FFCP PHASE1:Hg19::chr10:97050816..97050825,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2067 | |||
|TSSclassifier=strong | |||
|UniProt=O00151 | |||
|association_with_transcript=-35bp_to_ENST00000329399,NM_020992,uc001kkh.2,uc001kki.2,uc001kkj.1,uc009xuv.2_5end | |||
|cluster_id=chr10:97050816..97050825,- | |||
|coexpression_cluster_id=C2083 | |||
|description=CAGE_peak_4_at_PDLIM1_5end | |||
|id=chr10:97050816..97050825,- | |||
|ontology_enrichment_celltype=CL:0002321!2.86e-22!248;CL:0000220!1.04e-21!246;CL:0000066!1.22e-21!254;CL:0000222!1.49e-15!119;CL:0000548!1.50e-13!679;CL:0000004!1.50e-13!679;CL:0000255!1.50e-13!679;CL:0000012!2.63e-13!682;CL:0000076!4.15e-13!62;CL:0000213!2.12e-11!57;CL:0000215!2.12e-11!57;CL:0002139!3.09e-11!24;CL:0000115!3.37e-11!35;CL:0002078!5.61e-11!44;CL:0000144!2.20e-10!625;CL:0000071!2.49e-09!18;CL:0002546!2.49e-09!18;CL:0002371!8.86e-09!591;CL:0000055!1.28e-08!180;CL:1000497!2.58e-08!18;CL:0002518!2.58e-08!18;CL:1000449!9.37e-08!16;CL:0000057!2.38e-07!75;CL:0000183!3.05e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.08e-11;24!CL:0000115;3.71e-10;36!CL:0000071;2.11e-09;18!CL:1000497;5.42e-08;17!CL:0002518;5.42e-08;17!CL:0002078;1.23e-07;45!CL:0000213;1.46e-07;58!CL:0000215;1.46e-07;58!CL:1000449;2.03e-07;15!CL:0000076;4.50e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.34e-23,250;CL:0000066,2.42e-21,253;CL:0000222,3.01e-16,121;CL:0000076,1.69e-13,63;CL:0000115,3.82e-12,36;CL:0000213,4.57e-12,58;CL:0000215,4.57e-12,58;CL:0002078,1.15e-11,45;CL:0002139,2.17e-11,24;CL:0000071,1.88e-09,18;CL:0002546,1.88e-09,18;CL:1000497,5.09e-08,17;CL:0002518,5.09e-08,17;CL:0000057,1.87e-07,76;CL:1000449,1.89e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.11e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.13e-17!118;UBERON:0002049!1.20e-16!79;UBERON:0007798!1.20e-16!79;UBERON:0004872!1.46e-14!84;UBERON:0001009!3.48e-14!113;UBERON:0000055!4.27e-14!69;UBERON:0004535!1.05e-13!110;UBERON:0003104!1.37e-12!238;UBERON:0009142!1.37e-12!238;UBERON:0003102!4.15e-12!95;UBERON:0005256!9.06e-12!143;UBERON:0001981!4.34e-11!60;UBERON:0007500!4.34e-11!60;UBERON:0004537!4.34e-11!60;UBERON:0006965!4.34e-11!60;UBERON:0000490!5.57e-11!138;UBERON:0002100!9.01e-11!216;UBERON:0000477!3.42e-10!286;UBERON:0004119!2.35e-09!169;UBERON:0000925!2.35e-09!169;UBERON:0006595!2.35e-09!169;UBERON:0001986!2.49e-09!18;UBERON:0004638!2.49e-09!18;UBERON:0004852!2.49e-09!18;UBERON:0000487!3.37e-09!22;UBERON:0006914!4.35e-08!25;UBERON:0003103!5.06e-08!69;UBERON:0000481!6.83e-08!347;UBERON:0004211!9.37e-08!16;UBERON:0001285!9.37e-08!16;UBERON:0007684!9.37e-08!16;UBERON:0003220!9.37e-08!16;UBERON:0004208!9.37e-08!16;UBERON:0000119!9.57e-08!312;UBERON:0004111!9.58e-08!241;UBERON:0009569!1.04e-07!113;UBERON:0003064