Personal tools

MCL coexpression mm9:3768: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.57778613663336,-0.315657544045844,-0.315657544045844,-0.277402277802092,-0.315657544045844,-0.27072557708785,-0.285264607091465,-0.201749592921533,0.0982129906618483,0.115981845279381,-0.315657544045844,-0.304546835590316,-0.315657544045844,-0.291392559332499,-0.232413604982543,-0.262273442357099,-0.238878550338211,-0.180185396372949,-0.19561502890068,-0.175486250515101,0.198490937668422,-0.264209276749392,-0.315657544045844,-0.294172493254618,-0.285758714920221,-0.315657544045844,-0.315657544045844,-0.287409315851443,-0.315657544045844,-0.283119283986794,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.258365649746701,0.249254465581738,0.126604748723671,0.219794354380593,-0.0266884072017217,-0.258553372009741,0.0672621798837583,-0.0728921189673306,-0.114847235533987,-0.186674479602732,-0.211729718693228,-0.236697455881314,-0.273711894571188,0.133594550893428,-0.168631588954941,0.106842229951739,0.706995961533898,0.563930134756117,0.649316215953643,-0.0418296823128646,-0.131457725147052,0.35117618266268,0.428043295680482,0.243248347378755,0.048230973190965,-0.221521151922976,0.379505808365866,0.397761949338222,0.371661017164763,0.362338821931664,0.503938253963876,0.391184516821113,0.334118075690699,0.496771103078415,0.673539348245979,0.581332913707814,0.605196151329846,1.00969438788281,0.895496603489756,0.950124307405299,0.585122648460997,0.761472685646917,0.686383124049043,0.493087215899059,0.398369450530477,0.564915300253403,-0.227302068821117,-0.172696680388011,0.0260925285359661,-0.315657544045844,-0.315657544045844,-0.253178540705836,-0.243182513600424,-0.315657544045844,-0.0411486915018638,-0.190631778833951,-0.22165152255048,-0.194471322607893,0.555732593567883,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.113640017571156,0.354690602469541,0.322021725897172,0.058047757160133,0.130657892350531,0.037950986824684,0.118782027818035,0.138116642142442,0.0321651329198453,-0.109035812050823,-0.0718438331203045,0.0709880838618123,0.0027646788893516,-0.0636681891338077,0.0424697212069857,-0.163337370632989,0.0885197830548135,0.0792067557734966,-0.216855682436903,-0.196389401345364,-0.16661995464399,-0.0111524625984473,0.662619460181964,0.423736585940511,0.45791263448486,0.396856775286121,0.311713876161548,0.604348654594012,0.481242448236804,0.15114088561973,0.107959407260352,0.444277657434606,0.0498479799134978,0.32532161689714,0.253991094796237,0.300676621449723,0.179494764734317,0.296778635724332,0.303441521938169,0.220466584034208,-0.0142812974128991,0.0391196952757937,0.274472007386581,0.228849093425894,0.133076370568853,0.193597961249401,-0.00315464476025274,0.0342000784520267,0.140321319463942,-0.315657544045844,-0.189245426799513,-0.315657544045844,0.0243295467099058,0.0528093329765587,0.0720376887241049,4.4916420357298e-05,-0.122890585568333,-0.0619103108132729,-0.0786382280934378,-0.10798873161915,-0.071929657295945,-0.105441730728796,-0.0151953962010549,-0.0883984392972159,-0.0558019761800761,-0.0804659012250736,-0.139326157063153,0.110197455636749,0.311175355475985,-0.274328088156798,-0.24772297378408,0.114795349538004,0.157312366964203,0.133879809372052,0.0522078366552464,0.102593113519866,-0.0619924489883964,-0.315657544045844,-0.0724211105751312,-0.0355348455039156,0.0176286628294497,-0.038342889195777,-0.315657544045844,-0.124782958487408,-0.170062607263405,0.118274687774101,0.189770609424128,0.451171052527719,0.213812703158902,0.229400531187274,0.204081156470356,0.331718706291947,0.315051892053302,0.276774820904953,0.144491838623867,-0.278071993347146,-0.1705723405668,-0.123018731209412,-0.23253334498513,-0.246843289714257,-0.205573212378032,-0.0622682604101307,-0.242448615382665,-0.0761161777835654,-0.155449812971242,0.285889190585926,-0.154579761990602,-0.0063274311162534,-0.256463537109352,-0.291770820374811,-0.315657544045844,0.041587971159441,0.102558815840745,0.0522018745856813,0.0353493984701281,0.162415196310174,0.133367045134262,0.225157604573892,0.180199977815436,0.0688543588611006,0.193891952658015,0.0499958982287419,0.053905642617647,0.0909281404960877,0.0121100103692502,0.372966420732436,0.390666739407907,0.213445499691898,0.106936998134908,0.531099336100959,0.465454008801621,-0.160556500592157,-0.223895085938303,-0.0130443677450054,-0.0139273229872132,0.22133442064207,0.0566625900647542,0.077688301445601,0.0820404282740113,0.108268866282218,0.17726901144206,0.224854263051465,0.624383354801502,-0.00189347175525133,0.31232052236697,0.115271213772169,0.163780820039722,0.0512230740106358,0.0637576167588597,-0.0456725435144116,-0.0132905276790818,0.0113984688120205,0.0622128784877478,3.83047091019005e-05,0.0333163290111541,-0.0617818583947664,0.0275011139308812,-0.315657544045844,-0.153622210980142,1.02563647311905,0.575784869721098,0.691301714474862,0.559866132995205,0.72714605526,0.68202729751853,0.70824746204345,0.721020517563254,-0.285140378512514,-0.185571699129627,-0.164781226697636,0.144152291175945,-0.125156293239042,-0.158252187150209,-0.176828115358407,-0.233464062809372,-0.158210035792