FFCP PHASE1:Hg19::chr3:17784063..17784155,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:17784063..17784155,-
|short_description=p1@TBC1D5
|description=CAGE_peak_1_at_TBC1D5_5end
|association_with_transcript=0bp_to_ENST00000412981,ENST000004143...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9779 | |EntrezGene=9779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19166 | |HGNC=19166 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z3I5,C9K0P2,C9JDR8,C9JWX0,C9JW04,C9JIU4,C9J397,C9JED7 | |UniProt=F2Z3I5,C9K0P2,C9JDR8,C9JWX0,C9JW04,C9JIU4,C9J397,C9JED7 | ||
|association_with_transcript=0bp_to_ENST00000412981,ENST00000414349,ENST00000415814,ENST00000423331,ENST00000425944,ENST00000428355,ENST00000430169,ENST00000443499,ENST00000444471,ENST00000444756,ENST00000445294,ENST00000446863,ENST00000452492,ENST00000481396_5end | |||
|cluster_id=chr3:17784063..17784155,- | |||
|description=CAGE_peak_1_at_TBC1D5_5end | |||
|id=chr3:17784063..17784155,- | |||
|ontology_enrichment_celltype=CL:0000542!3.64e-09!53;CL:0000051!3.64e-09!53;CL:0000838!7.68e-09!52;CL:0000945!1.37e-08!24;CL:0000826!1.37e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.28e-08;24!CL:0000236;6.76e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.64e-09,53;CL:0000051,3.64e-09,53;CL:0000838,7.68e-09,52;CL:0000945,1.37e-08,24;CL:0000826,1.37e-08,24;CL:0000037,8.30e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-27!115;UBERON:0001049!6.00e-15!57;UBERON:0005068!6.00e-15!57;UBERON:0006241!6.00e-15!57;UBERON:0007135!6.00e-15!57;UBERON:0000955!5.11e-13!69;UBERON:0006238!5.11e-13!69;UBERON:0002616!3.92e-12!59;UBERON:0003080!6.30e-12!42;UBERON:0000073!1.32e-11!94;UBERON:0001016!1.32e-11!94;UBERON:0002780!1.51e-11!41;UBERON:0001890!1.51e-11!41;UBERON:0006240!1.51e-11!41;UBERON:0001017!1.33e-10!82;UBERON:0005743!2.52e-10!86;UBERON:0003075!4.33e-10!86;UBERON:0007284!4.33e-10!86;UBERON:0001893!7.79e-10!34;UBERON:0002020!1.03e-09!34;UBERON:0003528!1.03e-09!34;UBERON:0002346!2.09e-09!90;UBERON:0002791!2.35e-09!33;UBERON:0001869!9.55e-09!32;UBERON:0000153!2.30e-07!129;UBERON:0007811!2.30e-07!129;UBERON:0002619!4.60e-07!22;UBERON:0000956!4.73e-07!25;UBERON:0000203!4.73e-07!25;UBERON:0000033!8.60e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.27e-08;41!UBERON:0001890;1.27e-08;41!UBERON:0000073;2.36e-08;53!UBERON:0002616;2.36e-08;53!UBERON:0001893;3.12e-08;34!UBERON:0003528;4.59e-08;34!UBERON:0002020;4.59e-08;34!UBERON:0007023;5.52e-08;114!UBERON:0002791;7.95e-08;32!UBERON:0001869;1.00e-07;32!UBERON:0002619;4.58e-07;22!UBERON:0000956;5.01e-07;25!UBERON:0000203;5.01e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.12e-26,114;UBERON:0001049,1.46e-14,56;UBERON:0005068,1.46e-14,56;UBERON:0006241,1.46e-14,56;UBERON:0007135,1.46e-14,56;UBERON:0000073,3.24e-13,53;UBERON:0002616,3.24e-13,53;UBERON:0000955,1.16e-12,68;UBERON:0006238,1.16e-12,68;UBERON:0001016,1.45e-11,89;UBERON:0002780,1.51e-11,41;UBERON:0001890,1.51e-11,41;UBERON:0003080,1.51e-11,41;UBERON:0006240,1.51e-11,41;UBERON:0001017,2.77e-10,81;UBERON:0001893,7.79e-10,34;UBERON:0003528,1.03e-09,34;UBERON:0002020,1.03e-09,34;UBERON:0003075,5.03e-09,82;UBERON:0007284,5.03e-09,82;UBERON:0002791,7.97e-09,32;UBERON:0001869,9.55e-09,32;UBERON:0002346,2.21e-08,86;UBERON:0002619,4.60e-07,22;UBERON:0000956,4.73e-07,25;UBERON:0000203,4.73e-07,25 | |||
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| ||
|short_description=p1@TBC1D5 | |||
}} | }} |
Latest revision as of 20:11, 16 September 2015
Short description: | p1@TBC1D5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TBC1D5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412981, ENST00000414349, ENST00000415814, ENST00000423331, ENST00000425944, ENST00000428355, ENST00000430169, ENST00000443499, ENST00000444471, ENST00000444756, ENST00000445294, ENST00000446863, ENST00000452492, ENST00000481396_5end |
EntrezGene: | TBC1D5 |
HGNC: | 19166 |
UniProt: | F2Z3I5C9K0P2C9JDR8C9JWX0C9JW04C9JIU4C9J397C9JED7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.64e-09 | 53 |
common lymphoid progenitor | 3.64e-09 | 53 |
lymphoid lineage restricted progenitor cell | 7.68e-09 | 52 |
lymphocyte of B lineage | 1.37e-08 | 24 |
pro-B cell | 1.37e-08 | 24 |
hematopoietic stem cell | 8.30e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.12e-26 | 114 |
neural tube | 1.46e-14 | 56 |
neural rod | 1.46e-14 | 56 |
future spinal cord | 1.46e-14 | 56 |
neural keel | 1.46e-14 | 56 |
regional part of nervous system | 3.24e-13 | 53 |
regional part of brain | 3.24e-13 | 53 |
brain | 1.16e-12 | 68 |
future brain | 1.16e-12 | 68 |
nervous system | 1.45e-11 | 89 |
regional part of forebrain | 1.51e-11 | 41 |
forebrain | 1.51e-11 | 41 |
anterior neural tube | 1.51e-11 | 41 |
future forebrain | 1.51e-11 | 41 |
central nervous system | 2.77e-10 | 81 |
telencephalon | 7.79e-10 | 34 |
brain grey matter | 1.03e-09 | 34 |
gray matter | 1.03e-09 | 34 |
neural plate | 5.03e-09 | 82 |
presumptive neural plate | 5.03e-09 | 82 |
regional part of telencephalon | 7.97e-09 | 32 |
cerebral hemisphere | 9.55e-09 | 32 |
neurectoderm | 2.21e-08 | 86 |
regional part of cerebral cortex | 4.60e-07 | 22 |
cerebral cortex | 4.73e-07 | 25 |
pallium | 4.73e-07 | 25 |