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.25e-55;24!CL:0000115;2.91e-54;36!CL:0002138;3.20e-33;6!CL:0002078;1.16e-32;45!CL:0000071;3.97e-28;18!CL:0000213;1.93e-22;58!CL:0000215;1.93e-22;58!CL:0002543;9.83e-22;6!CL:0002144;7.24e-18;3!CL:0002188;1.47e-16;5!CL:0002618;2.96e-16;3!CL:0002262;4.80e-12;2!CL:1000398;4.80e-12;2!CL:1000746;7.03e-12;7!CL:1000612;7.03e-12;7!CL:0002681;5.61e-07;12!CL:0002584;5.61e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.97e-68,36;CL:0002139,7.12e-55,24;CL:0002078,3.04e-53,45;CL:0000213,3.26e-40,58;CL:0000215,3.26e-40,58;CL:0005020,3.40e-33,6;CL:0002138,3.40e-33,6;CL:0005022,3.40e-33,6;CL:0000071,3.11e-28,18;CL:0002546,3.11e-28,18;CL:0002543,5.10e-22,6;CL:0000222,1.85e-18,121;CL:0002144,7.26e-18,3;CL:0002188,1.42e-16,5;CL:0002618,1.70e-16,3;CL:0002262,4.68e-12,2;CL:1000398,4.68e-12,2;CL:1000746,6.84e-12,7;CL:1000612,6.84e-12,7;CL:0002321,4.59e-07,250;CL:0002681,5.53e-07,12;CL:0002584,5.53e-07,12;CL:0000076,9.13e-07,63 | |||
|ontology_enrichment_development_v019=CL:0005022;3.20e-33;6!CL:0002546;3.97e-28;18!CL:0000222;2.12e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.31e-21!18;UBERON:0004638!3.31e-21!18;UBERON:0004852!3.31e-21!18;UBERON:0000487!2.13e-16!22;UBERON:0000055!7.97e-15!69;UBERON:0007023!4.59e-14!115;UBERON:0006914!8.04e-14!25;UBERON:0002049!1.12e-13!79;UBERON:0007798!1.12e-13!79;UBERON:0001009!1.61e-12!113;UBERON:0004872!2.91e-11!84;UBERON:0004535!1.55e-10!110;UBERON:0001981!2.57e-10!60;UBERON:0007500!2.57e-10!60;UBERON:0004537!2.57e-10!60;UBERON:0006965!2.57e-10!60;UBERON:0002465!2.81e-10!10;UBERON:0000477!4.06e-09!286;UBERON:0004111!4.22e-09!241;UBERON:0003914!5.87e-09!118;UBERON:0001638!1.29e-08!9;UBERON:0003920!1.29e-08!9;UBERON:0004582!1.29e-08!9;UBERON:0001473!3.30e-08!8;UBERON:0004536!3.30e-08!8;UBERON:0006558!3.30e-08!8;UBERON:0000119!3.74e-08!312;UBERON:0000483!5.63e-08!309;UBERON:0003915!5.89e-08!9;UBERON:0004700!5.89e-08!9;UBERON:0001917!5.89e-08!9;UBERON:0000468!9.05e-08!659;UBERON:0000025!1.07e-07!194;UBERON:0000490!1.38e-07!138;UBERON:0000467!2.32e-07!625;UBERON:0000480!2.65e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.97e-28;18!UBERON:0001986;3.97e-28;18!UBERON:0004852;3.97e-28;18!UBERON:0001473;8.78e-25;8!UBERON:0004536;8.78e-25;8!UBERON:0006558;8.78e-25;8!UBERON:0000487;1.12e-22;22!UBERON:0006914;9.82e-20;25!UBERON:0002465;1.03e-19;10!UBERON:0010523;7.24e-18;3!UBERON:0001915;7.24e-18;3!UBERON:0001982;7.24e-18;3!UBERON:0001638;1.97e-14;9!UBERON:0003920;1.97e-14;9!UBERON:0004582;1.97e-14;9!UBERON:0000055;1.48e-13;65!UBERON:0000490;4.37e-12;33!UBERON:0000353;4.72e-12;15!UBERON:0001281;4.80e-12;2!UBERON:0003497;4.80e-12;2!UBERON:0003909;4.80e-12;2!UBERON:0003835;4.80e-12;2!UBERON:0000074;7.03e-12;7!UBERON:0001229;7.03e-12;7!UBERON:0002081;1.90e-11;2!UBERON:0000341;3.40e-11;2!UBERON:0002049;3.49e-11;75!UBERON:0007798;3.49e-11;75!UBERON:0002066;5.83e-10;5!UBERON:0001009;2.90e-09;112!UBERON:0001280;2.62e-08;3!UBERON:0004647;2.62e-08;3!UBERON:0004535;3.79e-08;109!UBERON:0001723;4.98e-08;3!UBERON:0001033;4.98e-08;3!UBERON:0003978;6.48e-08;3!UBERON:0004151;6.48e-08;3!UBERON:0000946;6.48e-08;3!UBERON:0003914;7.88e-08;74!UBERON:0007500;2.72e-07;56!UBERON:0001981;2.72e-07;56!UBERON:0004537;2.72e-07;56!UBERON:0001225;5.61e-07;12!UBERON:0008987;5.61e-07;12!UBERON:0002405;6.64e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