!1.37e-07!37;UBERON:0006555!1.72e-07!17;UBERON:0005103!1.72e-07!17;UBERON:0000083!1.72e-07!17;UBERON:0009201!1.72e-07!17;UBERON:0004819!1.72e-07!17;UBERON:0006553!1.72e-07!17;UBERON:0003074!1.72e-07!17;UBERON:0003060!1.72e-07!17;UBERON:0001008!1.73e-07!45;UBERON:0003887!2.00e-07!21;UBERON:0001007!2.16e-07!155;UBERON:0001555!2.16e-07!155;UBERON:0007026!2.16e-07!155;UBERON:0000353!2.90e-07!17;UBERON:0000483!3.17e-07!309;UBERON:0006554!3.36e-07!44;UBERON:0000080!4.85e-07!18;UBERON:0002120!4.85e-07!18;UBERON:0004875!4.85e-07!18;UBERON:0005721!4.85e-07!18;UBERON:0005754!4.85e-07!18;UBERON:0007297!4.85e-07!18;UBERON:0000475!6.30e-07!365;UBERON:0004876!6.42e-07!20;UBERON:0001637!9.19e-07!42;UBERON:0003509!9.19e-07!42;UBERON:0004572!9.19e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.11e-09;18!UBERON:0001986;2.11e-09;18!UBERON:0004852;2.11e-09;18!UBERON:0000490;2.83e-09;33!UBERON:0000487;3.42e-09;22!UBERON:0003914;4.21e-08;74!UBERON:0006914;4.75e-08;25!UBERON:0002049;7.17e-08;75!UBERON:0007798;7.17e-08;75!UBERON:0006555;2.03e-07;15!UBERON:0004819;2.03e-07;15!UBERON:0001285;2.03e-07;15!UBERON:0007684;2.03e-07;15!UBERON:0000055;3.94e-07;65!UBERON:0007500;5.66e-07;56!UBERON:0001981;5.66e-07;56!UBERON:0004537;5.66e-07;56!UBERON:0000353;6.91e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.55e-17,117;UBERON:0002049,1.14e-16,78;UBERON:0007798,1.14e-16,78;UBERON:0004872,2.19e-14,83;UBERON:0000055,4.41e-14,68;UBERON:0001009,6.13e-14,112;UBERON:0004535,1.86e-13,109;UBERON:0000490,6.56e-13,148;UBERON:0003102,1.91e-12,99;UBERON:0004119,2.58e-11,160;UBERON:0000925,2.58e-11,160;UBERON:0006595,2.58e-11,160;UBERON:0007500,4.92e-11,59;UBERON:0001981,4.92e-11,59;UBERON:0004537,4.92e-11,59;UBERON:0006965,4.92e-11,59;UBERON:0002100,2.43e-10,199;UBERON:0003104,7.23e-10,160;UBERON:0009142,7.23e-10,160;UBERON:0004638,1.88e-09,18;UBERON:0001986,1.88e-09,18;UBERON:0004852,1.88e-09,18;UBERON:0000487,2.55e-09,22;UBERON:0005256,5.54e-09,122;UBERON:0001007,6.84e-09,145;UBERON:0001555,6.84e-09,145;UBERON:0007026,6.84e-09,145;UBERON:0001008,2.69e-08,48;UBERON:0006914,3.43e-08,25;UBERON:0001048,5.14e-08,160;UBERON:0006554,5.32e-08,47;UBERON:0007503,6.11e-08,78;UBERON:0000119,1.01e-07,309;UBERON:0003103,1.28e-07,68;UBERON:0004211,1.89e-07,15;UBERON:0009773,1.89e-07,15;UBERON:0001231,1.89e-07,15;UBERON:0001285,1.89e-07,15;UBERON:0007684,1.89e-07,15;UBERON:0004208,1.89e-07,15;UBERON:0000483,3.39e-07,306;UBERON:0004111,3.41e-07,240;UBERON:0006555,3.48e-07,16;UBERON:0004819,3.48e-07,16;UBERON:0009569,4.66e-07,112;UBERON:0000353,4.95e-07,15;UBERON:0004921,5.13e-07,118 | |||