584,0.583342910912903,-0.0279807329719417,0.0701368026805927,0.0908918581662409,-0.198106534012872,-0.0983073061013101,-0.0851060834431322,0.151418750786733,0.128671460487872,0.191220141639051,-0.16105932319775,0.186227612118014,0.148883784994359,0.112820183894375,0.0827745083896634,-0.0380417261926693,-0.0389980284009122,0.0287995007797427,-0.0869066764937425,-0.174270169568821,-0.0818128480233867,-0.315657544045844,-0.0783705262798728,-0.135252662857159,-0.0578133715150069,-0.131884019980039,-0.0577654253361379,-0.0850748572449093,-0.166630069945413,-0.174950054497061,-0.284332160858017,-0.279015550522277,-0.275904357648476,-0.149402123868635,-0.103489171174665,-0.189743650686238,-0.203205101596097,-0.192550194462508,-0.268040085638902,-0.215662199909932,-0.22599757671915,-0.244779381070573,-0.289064594897814,-0.227936195513591,-0.265649347746827,-0.315657544045844,-0.202357024879956,-0.315657544045844,-0.291767101294189,-0.293190898095181,0.0326458004216675,0.0648510967561577,0.0177691512177094,-0.143763825015242,-0.156238075016899,0.181553111194202,0.121503692581693,0.0486546016387811,0.24250202621261,0.278246475815434,0.314547486426286,0.186342154289037,0.298562808489349,0.314089409355813,0.338808618499011,0.312877620230282,0.306848432286355,0.215720099793487,0.180727367484412,0.248564304922777,0.291290852890537,0.110556170239536,0.140414955098119,0.0208684987855273,0.0918505459985091,0.137588903802568,0.137448976695158,0.101871938705059,0.127360048762088,0.154887327282616,0.21187183461466,0.120320556251842,0.108618410697668,0.193453527784617,0.104748296572209,0.0983303463156766,0.0894238450164642,0.059401461651505,0.136661131012141,0.0810869443173306,0.073736106168892,0.051832723698687,0.0302459061317129,0.0455299770881974,0.0449525267428012,0.177798141601548,0.0343037033389553,0.16215964040229,0.209836008438284,0.21930784295669,0.272668888653621,0.0837554318533015,0.104339317146915,0.121384539684661,-0.0987140809688101,-0.108637527175137|coexpression_dpi_cluster_scores_median=0.581014471519708,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.214407010007589,-0.281804960444581,-0.182039178730527,-0.128793547173232,-0.165185349104694,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.245407483374562,-0.281804960444581,-0.201728807911463,-0.165185349104694,-0.16272659879628,-0.176557520796782,-0.165185349104694,0.191919994686943,-0.240692307349741,-0.281804960444581,-0.217349808070903,-0.19210847306771,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.184190180267429,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,0.294505284806324,0.184493360152513,0.217819222706133,-0.248979258111125,-0.281804960444581,0.239272605102135,0.0539696479675309,-0.0170063672515684,-0.281804960444581,-0.214442958230633,-0.263102058094666,-0.281804960444581,0.123636448452773,-0.168325536312855,0.0259785546828904,0.722698724513187,0.633459067913752,0.619770252638481,-0.0570934868135609,-0.22368259424007,0.118029041772981,0.413279492118261,0.218802306061851,0.249265129419093,-0.281804960444581,0.45528055335796,0.372386448939826,0.451939779655096,0.425686836748763,0.486026535574437,0.326963822998954,0.317117849409762,0.409731711956924,0.774738640549531,0.57122318080791,0.595373020912048,1.04409232895029,0.967203459342249,1.04689303847221,0.614792892458629,0.754724636636431,0.65470437818755,0.544491588878319,0.428209003450325,0.542451908230952,-0.166892285274908,-0.104056026817272,0.0333972354988468,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.0163582151793666,-0.154421316213097,-0.181508181131082,-0.150398178752701,0.558013829178703,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.146638861848215,0.383319018497312,0.377408514871159,-0.0105614118839891,0.0413520586982212,0.0486245531929502,0.189397876534286,0.140824581217116,0.108895368918398,-0.107341026468295,-0.00869735741718597,0.160552672213251,0.01279376036514,-0.0610368919203905,0.108180327047246,-0.165185349104694,0.0548795052810943,-0.0175098261455822,-0.183003098835639,-0.188512795250163,-0.165185349104694,-0.0681939436447653,0.608827038410799,0.386581405688625,0.335337898489341,0.392004714441395,0.327638485255361,0.48005712959608,0.349545337530739,0.117335773389136,0.0769687741732888,0.375070882911437,0.100049437967928,0.285323365294431,0.236580125458235,0.26484500706117,0.142709655975871,0.313662466641647,0.314419864087093,0.216024682448252,0.0547531351762961,0.0800736407470296,0.149873106534933,0.0668226541353163,0.158090507894381,0.0966358674153487,-0.035414222271054,0.043617699559873,0.0181752359470564,-0.281804960444581,-0.182349497210177,-0.281804960444581,-0.0719208673197773,0.0551808715497744,0.0704057745591307,0.00316168783800289,-0.165185349104694,-0.0691113210999327,-0.1159472105992,-0.0834016541034758,-0.0820972972127946,-0.107547525419653,-0.0215338142161401,-0.0706421018993009,0.0242767663205622,-0.00806301759896583,-0.110493248365681,0.146705560743955,0.307175513137871,-0.281804960444581,-0.179903105051934,-0.0108902831698403,0.137432982280326,0.0526100145002419,-0.0180140739322339,0.1594859897456,-0.0251642740681557,-0.281804960444581,-0.0989