FFCP PHASE1:Hg19::chr6:139349817..139349899,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:139349817..139349899,+
|short_description=p1@C6orf115
|description=CAGE_peak_1_at_C6orf115_5end
|association_with_transcript=0bp_to_ENST00000367660,NM_0212...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58527 | |EntrezGene=58527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21230 | |HGNC=21230 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P1F3 | |UniProt=Q9P1F3 | ||
|association_with_transcript=0bp_to_ENST00000367660,NM_021243,uc003qil.2,uc003qim.2_5end | |||
|cluster_id=chr6:139349817..139349899,+ | |||
|description=CAGE_peak_1_at_C6orf115_5end | |||
|id=chr6:139349817..139349899,+ | |||
|ontology_enrichment_celltype=CL:0000144!3.16e-31!625;CL:0000012!2.12e-30!682;CL:0000548!4.47e-29!679;CL:0000004!4.47e-29!679;CL:0000255!4.47e-29!679;CL:0000003!2.66e-27!722;CL:0002371!3.50e-25!591;CL:0000063!6.12e-16!578;CL:0002057!2.00e-14!42;CL:0002194!8.16e-13!63;CL:0000576!8.16e-13!63;CL:0000040!8.16e-13!63;CL:0000559!8.16e-13!63;CL:0002009!2.06e-12!65;CL:0002321!4.87e-12!248;CL:0000860!1.63e-11!45;CL:0000220!2.28e-11!246;CL:0000557!2.32e-11!71;CL:0000839!2.66e-11!70;CL:0000988!2.05e-10!182;CL:0000763!1.14e-09!112;CL:0000049!1.14e-09!112;CL:0002087!1.23e-09!119;CL:0000034!1.50e-09!444;CL:0000037!1.71e-09!172;CL:0000566!1.71e-09!172;CL:0002031!1.91e-09!124;CL:0000766!2.79e-09!76;CL:0002032!5.43e-09!165;CL:0000837!5.43e-09!165;CL:1000449!3.03e-08!16;CL:0000738!3.28e-08!140;CL:0000723!9.19e-08!436;CL:0000066!1.05e-07!254;CL:0000048!1.58e-07!430;CL:0000222!3.23e-07!119;CL:1000507!5.81e-07!12;CL:1000494!5.81e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.22e-12;33!CL:0002057;9.22e-12;33!CL:0000473;2.58e-11;39!CL:0000234;2.58e-11;39!CL:0000576;2.47e-10;48!CL:1000449;6.44e-09;15!CL:0002681;2.70e-07;12!CL:0002584;2.70e-07;12!CL:1000507;4.25e-07;10!CL:1000494;4.25e-07;10!CL:1000497;4.52e-07;17!CL:0002518;4.52e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.21e-16,48;CL:0000234,3.21e-16,48;CL:0002194,3.58e-16,59;CL:0000576,3.58e-16,59;CL:0000040,3.58e-16,59;CL:0000559,3.58e-16,59;CL:0002009,1.24e-15,61;CL:0000860,2.00e-14,42;CL:0002057,2.00e-14,42;CL:0000557,3.13e-14,67;CL:0000839,3.45e-14,66;CL:0002321,2.84e-12,250;CL:0000766,1.08e-11,72;CL:0000763,1.25e-11,108;CL:0000049,1.25e-11,108;CL:0000988,1.25e-11,177;CL:0002087,1.57e-11,115;CL:0002031,2.85e-11,120;CL:0000037,4.95e-11,168;CL:0002032,1.64e-10,161;CL:0000837,1.64e-10,161;CL:0000034,5.44e-10,441;CL:0000738,8.94e-10,136;CL:1000449,6.40e-09,15;CL:0000723,3.71e-08,433;CL:0000048,6.46e-08,427;CL:0000066,8.72e-08,253;CL:0000222,2.04e-07,121;CL:0002681,2.65e-07,12;CL:0002584,2.65e-07,12;CL:1000497,4.27e-07,17;CL:0002518,4.27e-07,17;CL:1000507,4.35e-07,10;CL:1000494,4.35e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;7.83e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.81e-12!216;UBERON:0002371!4.79e-12!80;UBERON:0001474!5.45e-11!86;UBERON:0002204!1.24e-10!167;UBERON:0004765!6.10e-10!101;UBERON:0