FFCP PHASE1:Hg19::chr2:99757606..99757620,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:99757606..99757620,-
|short_description=p3@TSGA10
|description=CAGE_peak_3_at_TSGA10_5end
|association_with_transcript=0bp_to_ENST00000464459,ENST000004899...") |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80705 | |EntrezGene=80705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14927 | |HGNC=14927 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z925 | |UniProt=B7Z925 | ||
|association_with_transcript=0bp_to_ENST00000464459,ENST00000489926,ENST00000542655,uc002szj.1,uc010yvn.1_5end | |||
|cluster_id=chr2:99757606..99757620,- | |||
|description=CAGE_peak_3_at_TSGA10_5end | |||
|id=chr2:99757606..99757620,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!7.24e-10!106;DOID:0050687!1.06e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.79e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.51e-17!115;UBERON:0001049!3.24e-14!57;UBERON:0005068!3.24e-14!57;UBERON:0006241!3.24e-14!57;UBERON:0007135!3.24e-14!57;UBERON:0002616!2.40e-11!59;UBERON:0002780!3.65e-11!41;UBERON:0001890!3.65e-11!41;UBERON:0006240!3.65e-11!41;UBERON:0001017!7.49e-11!82;UBERON:0003080!1.88e-10!42;UBERON:0000955!2.09e-10!69;UBERON:0006238!2.09e-10!69;UBERON:0005743!4.45e-10!86;UBERON:0001893!6.96e-09!34;UBERON:0002020!8.20e-09!34;UBERON:0003528!8.20e-09!34;UBERON:0000073!1.15e-08!94;UBERON:0001016!1.15e-08!94;UBERON:0002791!2.08e-08!33;UBERON:0003075!6.56e-08!86;UBERON:0007284!6.56e-08!86;UBERON:0002346!8.22e-08!90;UBERON:0001869!8.81e-08!32;UBERON:0002308!5.81e-07!9;UBERON:0000125!5.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.26e-13;53!UBERON:0002616;7.26e-13;53!UBERON:0002780;8.61e-13;41!UBERON:0001890;8.61e-13;41!UBERON:0001893;1.09e-12;34!UBERON:0003528;7.15e-12;34!UBERON:0002020;7.15e-12;34!UBERON:0002791;1.53e-11;32!UBERON:0001869;2.17e-11;32!UBERON:0000125;1.04e-09;9!UBERON:0002308;1.04e-09;9!UBERON:0002619;1.50e-09;22!UBERON:0001017;2.22e-08;75!UBERON:0001950;5.34e-08;20!UBERON:0009663;5.84e-08;7!UBERON:0000956;8.59e-08;25!UBERON:0000203;8.59e-08;25!UBERON:0002420;1.93e-07;9!UBERON:0007245;1.93e-07;9!UBERON:0010009;1.93e-07;9!UBERON:0010011;1.93e-07;9!UBERON:0000454;1.93e-07;9!UBERON:0000955;2.31e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.21e-24,56;UBERON:0005068,4.21e-24,56;UBERON:0006241,4.21e-24,56;UBERON:0007135,4.21e-24,56;UBERON:0000073,4.06e-22,53;UBERON:0002616,4.06e-22,53;UBERON:0002780,1.22e-17,41;UBERON:0001890,1.22e-17,41;UBERON:0003080,1.22e-17,41;UBERON:0006240,1.22e-17,41;UBERON:0000955,1.92e-16,68;UBERON:0006238,1.92e-16,68;UBERON:0001017,1.44e-15,81;UBERON:0001893,5.84e-15,34;UBERON:0007023,7.53e-15,114;UBERON:0003528,7.69e-15,34;UBERON:0002020,7.69e-15,34;UBERON:0001016,5.14e-14,89;UBERON:0002791,2.79e-13,32;UBERON:0001869,3.59e-13,32;UBERON:0003075,1.45e-12,82;UBERON:0007284,1.45e-12,82;UBERON:0002346,2.60e-11,86;UBERON:0010371,3.56e-10,104;UBERON:0000125,7.07e-10,9;UBERON:0002308,7.07e-10,9;UBERON:0002619,1.13e-09,22;UBERON:0003056,2.71e-09,61;UBERON:0011216,1.25e-08,223;UBERON:0009663,3.90e-08,7;UBERON:0001950,4.11e-08,20;UBERON:0000956,6.75e-08,25;UBERON:0000203,6.75e-08,25;UBERON:0003076,1.12e-07,15;UBERON:0003057,1.12e-07,15;UBERON:0002420,1.17e-07,9;UBERON:0007245,1.17e-07,9;UBERON:0010009,1.17e-07,9;UBERON:0010011,1.17e-07,9;UBERON:0000454,1.17e-07,9 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0,0.152826811495903,0.57470412614962,0.314843125254717,0.393364276848904,0.383829398097213,0.928896739896456,0,0.30120591877825,0,1.78174561334694,1.84820002233648,0.293600439334847,0,0,0.651032612147555,1.11957737119962,0.647787332037959,1.28787783817093,0.290796477559129,0.377875943688809,0.485168122375632,0.464858073811369,1.6446715520873,3.71647645074124,0.575384784644301,0.768482119587302,0.47296445977717,0,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.898893937780338,0.918251677112708,1.28371610830437,1.27867425159808,0,0.997318288108159,2.13112375266347,1.16083695451434,0,1.24564449799115,1.25