716633971646,-0.0591760889755928,0.0180905586670268,0.0137226522392729,-0.281804960444581,-0.0802024724444396,-0.136210023662141,0.119137469651387,0.0900243206875507,0.547046941643487,0.20057022415654,0.156827937529162,0.200201852275794,0.28864119761013,0.315034278600457,0.244542465541992,0.136678397192148,-0.169048308348486,-0.165185349104694,-0.0872512331836561,-0.281804960444581,-0.281804960444581,-0.187971185382887,-0.0666711170987024,-0.171991567449812,-0.064705232194138,-0.0598245828450145,0.329368303978177,-0.258365649505394,-0.0417637075292336,-0.165185349104694,-0.281804960444581,-0.281804960444581,0.0751174197103689,0.084886873952257,0.007678701754293,-0.0567593488406877,0.0553449413585645,0.0874201877121726,0.220110166842357,0.130528669111098,0.0725111895178758,0.197801691865545,0.0877494965753228,0.132176760436111,0.153856259373198,-0.0548320006657031,0.438589503342853,0.336643553428601,0.132253105918536,0.185293415607428,0.482858093542618,0.372982687769613,-0.15864943699096,-0.104285239781996,0.00745494921429785,-0.0311709162525117,0.186366634172546,0.059763569090765,0.114828599113043,0.143166080256929,0.2366466218794,0.10935593689544,0.246047400428028,0.458439144933017,0.0178288375620424,0.282977537696911,0.0805070192856325,0.168219775784268,0.0850756576118993,-0.109914391361559,-0.0764254211015877,-0.0901477671289603,0.0363766626681426,0.0429522970408863,-0.0325369063382198,0.038466232496309,-0.0327663903392945,0.0475543683145523,-0.281804960444581,-0.165185349104694,1.02062593370976,0.59222431662086,0.598853908179213,0.491231555574127,0.822151093200883,0.682217209848198,0.767492130642866,0.867167452538873,-0.281804960444581,-0.198362518625973,-0.165185349104694,0.141254459435974,-0.160268471820333,-0.147666899811435,-0.232830387724864,-0.165185349104694,-0.165185349104694,0.571227667862043,-0.102077234542619,-0.0151127365180308,-0.041061543704251,-0.14295400327421,-0.0555992851923934,-0.12474515936307,0.288697686236404,0.188839119141486,0.281444951327414,-0.165185349104694,0.124628268353474,0.022814228611004,0.0131125359367372,0.116632273520317,-0.165185349104694,-0.0243217232548891,0.0714427907085159,-0.0989591142117028,-0.100401634987935,-0.149215278554572,-0.281804960444581,-0.104670122256351,-0.133808259639386,-0.0822270561968399,-0.165038575475054,-0.103729641685532,-0.114656367231216,-0.138598627158558,-0.165185349104694,-0.281804960444581,-0.171878979873878,-0.281804960444581,-0.0850189329989123,-0.0840462665140891,-0.228756948243091,-0.148888116047708,-0.136495811083514,-0.232511156307879,-0.221980541782637,-0.240030875645755,-0.220196580542476,-0.281804960444581,-0.241417098968526,-0.171674860700673,-0.281804960444581,-0.193055838446841,-0.281804960444581,-0.281804960444581,-0.281804960444581,0.0524753527867071,0.0457776756074023,0.000535714861567449,-0.0661396069540787,0.0113608423306223,0.231280382208375,0.00164337711224621,-0.0851050868002416,0.142550039774082,0.311636925326344,0.234624659725006,0.141006902313936,0.230292957968779,0.338539012744639,0.44283919216884,0.384015826744336,0.340636928272381,0.177296341323714,0.072690053093777,0.145828047286903,0.313856144610852,-0.00546977052700068,0.142348187596966,-0.0443090931112411,0.118937310074304,0.133004192559403,0.0469329508649515,0.0640272522259033,0.0762256966063918,0.114973442220403,0.304530487039943,0.064062738607255,0.0893302664406818,0.133151416139279,0.0743630209857737,0.061604857754072,0.0677861822258699,0.0294944746098594,0.0814530003374633,0.00229353148150432,0.105308597749326,0.000282136592102744,0.018408861984436,0.0649854186388792,-0.0883624769975725,0.102659606216915,0.015965357450494,0.201947068453357,0.214017080954881,0.238662763397676,0.229850530115747,0.130958115854489,0.116846253092447,0.0815970868127505,-0.0944413277102611,-0.116342303726411|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=CL:0000540!1.43e-14!33;CL:0000047!1.43e-14!33;CL:0000031!1.43e-14!33;CL:0000404!1.43e-14!33;CL:0000117!2.11e-14!23;CL:0000337!2.11e-14!23;CL:0000393!2.26e-14!39;CL:0000211!2.26e-14!39;CL:0000221!2.95e-10!44;CL:0000133!2.95e-10!44;CL:0000055!4.64e-10!49;CL:0002319!9.40e-10!43|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0001017!2.77e-23!73;UBERON:0001016!4.35e-22!75;UBERON:0004121!4.90e-22!95;UBERON:0000924!4.90e-22!95;UBERON:0006601!4.90e-22!95;UBERON:0002346!1.60e-21!64;UBERON:0003075!1.60e-21!64;UBERON:0007284!1.60e-21!64;UBERON:0000073!7.15e-21!54;UBERON:0010371!1.11e-20!73;UBERON:0003056!7.22e-20!49;UBERON:0001049!1.57e-19!52;UBERON:0005068!1.57e-19!52;UBERON:0006241!1.57e-19!52;UBERON:0007135!1.57e-19!52;UBERON:0003080!8.85e-18!40;UBERON:0010314!1.04e-17!92;UBERON:0002780!3.88e-17!39;UBERON:0001890!3.88e-17!39;UBERON:0006240!3.88e-17!39;UBERON:0000955!1.16e-16!47;UBERON:0006238!1.16e-16!47;UBERON:0002616!4.08e-16!46;UBERON:0002020!1.08e-13!34;UBERON:0003528!4.73e-11!29;UBERON:0002791!4.73e-11!29;UBERON:0001893!4.73e-11!29;UBERON:0000025!1.63e-08!114;UBERON:0004111!2.16e-08!122;UBERON:0001894!2.00e-07!10;UBERON:0006222!2.00e-07!10|tfbs_overrepresentation_for_novel_motifs=0.752782,0.193418,0.722405,0.801166,0.587814,0.81763