FFCP PHASE1:Hg19::chr7:130794729..130794807,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:130794729..130794807,-
|short_description=p3@FLJ43663
|description=CAGE_peak_3_at_FLJ43663_5end
|association_with_transcript=-76bp_to_uc003vqq.2_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=378805 | |EntrezGene=378805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-76bp_to_uc003vqq.2_5end | |||
|cluster_id=chr7:130794729..130794807,- | |||
|description=CAGE_peak_3_at_FLJ43663_5end | |||
|id=chr7:130794729..130794807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.78e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.57e-32!115;UBERON:0001049!4.65e-18!57;UBERON:0005068!4.65e-18!57;UBERON:0006241!4.65e-18!57;UBERON:0007135!4.65e-18!57;UBERON:0002616!7.60e-16!59;UBERON:0003080!4.74e-15!42;UBERON:0002780!1.61e-14!41;UBERON:0001890!1.61e-14!41;UBERON:0006240!1.61e-14!41;UBERON:0000955!1.54e-13!69;UBERON:0006238!1.54e-13!69;UBERON:0001017!3.04e-13!82;UBERON:0000073!4.03e-13!94;UBERON:0001016!4.03e-13!94;UBERON:0005743!1.71e-12!86;UBERON:0002020!2.68e-11!34;UBERON:0003528!2.68e-11!34;UBERON:0001893!5.77e-11!34;UBERON:0003075!9.81e-11!86;UBERON:0007284!9.81e-11!86;UBERON:0002791!1.88e-10!33;UBERON:0001869!3.48e-10!32;UBERON:0002346!5.00e-10!90;UBERON:0000033!2.84e-09!123;UBERON:0000062!3.11e-09!511;UBERON:0000153!8.72e-09!129;UBERON:0007811!8.72e-09!129;UBERON:0004111!1.05e-08!241;UBERON:0003056!1.65e-08!61;UBERON:0002619!1.01e-07!22;UBERON:0000480!1.40e-07!626;UBERON:0000477!1.60e-07!286;UBERON:0000467!1.87e-07!625;UBERON:0000468!2.23e-07!659;UBERON:0001950!7.77e-07!20;UBERON:0000956!8.18e-07!25;UBERON:0000203!8.18e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.96e-12;41!UBERON:0001890;9.96e-12;41!UBERON:0000073;5.43e-11;53!UBERON:0002616;5.43e-11;53!UBERON:0001893;1.37e-10;34!UBERON:0003528;1.42e-10;34!UBERON:0002020;1.42e-10;34!UBERON:0002791;3.90e-10;32!UBERON:0001869;4.06e-10;32!UBERON:0007023;1.60e-09;114!UBERON:0002619;1.85e-08;22!UBERON:0000955;1.38e-07;68!UBERON:0001017;1.43e-07;75!UBERON:0000956;1.78e-07;25!UBERON:0000203;1.78e-07;25!UBERON:0001950;1.91e-07;20!UBERON:0000125;4.11e-07;9!UBERON:0002308;4.11e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.32e-33,114;UBERON:0001049,1.94e-19,56;UBERON:0005068,1.94e-19,56;UBERON:0006241,1.94e-19,56;UBERON:0007135,1.94e-19,56;UBERON:0000073,2.65e-18,53;UBERON:0002616,2.65e-18,53;UBERON:0002780,8.73e-16,41;UBERON:0001890,8.73e-16,41;UBERON:0003080,8.73e-16,41;UBERON:0006240,8.73e-16,41;UBERON:0001016,6.86e-15,89;UBERON:0000955,9.55e-15,68;UBERON:0006238,9.55e-15,68;UBERON:0001017,1.37e-14,81;UBERON:0003075,1.59e-12,82;UBERON:0007284,1.59e-12,82;UBERON:0003528,2.92e-12,34;UBERON:0002020,2.92e-12,34;UBERON:0001893,6.76e-12,34;UBERON:0002346,1.08e-11,86;UBERON:0002791,4.67e-11,32;UBERON:0001869,4.83e-11,32;UBERON:0010314,1.43e-08,132;UBERON:0003056,1.53e-08,61;UBERON:0002619,1.61e-08,22;UBERON:0011216,5.53e-08,223;UBERON:0004111,9.66e-08,240;UBERON:0010371,1.41e-07,104;UBERON:0001950,1.51e-07,20;UBERON:0000956,2.35e-07,25;UBERON:0000203,2.35e-07,25;UBERON:0000125,5.01e-07,9;UBERON:0002308,5.01e-07,9 | |||
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| ||
|short_description=p3@FLJ43663 | |||
}} | }} |
Latest revision as of 09:41, 16 September 2015
Short description: | p3@FLJ43663 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FLJ43663_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_uc003vqq.2_5end |
EntrezGene: | FLJ43663 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.32e-33 | 114 |
neural tube | 1.94e-19 | 56 |
neural rod | 1.94e-19 | 56 |
future spinal cord | 1.94e-19 | 56 |
neural keel | 1.94e-19 | 56 |
regional part of nervous system | 2.65e-18 | 53 |
regional part of brain | 2.65e-18 | 53 |
regional part of forebrain | 8.73e-16 | 41 |
forebrain | 8.73e-16 | 41 |
anterior neural tube | 8.73e-16 | 41 |
future forebrain | 8.73e-16 | 41 |
nervous system | 6.86e-15 | 89 |
brain | 9.55e-15 | 68 |
future brain | 9.55e-15 | 68 |
central nervous system | 1.37e-14 | 81 |
neural plate | 1.59e-12 | 82 |
presumptive neural plate | 1.59e-12 | 82 |
brain grey matter | 2.92e-12 | 34 |
gray matter | 2.92e-12 | 34 |
telencephalon | 6.76e-12 | 34 |
neurectoderm | 1.08e-11 | 86 |
regional part of telencephalon | 4.67e-11 | 32 |
cerebral hemisphere | 4.83e-11 | 32 |
structure with developmental contribution from neural crest | 1.43e-08 | 132 |
pre-chordal neural plate | 1.53e-08 | 61 |
regional part of cerebral cortex | 1.61e-08 | 22 |
organ system subdivision | 5.53e-08 | 223 |
anatomical conduit | 9.66e-08 | 240 |
ecto-epithelium | 1.41e-07 | 104 |
neocortex | 1.51e-07 | 20 |
cerebral cortex | 2.35e-07 | 25 |
pallium | 2.35e-07 | 25 |
neural nucleus | 5.01e-07 | 9 |
nucleus of brain | 5.01e-07 | 9 |