624332628372,1.0429658368404,1.73751075764093,1.21079900526674,1.10483290796269,0,0,0,0.419317291016752,0,0.300353785683013,0,0,0,0,1.75996244461323,1.63841583378639,0,1.28019066769952,2.00197993518006,0,0,0,0.569212969109448,2.34894875748376,0,0,0,0.790152254325231,0.983548850569165,0.393010762749165,1.64481199199607,0.334372990781356,0.651844533267181,1.4203434172042,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.384273959177026,0.130059347559878,0,0,0,0.444859689486181,1.33770414044857,1.04535523804977,0.339928028092699,0,0.34362744548263,0.759059076058509,0.318565414324097,1.30216690771284,0,0.752875595388864,0.639933055772092,0,1.18388626022008,0.821127996921047,1.41124720257313,0.534880391567015,1.15859523106239,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.665188192387692,0.351339142772504,0.851363990735132,0,0.741568885568859,0.324547393654683,0,0.26591592103773,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0,0.775250277507987,0.71153252537342,1.00416183829401,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,1.31780417436063,3.87780264148325,0.436094052142534,0,0.12663051166458,0.662045904066094,0.286836620748814,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0,0.250237039743928,0,0,0,0.150238058906597,0,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.36373060295417,0.573609190778008,1.34171076742555,0.662648841607426,1.39432731443422,1.34759371519982,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.588664395376038,0,0,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,1.32438929824395,1.59884970106048,0.514703430895577,0,1.1240175325762,0.502644862058154,0.555530670951178,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0,1.58040879591855,0,1.23108503043699,0.702012795417713,0.445893486866185,0.93733833986777,0.335964256397719,0.850650583454319,0.716468181622786,0.290633938513962,0.766765358330422,0.492663237895943,0.880484340132261,3.93923419527467,4.32359860250884,4.92345490362882,1.07946420296687,0.381988425558278,2.34434894420094,0,0.411309970813294,0.300343057843917,0.857479297891735,0,0,0.07333828582095,0,0,0.845302752556,0,0,1.28603687131071,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0.602878754119172,0,0.99972991182057,1.2162378064119,3.01354254859276,0,0,0,0,0,0.205476322550383,0.179060963239896,7.50970464756633,0.788123040807709,1.50939302401662,1.79680250791648,0.508189248444927,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0.24538298343828,0,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.82707210449155,1.07857100409308,0.960548020230999,0.606255142892519,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,1.93375119346596,0.40101294060657,2.20994373446151,0,0,0,0.902399225814824,1.07821471946181,0,0,0.949964660035881,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,0.509752546090077,2.49322802678617,0,2.41185864310528,1.0457418040996,0.512900250232778,0,0,0.9273691048295,1.19040304263846,1.56768049849117,0,0,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0,1.4875642382488,0.768760269460425,5.10450849978336,1.4162089319777,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.709522128141196,0,0,0,0,0.577332676353072,0,0,1.03558180854457,0.43050537267123,0,0,0.229723400206959,0,0.764637207142375,0.569647187174163,0,0,1.29694662238543,0.540031437238115,0.79312517629427,1.6023610669121,0.962479855263359,0,0,0.28853842595289,1.35169502361987,0.478278818186467,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,2.55507742614196,1.03051603426729,0.307240764308458,0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| ||
|short_description=p3@TSGA10 | |||
}} | }} |
Latest revision as of 04:18, 19 September 2015
Short description: | p3@TSGA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSGA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000464459, ENST00000489926, ENST00000542655, uc002szj.1, uc010yvn.1_5end |
EntrezGene: | TSGA10 |
HGNC: | 14927 |
UniProt: | B7Z925 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.79e-07 | 106 |