,0.919454,0.467321,0.479531,0.66329,0.870507,0.906098,1.18012,0.933025,0.608226,0,1.14208,0.578045,0.448066,0.876292,0.679146,0.756749,0.932027,0.585919,0.731217,0.963352,0.437236,0.841386,1.55113,0.380786,0.825437,1.24901,0.575271,0.411696,0.608816,0.872889,0.563758,0.902078,0.536514,1.24975,0.582863,0.831295,0.261619,0.610669,0.474221,0.788421,1.05665,3.30815,0.235354,0.646474,1.12346,0.99279,0.371606,1.3966,1.41464,0.940919,0.657156,0.891887,1.08907,0.938668,1.22795,1.00308,0.494668,1.11142,3.59989,1.15459,1.55483,1.90983,1.22303,1.7608,0.700291,0.474956,0.777706,1.44925,0.416814,1.83166,0.411601,1.04436,1.20986,0.684144,0.476502,1.16055,1.00151,0.459035,1.32978,0.535545,0.195254,0.380977,1.06194,2.07346,1.62608,1.33496,1.26245,0.595071,0.531443,0.509215,1.17262,1.26539,1.05692,0.352122,0.563856,1.24872,1.37854,1.12409,1.12297,0.830796,1.18646,0.854628,0.689894,0.681267,0.744607,1.38039,1.63982,0.876299,1.63327,0.580657,0.609576,0.805461,1.14346,0.559153,3.20551,1.08896,0.965352,1.04338,1.68841,1.21376,0.928483,1.25534,1.55328,0.598722,1.36093,0.792832,1.52297,0.955954,1.65529,0.273451,0.762499,0.832891,1.60513,2.44352,2.04137,1.55966,0.978551,1.26,4.10064,0.831808,2.40807,2.40374,0.765221,0.589976,0.38417,0.260379,1.39822,1.28513,0.954936,1.48249,0.993889,0.622823,0.749933,0.762177,1.61484,1.32889,1.21423,0.741984,1.11251,0.94678,1.38188,0.904334,0.833542|tfbs_overrepresentation_jaspar=MA0003.1;0.526413,MA0004.1;0.801718,MA0006.1;0.60285,MA0007.1;0.784593,MA0009.1;1.27673,MA0014.1;0.133574,MA0017.1;0.635031,MA0019.1;1.08369,MA0024.1;1.23079,MA0025.1;1.51835,MA0027.1;2.9431,MA0028.1;0.61552,MA0029.1;1.20789,MA0030.1;1.21482,MA0031.1;1.17722,MA0038.1;0.963265,MA0040.1;1.28983,MA0041.1;0.714279,MA0042.1;0.69885,MA0043.1;1.3775,MA0046.1;1.31428,MA0048.1;4.47146,MA0050.1;0.845669,MA0051.1;0.973068,MA0052.1;1.29825,MA0055.1;0.190475,MA0056.1;0,MA0057.1;0.337566,MA0058.1;0.690848,MA0059.1;0.705317,MA0060.1;0.502699,MA0061.1;0.5406,MA0063.1;0,MA0066.1;0.951196,MA0067.1;1.63197,MA0068.1;0.908538,MA0069.1;1.29861,MA0070.1;1.28847,MA0071.1;0.844726,MA0072.1;1.2796,MA0073.1;0.00834468,MA0074.1;0.911576,MA0076.1;0.657929,MA0077.1;1.2569,MA0078.1;1.0091,MA0081.1;2.9103,MA0083.1;1.37668,MA0084.1;1.96428,MA0087.1;1.33189,MA0088.1;0.27999,MA0089.1;0,MA0090.1;0.762482,MA0091.1;0.816659,MA0092.1;0.762845,MA0093.1;0.62555,MA0095.1;0,MA0098.1;0,MA0100.1;0.89873,MA0101.1;0.71579,MA0103.1;0.647985,MA0105.1;1.04599,MA0106.1;1.01755,MA0107.1;0.640607,MA0108.2;1.10817,MA0109.1;0,MA0111.1;0.778753,MA0113.1;0.986839,MA0114.1;0.537669,MA0115.1;1.38041,MA0116.1;1.46662,MA0117.1;1.34691,MA0119.1;0.716476,MA0122.1;1.36752,MA0124.1;1.57762,MA0125.1;1.5017,MA0130.1;0,MA0131.1;1.07881,MA0132.1;0,MA0133.1;0,MA0135.1;1.4152,MA0136.1;0.933582,MA0139.1;3.02076,MA0140.1;0.898603,MA0141.1;0.671467,MA0142.1;1.16183,MA0143.1;1.00467,MA0144.1;0.541532,MA0145.1;0.292366,MA0146.1;0.151124,MA0147.1;0.556853,MA0148.1;0.820161,MA0149.1;0.722227,MA0062.2;0.412742,MA0035.2;0.903829,MA0039.2;0.71803,MA0138.2;1.07027,MA0002.2;0.466067,MA0137.2;0.668025,MA0104.2;0.48458,MA0047.2;0.962424,MA0112.2;0.29236,MA0065.2;0.292912,MA0150.1;0.784464,MA0151.1;0,MA0152.1;0.962542,MA0153.1;1.43238,MA0154.1;0.35067,MA0155.1;0.312898,MA0156.1;0.656895,MA0157.1;1.12772,MA0158.1;0,MA0159.1;0.569393,MA0160.1;0.823568,MA0161.1;0,MA0162.1;0.964824,MA0163.1;0.157796,MA0164.1;0.933981,MA0080.2;0.64167,MA0018.2;0.944669,MA0099.2;1.06348,MA0079.2;0.0332569,MA0102.2;2.01714,MA0258.1;0.520639,MA0259.1;0.543506,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.57778613663336,-0.315657544045844,-0.315657544045844,-0.277402277802092,-0.315657544045844,-0.27072557708785,-0.285264607091465,-0.201749592921533,0.0982129906618483,0.115981845279381,-0.315657544045844,-0.304546835590316,-0.315657544045844,-0.291392559332499,-0.232413604982543,-0.262273442357099,-0.238878550338211,-0.180185396372949,-0.19561502890068,-0.175486250515101,0.198490937668422,-0.264209276749392,-0.315657544045844,-0.294172493254618,-0.285758714920221,-0.315657544045844,-0.315657544045844,-0.287409315851443,-0.315657544045844,-0.283119283986794,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.258365649746701,0.249254465581738,0.126604748723671,0.219794354380593,-0.0266884072017217,-0.258553372009741,0.0672621798837583,-0.0728921189673306,-0.114847235533987,-0.186674479602732,-0.211729718693228,-0.236697455881314,-0.273711894571188,0.133594550893428,-0.168631588954941,0.106842229951739,0.706995961533898,0.563930134756117,0.649316215953643,-0.0418296823128646,-0.131457725147052,0.35117618266268,0.428043295680482,0.243248347378755,0.048230973190965,-0.221521151922976,0.379505808365866,0.397761949338222,0.371661017164763,0.362338821931664,0.503938253963876,0.391184516821113,0.334118075690699,0.496771103078415,0.673539348245979,0.581332913707814,0.605196151329846,1.00969438788281,0.895496603489756,0.950124307405299,0.585122648460997,0.761472685646917,0.686383124049043,0.493087215899059,0.398369450530477,0.564915300253403,-0.227302068821117,-0.172696680388011,0.0260925285359661,-0.315657544045844,-0.315657544045844,-0.253178540705