001434!6.10e-10!101;UBERON:0002193!1.52e-09!112;UBERON:0002390!1.52e-09!102;UBERON:0003061!1.52e-09!102;UBERON:0004211!3.03e-08!16;UBERON:0001285!3.03e-08!16;UBERON:0007684!3.03e-08!16;UBERON:0003220!3.03e-08!16;UBERON:0004208!3.03e-08!16;UBERON:0006555!3.43e-08!17;UBERON:0005103!3.43e-08!17;UBERON:0000083!3.43e-08!17;UBERON:0009201!3.43e-08!17;UBERON:0004819!3.43e-08!17;UBERON:0006553!3.43e-08!17;UBERON:0003074!3.43e-08!17;UBERON:0003060!3.43e-08!17;UBERON:0002405!3.52e-07!115;UBERON:0000080!3.73e-07!18;UBERON:0002120!3.73e-07!18;UBERON:0004875!3.73e-07!18;UBERON:0005721!3.73e-07!18;UBERON:0005754!3.73e-07!18;UBERON:0007297!3.73e-07!18;UBERON:0009773!5.81e-07!12;UBERON:0001231!5.81e-07!12;UBERON:0004810!5.81e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.44e-09;15!UBERON:0004819;6.44e-09;15!UBERON:0001285;6.44e-09;15!UBERON:0007684;6.44e-09;15!UBERON:0001225;2.70e-07;12!UBERON:0008987;2.70e-07;12!UBERON:0004211;4.25e-07;10!UBERON:0009773;4.25e-07;10!UBERON:0001231;4.25e-07;10!UBERON:0004810;4.25e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.24e-15,76;UBERON:0002405,5.86e-14,93;UBERON:0004765,5.92e-14,90;UBERON:0001474,1.76e-13,82;UBERON:0002204,9.45e-12,167;UBERON:0002390,1.34e-11,98;UBERON:0003061,1.34e-11,98;UBERON:0002193,1.71e-11,108;UBERON:0001434,1.81e-11,100;UBERON:0003081,4.34e-11,203;UBERON:0000926,4.84e-10,315;UBERON:0004120,4.84e-10,315;UBERON:0006603,4.84e-10,315;UBERON:0004211,6.40e-09,15;UBERON:0009773,6.40e-09,15;UBERON:0001231,6.40e-09,15;UBERON:0001285,6.40e-09,15;UBERON:0007684,6.40e-09,15;UBERON:0004208,6.40e-09,15;UBERON:0006555,7.94e-09,16;UBERON:0004819,7.94e-09,16;UBERON:0001225,2.65e-07,12;UBERON:0008987,2.65e-07,12;UBERON:0004810,4.35e-07,10 | |||
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| ||
|short_description=p1@C6orf115 | |||
}} | }} |
Latest revision as of 05:41, 25 September 2015
Short description: | p1@C6orf115 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C6orf115_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367660, NM_021243, uc003qil.2, uc003qim.2_5end |
EntrezGene: | C6orf115 |
HGNC: | 21230 |
UniProt: | Q9P1F3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.24e-15 | 76 |
immune system | 5.86e-14 | 93 |
skeletal element | 5.92e-14 | 90 |
bone element | 1.76e-13 | 82 |
musculoskeletal system | 9.45e-12 | 167 |
hematopoietic system | 1.34e-11 | 98 |
blood island | 1.34e-11 | 98 |
hemolymphoid system | 1.71e-11 | 108 |
skeletal system | 1.81e-11 | 100 |
lateral plate mesoderm | 4.34e-11 | 203 |
mesoderm | 4.84e-10 | 315 |
mesoderm-derived structure | 4.84e-10 | 315 |
presumptive mesoderm | 4.84e-10 | 315 |
nephron epithelium | 6.40e-09 | 15 |
renal tubule | 6.40e-09 | 15 |
nephron tubule | 6.40e-09 | 15 |
nephron | 6.40e-09 | 15 |
uriniferous tubule | 6.40e-09 | 15 |
nephrogenic mesenchyme | 6.40e-09 | 15 |
excretory tube | 7.94e-09 | 16 |
kidney epithelium | 7.94e-09 | 16 |
cortex of kidney | 2.65e-07 | 12 |
renal parenchyma | 2.65e-07 | 12 |
nephron tubule epithelium | 4.35e-07 | 10 |