.11e-28,18;UBERON:0001986,3.11e-28,18;UBERON:0004852,3.11e-28,18;UBERON:0000055,1.40e-27,68;UBERON:0002049,5.43e-26,78;UBERON:0007798,5.43e-26,78;UBERON:0001473,9.17e-25,8;UBERON:0004536,9.17e-25,8;UBERON:0006558,9.17e-25,8;UBERON:0000487,9.18e-23,22;UBERON:0001009,1.68e-20,112;UBERON:0006914,8.26e-20,25;UBERON:0002465,1.07e-19,10;UBERON:0004535,3.57e-19,109;UBERON:0010523,7.26e-18,3;UBERON:0001915,7.26e-18,3;UBERON:0001982,7.26e-18,3;UBERON:0007500,6.45e-15,59;UBERON:0001981,6.45e-15,59;UBERON:0004537,6.45e-15,59;UBERON:0006965,6.45e-15,59;UBERON:0001638,1.28e-14,9;UBERON:0003920,1.28e-14,9;UBERON:0004582,1.28e-14,9;UBERON:0003914,1.08e-13,117;UBERON:0000353,4.59e-12,15;UBERON:0001281,4.68e-12,2;UBERON:0003497,4.68e-12,2;UBERON:0003909,4.68e-12,2;UBERON:0003835,4.68e-12,2;UBERON:0010532,6.84e-12,7;UBERON:0000074,6.84e-12,7;UBERON:0001229,6.84e-12,7;UBERON:0001230,6.84e-12,7;UBERON:0003220,6.84e-12,7;UBERON:0005749,6.84e-12,7;UBERON:0004199,6.84e-12,7;UBERON:0004209,6.84e-12,7;UBERON:0004198,6.84e-12,7;UBERON:0004111,1.53e-11,240;UBERON:0000341,1.90e-11,2;UBERON:0002081,2.11e-11,2;UBERON:0010227,2.11e-11,2;UBERON:0004872,2.40e-11,83;UBERON:0005103,2.01e-10,8;UBERON:0000083,2.01e-10,8;UBERON:0009201,2.01e-10,8;UBERON:0006553,2.01e-10,8;UBERON:0003074,2.01e-10,8;UBERON:0003060,2.01e-10,8;UBERON:0002066,4.20e-10,5;UBERON:0000058,2.09e-09,19;UBERON:0000080,2.80e-09,9;UBERON:0002120,2.80e-09,9;UBERON:0004875,2.80e-09,9;UBERON:0005721,2.80e-09,9;UBERON:0005754,2.80e-09,9;UBERON:0007297,2.80e-09,9;UBERON:0001280,2.57e-08,3;UBERON:0004647,2.57e-08,3;UBERON:0005171,2.57e-08,3;UBERON:0001723,5.25e-08,3;UBERON:0001033,5.25e-08,3;UBERON:0010056,5.25e-08,3;UBERON:0003978,6.05e-08,3;UBERON:0009751,6.05e-08,3;UBERON:0000946,6.05e-08,3;UBERON:0002523,6.05e-08,3;UBERON:0005983,6.05e-08,3;UBERON:0002165,6.05e-08,3;UBERON:0002062,6.05e-08,3;UBERON:0007280,6.05e-08,3;UBERON:0004151,6.96e-08,3;UBERON:0004876,1.30e-07,11;UBERON:0001225,5.53e-07,12;UBERON:0008987,5.53e-07,12;UBERON:0003887,5.53e-07,12 | |||
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|short_description=p@chr2:71681572..71681579,- | |||
}} | }} |
Latest revision as of 12:03, 29 July 2015
Short description: | p@chr2:71681572..71681579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:71681572..71681579, - |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.97e-68 | 36 |
endothelial cell of vascular tree | 7.12e-55 | 24 |
meso-epithelial cell | 3.04e-53 | 45 |
lining cell | 3.26e-40 | 58 |
barrier cell | 3.26e-40 | 58 |
lymphangioblast | 3.40e-33 | 6 |
endothelial cell of lymphatic vessel | 3.40e-33 | 6 |
vascular lymphangioblast | 3.40e-33 | 6 |
blood vessel endothelial cell | 3.11e-28 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.11e-28 | 18 |
vein endothelial cell | 5.10e-22 | 6 |
mesodermal cell | 1.85e-18 | 121 |
capillary endothelial cell | 7.26e-18 | 3 |
glomerular endothelial cell | 1.42e-16 | 5 |
endothelial cell of umbilical vein | 1.70e-16 | 3 |
endothelial cell of sinusoid | 4.68e-12 | 2 |
endothelial cell of hepatic sinusoid | 4.68e-12 | 2 |
glomerular cell | 6.84e-12 | 7 |
kidney corpuscule cell | 6.84e-12 | 7 |
embryonic cell | 4.59e-07 | 250 |
kidney cortical cell | 5.53e-07 | 12 |
renal cortical epithelial cell | 5.53e-07 | 12 |
squamous epithelial cell | 9.13e-07 | 63 |