836,-0.243182513600424,-0.315657544045844,-0.0411486915018638,-0.190631778833951,-0.22165152255048,-0.194471322607893,0.555732593567883,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.315657544045844,-0.113640017571156,0.354690602469541,0.322021725897172,0.058047757160133,0.130657892350531,0.037950986824684,0.118782027818035,0.138116642142442,0.0321651329198453,-0.109035812050823,-0.0718438331203045,0.0709880838618123,0.0027646788893516,-0.0636681891338077,0.0424697212069857,-0.163337370632989,0.0885197830548135,0.0792067557734966,-0.216855682436903,-0.196389401345364,-0.16661995464399,-0.0111524625984473,0.662619460181964,0.423736585940511,0.45791263448486,0.396856775286121,0.311713876161548,0.604348654594012,0.481242448236804,0.15114088561973,0.107959407260352,0.444277657434606,0.0498479799134978,0.32532161689714,0.253991094796237,0.300676621449723,0.179494764734317,0.296778635724332,0.303441521938169,0.220466584034208,-0.0142812974128991,0.0391196952757937,0.274472007386581,0.228849093425894,0.133076370568853,0.193597961249401,-0.00315464476025274,0.0342000784520267,0.140321319463942,-0.315657544045844,-0.189245426799513,-0.315657544045844,0.0243295467099058,0.0528093329765587,0.0720376887241049,4.4916420357298e-05,-0.122890585568333,-0.0619103108132729,-0.0786382280934378,-0.10798873161915,-0.071929657295945,-0.105441730728796,-0.0151953962010549,-0.0883984392972159,-0.0558019761800761,-0.0804659012250736,-0.139326157063153,0.110197455636749,0.311175355475985,-0.274328088156798,-0.24772297378408,0.114795349538004,0.157312366964203,0.133879809372052,0.0522078366552464,0.102593113519866,-0.0619924489883964,-0.315657544045844,-0.0724211105751312,-0.0355348455039156,0.0176286628294497,-0.038342889195777,-0.315657544045844,-0.124782958487408,-0.170062607263405,0.118274687774101,0.189770609424128,0.451171052527719,0.213812703158902,0.229400531187274,0.204081156470356,0.331718706291947,0.315051892053302,0.276774820904953,0.144491838623867,-0.278071993347146,-0.1705723405668,-0.123018731209412,-0.23253334498513,-0.246843289714257,-0.205573212378032,-0.0622682604101307,-0.242448615382665,-0.0761161777835654,-0.155449812971242,0.285889190585926,-0.154579761990602,-0.0063274311162534,-0.256463537109352,-0.291770820374811,-0.315657544045844,0.041587971159441,0.102558815840745,0.0522018745856813,0.0353493984701281,0.162415196310174,0.133367045134262,0.225157604573892,0.180199977815436,0.0688543588611006,0.193891952658015,0.0499958982287419,0.053905642617647,0.0909281404960877,0.0121100103692502,0.372966420732436,0.390666739407907,0.213445499691898,0.106936998134908,0.531099336100959,0.465454008801621,-0.160556500592157,-0.223895085938303,-0.0130443677450054,-0.0139273229872132,0.22133442064207,0.0566625900647542,0.077688301445601,0.0820404282740113,0.108268866282218,0.17726901144206,0.224854263051465,0.624383354801502,-0.00189347175525133,0.31232052236697,0.115271213772169,0.163780820039722,0.0512230740106358,0.0637576167588597,-0.0456725435144116,-0.0132905276790818,0.0113984688120205,0.0622128784877478,3.83047091019005e-05,0.0333163290111541,-0.0617818583947664,0.0275011139308812,-0.315657544045844,-0.153622210980142,1.02563647311905,0.575784869721098,0.691301714474862,0.559866132995205,0.72714605526,0.68202729751853,0.70824746204345,0.721020517563254,-0.285140378512514,-0.185571699129627,-0.164781226697636,0.144152291175945,-0.125156293239042,-0.158252187150209,-0.176828115358407,-0.233464062809372,-0.158210035792584,0.583342910912903,-0.0279807329719417,0.0701368026805927,0.0908918581662409,-0.198106534012872,-0.0983073061013101,-0.0851060834431322,0.151418750786733,0.128671460487872,0.191220141639051,-0.16105932319775,0.186227612118014,0.148883784994359,0.112820183894375,0.0827745083896634,-0.0380417261926693,-0.0389980284009122,0.0287995007797427,-0.0869066764937425,-0.174270169568821,-0.0818128480233867,-0.315657544045844,-0.0783705262798728,-0.135252662857159,-0.0578133715150069,-0.131884019980039,-0.0577654253361379,-0.0850748572449093,-0.166630069945413,-0.174950054497061,-0.284332160858017,-0.279015550522277,-0.275904357648476,-0.149402123868635,-0.103489171174665,-0.189743650686238,-0.203205101596097,-0.192550194462508,-0.268040085638902,-0.215662199909932,-0.22599757671915,-0.244779381070573,-0.289064594897814,-0.227936195513591,-0.265649347746827,-0.315657544045844,-0.202357024879956,-0.315657544045844,-0.291767101294189,-0.293190898095181,0.0326458004216675,0.0648510967561577,0.0177691512177094,-0.143763825015242,-0.156238075016899,0.181553111194202,0.121503692581693,0.0486546016387811,0.24250202621261,0.278246475815434,0.314547486426286,0.186342154289037,0.298562808489349,0.314089409355813,0.338808618499011,0.312877620230282,0.306848432286355,0.215720099793487,0.180727367484412,0.248564304922777,0.291290852890537,0.110556170239536,0.140414955098119,0.0208684987855273,0.0918505459985091,0.137588903802568,0.137448976695158,0.101871938705059,0.127360048762088,0.154887327282616,0.21187183461466,0.120320556251842,0.108618410697668,0.193453527784617,0.104748296572209,0.0983303463156766,0.0894238450164642,0.059401461651505,0.136661131012141,0.0810869443173306,0.073736106168892,0.051832723698687,0.0302459061317129,0.0455299770881974,0.0449525267428012,0.177798141601548,0.0343037033389553,0.16215964040229,0.209836008438284,0.21930784295669,0.272668888653621,0.0837554318533015,0.104339317146915,0.121384539684661,-0.0987140809688101,-0.108637527175137
|coexpression_dpi_cluster_scores_median=0.581014471519708,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.214407010007589,-0.281804960444581,-0.182039178730527,-0.128793547173232,-0.165185349104694,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.245407483374562,-0.281804960444581,-0.201728807911463,-0.165185349104694,-0.16272659879628,-0.176557520796782,-0.165185349104694,0.191919994686943,-0.240692307349741,-0.281804960444581,-0.217349808070903,-0.19210847306771,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.184190180267429,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,0.294505284806324,0.184493360152513,0.217819222706133,-0.248979258111125,-0.281804960444581,0.239272605102135,0.0539696479675309,-0.0170063672515684,-0.281804960444581,-0.214442958230633,-0.263102058094666,-0.281804960444581,0.123636448452773,-0.168325536312855,0.0259785546828904,0.722698724513187,0.633459067913752,0.619770252638481,-0.0570934868135609,-0.22368259424007,0.118029041772981,0.413279492118261,0.218802306061851,0.249265129419093,-0.281804960444581,0.45528055335796,0.372386448939826,0.451939779655096,0.425686836748763,0.486026535574437,0.326963822998954,0.317117849409762,0.409731711956924,0.774738640549531,0.57122318080791,0.595373020912048,1.04409232895029,0.967203459342249,1.04689303847221,0.614792892458629,0.754724636636431,0.65470437818755,0.544491588878319,0.428209003450325,0.542451908230952,-0.166892285274908,-0.104056026817272,0.0333972354988468,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.0163582151793666,-0.154421316213097,-0.181508181131082,-0.150398178752701,0.558013829178703,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.281804960444581,-0.146638861848215,0.383319018497312,0.377408514871159,-0.0105614118839891,0.0413520586982212,0.0486245531929502,0.189397876534286,0.140824581217116,0.108895368918398,-0.107341026468295,-0.00869735741718597,0.160552672213251,0.01279376036514,-0.0610368919203905,0.108180327047246,-0.165185349104694,0.0548795052810943,-0.0175098261455822,-0.183003098835639,-0.188512795250163,-0.165185349104694,-0.0681939436447653,0.608827038410799,0.386581405688625,0.335337898489341,0.392004714441395,0.327638485255361,0.48005712959608,0.349545337530739,0.117335773389136,0.0769687741732888,0.375070882911437,0.100049437967928,0.285323365294431,0.236580125458235,0.26484500706117,0.142709655975871,0.313662466641647,0.314419864087093,0.216024682448252,0.0547531351762961,0.0800736407470296,0.149873106534933,0.0668226541353163,0.158090507894381,0.0966358674153487,-0.035414222271054,0.043617699559873,0.0181752359470564,-0.281804960444581,-0.182349497210177,-0.281804960444581,-0.0719208673197773,0.0551808715497744,0.0704057745591307,0.00316168783800289,-0.165185349104694,-0.0691113210999327,-0.1159472105992,-0.0834016541034758,-0.0820972972127946,-0.107547525419653,-0.0215338142161401,-0.0706421018993009,0.0242767663205622,-0.00806301759896583,-0.110493248365681,0.146705560743955,0.307175513137871,-0.281804960444581,-0.179903105051934,-0.0108902831698403,0.137432982280326,0.0526100145002419,-0.0180140739322339,0.1594859897456,-0.0251642740681557,-0.281804960444581,-0.0989716633971646,-0.0591760889755928,0.0180905586670268,0.0137226522392729,-0.281804960444581,-0.0802024724444396,-0.136210023662141,0.119137469651387,0.0900243206875507,0.547046941643487,0.20057022415654,0.156827937529162,0.200201852275794,0.28864119761013,0.315034278600457,0.244542465541992,0.136678397192148,-0.169048308348486,-0.165185349104694,-0.0872512331836561,-0.281804960444581,-0.281804960444581,-0.187971185382887,-0.0666711170987024,-0.171991567449812,-0.064705232194138,-0.0598245828450145,0.329368303978177,-0.258365649505394,-0.0417637075292336,-0.165185349104694,-0.281804960444581,-0.281804960444581,0.0751174197103689,0.084886873952257,0.007678701754293,-0.0567593488406877,0.0553449413585645,0.0874201877121726,0.220110166842357,0.130528669111098,0.0725111895178758,0.197801691865545,0.0877494965753228,0.132176760436111,0.153856259373198,-0.0548320006657031,0.438589503342853,0.336643553428601,0.132253105918536,0.185293415607428,0.482858093542618,0.372982687769613,-0.15864943699096,-0.104285239781996,0.00745494921429785,-0.0311709162525117,0.186366634172546,0.059763569090765,0.114828599113043,0.143166080256929,0.2366466218794,0.10935593689544,0.246047400428028,0.458439144933017,0.0178288375620424,0.282977537696911,0.0805070192856325,0.168219775784268,0.0850756576118993,-0.109914391361559,-0.0764254211015877,-0.0901477671289603,0.0363766626681426,0.0429522970408863,-0.0325369063382198,0.038466232496309,-0.0327663903392945,0.0475543683145523,-0.281804960444581,-0.165185349104694,1.02062593370976,0.59222431662086,0.598853908179213,0.491231555574127,0.822151093200883,0.682217209848198,0.767492130642866,0.867167452538873,-0.281804960444581,-0.198362518625973,-0.165185349104694,0.141254459435974,-0.160268471820333,-0.147666899811435,-0.232830387724864,-0.165185349104694,-0.165185349104694,0.571227667862043,-0.102077234542619,-0.0151127365180308,-0.041061543704251,-0.14295400327421,-0.0555992851923934,-0.12474515936307,0.288697686236404,0.188839119141486,0.281444951327414,-0.165185349104694,0.124628268353474,0.022814228611004,0.0131125359367372,0.116632273520317,-0.165185349104694,-0.0243217232548891,0.0714427907085159,-0.0989591142117028,-0.100401634987935,-0.149215278554572,-0.281804960444581,-0.104670122256351,-0.133808259639386,-0.0822270561968399,-0.165038575475054,-0.103729641685532,-0.114656367231216,-0.138598627158558,-0.165185349104694,-0.281804960444581,-0.171878979873878,-0.281804960444581,-0.0850189329989123,-0.0840462665140891,-0.228756948243091,-0.148888116047708,-0.136495811083514,-0.232511156307879,-0.221980541782637,-0.240030875645755,-0.220196580542476,-0.281804960444581,-0.241417098968526,-0.171674860700673,-0.281804960444581,-0.193055838446841,-0.281804960444581,-0.281804960444581,-0.281804960444581,0.0524753527867071,0.0457776756074023,0.000535714861567449,-0.0661396069540787,0.0113608423306223,0.231280382208375,0.00164337711224621,-0.0851050868002416,0.142550039774082,0.311636925326344,0.234624659725006,0.141006902313936,0.230292957968779,0.338539012744639,0.44283919216884,0.384015826744336,0.340636928272381,0.177296341323714,0.072690053093777,0.145828047286903,0.313856144610852,-0.00546977052700068,0.142348187596966,-0.0443090931112411,0.118937310074304,0.133004192559403,0.0469329508649515,0.0640272522259033,0.0762256966063918,0.114973442220403,0.304530487039943,0.064062738607255,0.0893302664406818,0.133151416139279,0.0743630209857737,0.061604857754072,0.0677861822258699,0.0294944746098594,0.0814530003374633,0.00229353148150432,0.105308597749326,0.000282136592102744,0.018408861984436,0.0649854186388792,-0.0883624769975725,0.102659606216915,0.015965357450494,0.201947068453357,0.214017080954881,0.238662763397676,0.229850530115747,0.130958115854489,0.116846253092447,0.0815970868127505,-0.0944413277102611,-0.116342303726411
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=CL:0000540!1.43e-14!33;CL:0000047!1.43e-14!33;CL:0000031!1.43e-14!33;CL:0000404!1.43e-14!33;CL:0000117!2.11e-14!23;CL:0000337!2.11e-14!23;CL:0000393!2.26e-14!39;CL:0000211!2.26e-14!39;CL:0000221!2.95e-10!44;CL:0000133!2.95e-10!44;CL:0000055!4.64e-10!49;CL:0002319!9.40e-10!43
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001017!2.77e-23!73;UBERON:0001016!4.35e-22!75;UBERON:0004121!4.90e-22!95;UBERON:0000924!4.90e-22!95;UBERON:0006601!4.90e-22!95;UBERON:0002346!1.60e-21!64;UBERON:0003075!1.60e-21!64;UBERON:0007284!1.60e-21!64;UBERON:0000073!7.15e-21!54;UBERON:0010371!1.11e-20!73;UBERON:0003056!7.22e-20!49;UBERON:0001049!1.57e-19!52;UBERON:0005068!1.57e-19!52;UBERON:0006241!1.57e-19!52;UBERON:0007135!1.57e-19!52;UBERON:0003080!8.85e-18!40;UBERON:0010314!1.04e-17!92;UBERON:0002780!3.88e-17!39;UBERON:0001890!3.88e-17!39;UBERON:0006240!3.88e-17!39;UBERON:0000955!1.16e-16!47;UBERON:0006238!1.16e-16!47;UBERON:0002616!4.08e-16!46;UBERON:0002020!1.08e-13!34;UBERON:0003528!4.73e-11!29;UBERON:0002791!4.73e-11!29;UBERON:0001893!4.73e-11!29;UBERON:0000025!1.63e-08!114;UBERON:0004111!2.16e-08!122;UBERON:0001894!2.00e-07!10;UBERON:0006222!2.00e-07!10
|tfbs_overrepresentation_for_novel_motifs=0.752782,0.193418,0.722405,0.801166,0.587814,0.81763,0.919454,0.467321,0.479531,0.66329,0.870507,0.906098,1.18012,0.933025,0.608226,0,1.14208,0.578045,0.448066,0.876292,0.679146,0.756749,0.932027,0.585919,0.731217,0.963352,0.437236,0.841386,1.55113,0.380786,0.825437,1.24901,0.575271,0.411696,0.608816,0.872889,0.563758,0.902078,0.536514,1.24975,0.582863,0.831295,0.261619,0.610669,0.474221,0.788421,1.05665,3.30815,0.235354,0.646474,1.12346,0.99279,0.371606,1.3966,1.41464,0.940919,0.657156,0.891887,1.08907,0.938668,1.22795,1.00308,0.494668,1.11142,3.59989,1.15459,1.55483,1.90983,1.22303,1.7608,0.700291,0.474956,0.777706,1.44925,0.416814,1.83166,0.411601,1.04436,1.20986,0.684144,0.476502,1.16055,1.00151,0.459035,1.32978,0.535545,0.195254,0.380977,1.06194,2.07346,1.62608,1.33496,1.26245,0.595071,0.531443,0.509215,1.17262,1.26539,1.05692,0.352122,0.563856,1.24872,1.37854,1.12409,1.12297,0.830796,1.18646,0.854628,0.689894,0.681267,0.744607,1.38039,1.63982,0.876299,1.63327,0.580657,0.609576,0.805461,1.14346,0.559153,3.20551,1.08896,0.965352,1.04338,1.68841,1.21376,0.928483,1.25534,1.55328,0.598722,1.36093,0.792832,1.52297,0.955954,1.65529,0.273451,0.762499,0.832891,1.60513,2.44352,2.04137,1.55966,0.978551,1.26,4.10064,0.831808,2.40807,2.40374,0.765221,0.589976,0.38417,0.260379,1.39822,1.28513,0.954936,1.48249,0.993889,0.622823,0.749933,0.762177,1.61484,1.32889,1.21423,0.741984,1.11251,0.94678,1.38188,0.904334,0.833542
|tfbs_overrepresentation_jaspar=MA0003.1;0.526413,MA0004.1;0.801718,MA0006.1;0.60285,MA0007.1;0.784593,MA0009.1;1.27673,MA0014.1;0.133574,MA0017.1;0.635031,MA0019.1;1.08369,MA0024.1;1.23079,MA0025.1;1.51835,MA0027.1;2.9431,MA0028.1;0.61552,MA0029.1;1.20789,MA0030.1;1.21482,MA0031.1;1.17722,MA0038.1;0.963265,MA0040.1;1.28983,MA0041.1;0.714279,MA0042.1;0.69885,MA0043.1;1.3775,MA0046.1;1.31428,MA0048.1;4.47146,MA0050.1;0.845669,MA0051.1;0.973068,MA0052.1;1.29825,MA0055.1;0.190475,MA0056.1;0,MA0057.1;0.337566,MA0058.1;0.690848,MA0059.1;0.705317,MA0060.1;0.502699,MA0061.1;0.5406,MA0063.1;0,MA0066.1;0.951196,MA0067.1;1.63197,MA0068.1;0.908538,MA0069.1;1.29861,MA0070.1;1.28847,MA0071.1;0.844726,MA0072.1;1.2796,MA0073.1;0.00834468,MA0074.1;0.911576,MA0076.1;0.657929,MA0077.1;1.2569,MA0078.1;1.0091,MA0081.1;2.9103,MA0083.1;1.37668,MA0084.1;1.96428,MA0087.1;1.33189,MA0088.1;0.27999,MA0089.1;0,MA0090.1;0.762482,MA0091.1;0.816659,MA0092.1;0.762845,MA0093.1;0.62555,MA0095.1;0,MA0098.1;0,MA0100.1;0.89873,MA0101.1;0.71579,MA0103.1;0.647985,MA0105.1;1.04599,MA0106.1;1.01755,MA0107.1;0.640607,MA0108.2;1.10817,MA0109.1;0,MA0111.1;0.778753,MA0113.1;0.986839,MA0114.1;0.537669,MA0115.1;1.38041,MA0116.1;1.46662,MA0117.1;1.34691,MA0119.1;0.716476,MA0122.1;1.36752,MA0124.1;1.57762,MA0125.1;1.5017,MA0130.1;0,MA0131.1;1.07881,MA0132.1;0,MA0133.1;0,MA0135.1;1.4152,MA0136.1;0.933582,MA0139.1;3.02076,MA0140.1;0.898603,MA0141.1;0.671467,MA0142.1;1.16183,MA0143.1;1.00467,MA0144.1;0.541532,MA0145.1;0.292366,MA0146.1;0.151124,MA0147.1;0.556853,MA0148.1;0.820161,MA0149.1;0.722227,MA0062.2;0.412742,MA0035.2;0.903829,MA0039.2;0.71803,MA0138.2;1.07027,MA0002.2;0.466067,MA0137.2;0.668025,MA0104.2;0.48458,MA0047.2;0.962424,MA0112.2;0.29236,MA0065.2;0.292912,MA0150.1;0.784464,MA0151.1;0,MA0152.1;0.962542,MA0153.1;1.43238,MA0154.1;0.35067,MA0155.1;0.312898,MA0156.1;0.656895,MA0157.1;1.12772,MA0158.1;0,MA0159.1;0.569393,MA0160.1;0.823568,MA0161.1;0,MA0162.1;0.964824,MA0163.1;0.157796,MA0164.1;0.933981,MA0080.2;0.64167,MA0018.2;0.944669,MA0099.2;1.06348,MA0079.2;0.0332569,MA0102.2;2.01714,MA0258.1;0.520639,MA0259.1;0.543506,MA0442.1;0
}}

Latest revision as of 20:37, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chrX:99266527..99266543,-p1@Rgag4
Mm9::chrX:99266639..99266661,-p2@Rgag4
Mm9::chrX:99266664..99266680,-p3@Rgag4


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
central nervous system2.77e-2373
nervous system4.35e-2275
ectoderm-derived structure4.90e-2295
ectoderm4.90e-2295
presumptive ectoderm4.90e-2295
neurectoderm1.60e-2164
neural plate1.60e-2164
presumptive neural plate1.60e-2164
regional part of nervous system7.15e-2154
ecto-epithelium1.11e-2073
pre-chordal neural plate7.22e-2049
neural tube1.57e-1952
neural rod1.57e-1952
future spinal cord1.57e-1952
neural keel1.57e-1952
anterior neural tube8.85e-1840
structure with developmental contribution from neural crest1.04e-1792
regional part of forebrain3.88e-1739
forebrain3.88e-1739
future forebrain3.88e-1739
brain1.16e-1647
future brain1.16e-1647
regional part of brain4.08e-1646
gray matter1.08e-1334
brain grey matter4.73e-1129
regional part of telencephalon4.73e-1129
telencephalon4.73e-1129
tube1.63e-08114
anatomical conduit2.16e-08122
diencephalon2.00e-0710
future diencephalon2.00e-0710


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10.526413
MA0004.10.801718
MA0006.10.60285
MA0007.10.784593
MA0009.11.27673
MA0014.10.133574
MA0017.10.635031
MA0019.11.08369
MA0024.11.23079
MA0025.11.51835
MA0027.12.9431
MA0028.10.61552
MA0029.11.20789
MA0030.11.21482
MA0031.11.17722
MA0038.10.963265
MA0040.11.28983
MA0041.10.714279
MA0042.10.69885
MA0043.11.3775
MA0046.11.31428
MA0048.14.47146
MA0050.10.845669
MA0051.10.973068
MA0052.11.29825
MA0055.10.190475
MA0056.10
MA0057.10.337566
MA0058.10.690848
MA0059.10.705317
MA0060.10.502699
MA0061.10.5406
MA0063.10
MA0066.10.951196
MA0067.11.63197
MA0068.10.908538
MA0069.11.29861
MA0070.11.28847
MA0071.10.844726
MA0072.11.2796
MA0073.10.00834468
MA0074.10.911576
MA0076.10.657929
MA0077.11.2569
MA0078.11.0091
MA0081.12.9103
MA0083.11.37668
MA0084.11.96428
MA0087.11.33189
MA0088.10.27999
MA0089.10
MA0090.10.762482
MA0091.10.816659
MA0092.10.762845
MA0093.10.62555
MA0095.10
MA0098.10
MA0100.10.89873
MA0101.10.71579
MA0103.10.647985
MA0105.11.04599
MA0106.11.01755
MA0107.10.640607
MA0108.21.10817
MA0109.10
MA0111.10.778753
MA0113.10.986839
MA0114.10.537669
MA0115.11.38041
MA0116.11.46662
MA0117.11.34691
MA0119.10.716476
MA0122.11.36752
MA0124.11.57762
MA0125.11.5017
MA0130.10
MA0131.11.07881
MA0132.10
MA0133.10
MA0135.11.4152
MA0136.10.933582
MA0139.13.02076
MA0140.10.898603
MA0141.10.671467
MA0142.11.16183
MA0143.11.00467
MA0144.10.541532
MA0145.10.292366
MA0146.10.151124
MA0147.10.556853
MA0148.10.820161
MA0149.10.722227
MA0062.20.412742
MA0035.20.903829
MA0039.20.71803
MA0138.21.07027
MA0002.20.466067
MA0137.20.668025
MA0104.20.48458
MA0047.20.962424
MA0112.20.29236
MA0065.20.292912
MA0150.10.784464
MA0151.10
MA0152.10.962542
MA0153.11.43238
MA0154.10.35067
MA0155.10.312898
MA0156.10.656895
MA0157.11.12772
MA0158.10
MA0159.10.569393
MA0160.10.823568
MA0161.10
MA0162.10.964824
MA0163.10.157796
MA0164.10.933981
MA0080.20.64167
MA0018.20.944669
MA0099.21.06348
MA0079.20.0332569
MA0102.22.01714
MA0258.10.520639
MA0259.10.543506
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:3768&oldid=3075767"