|phase1_expression=3.45188920614058,5.78071414505655,3.38290569830331,4.00293193412522,2.68176656656373,4.36169262050184,5.06599756336621,5.68547886084148,6.00726944859629,7.37201809504527,20.9340350391728,14.1986891884612,15.0347177590219,3.58922423584135,6.95934489028623,2.01697543935533,4.82155622419182,4.38186054232424,5.36726078669558,7.01790031037691,11.8320400921667,12.5381888591235,2.0036519099174,2.46373965131192,3.01302335027527,10.0101561529816,9.44156778674376,10.547244696033,0.393364276848904,0.767658796194425,0.619264493264304,22.0661093874943,17.4699432891385,18.8574545185062,0,0.995184627411951,1.46800219667424,0,0.401088894940283,0.434021741431704,0,0,0,0.581592955118259,0,0,0.697287110717054,0.822335776043652,0,0.28769239232215,0,0,0.344745680736619,0,0,0,0.818718450173537,0,0,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0,0.628975936525128,0,0,0,0,0,0.365328307529268,5.27988733383968,6.55366333514558,4.44754626931777,2.56038133539904,2.40237592221607,4.02326707968138,4.62731410949403,3.81621501814146,9.10740750575117,5.28513470433845,2.6759125968766,1.32171328579026,2.80254281490768,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0.869409257205157,0,0,0,0.226618685395132,0,0,0.506039384039006,0.95569624297229,0,0,0,0,0,0.236777252044017,0,0.403213486449465,0,0.434473211648397,24.3806866313962,10.7312137552582,6.77671577770711,0.361439152384566,0,0.724232594804119,0,0,4.91581049253153,7.31707011626461,6.32410456990508,2.61958150995425,25.8649654687705,17.7976532536526,0,0,0.132957960518865,0,0,0.74291500265913,8.74554592413502,8.60234595106124,7.28995053375948,6.78369530308812,10.9069853414576,10.7296036356626,8.15080369493561,6.46041897923322,6.75955899104749,5.02080919147005,14.0990260988201,10.6438094800592,17.0843440283719,9.19157700864672,13.7724131139899,7.76907636071494,12.5736448670655,9.00891843866578,15.3316637465883,11.3911879148175,8.61048196472914,0,0,15.2632918249887,3.47880366186723,3.16576279161449,1.98613771219828,2.29469296599051,5.67469411517371,6.72813120170769,8.5399196583764,7.15335890409764,6.22422070799533,8.62148301246004,10.2980998961479,14.5303130539134,10.37116664064,7.0296429550139,4.05808099879417,7.98660550162229,7.77133138869366,3.40560046066918,6.47491777472526,5.19667984798319,6.1246251376468,4.91337269247072,8.26606249406124,10.6920257155385,5.93440630268536,17.2930658768225,20.8399261126709,2.35670559535693,4.50426671539071,4.71008996323111,4.38977620880838,10.4205850571667,7.81237906314303,5.21788042536097,4.12596162084383,6.40672166455702,4.23863802319124,5.10154863343484,6.49230934202165,6.1833729610951,7.81690796592677,3.03797398034279,5.65134629934952,6.56327813034698,6.71964260088785,5.33431987502079,5.32514388774922,4.43309232201617,6.61286310010902,4.05847791642923,4.90943017063502,4.58887352622406,7.68434348616451,7.02407772103872,7.43641234364918,5.28671380578389,6.30802127189071,4.74470566798579,14.0804579096834,13.5080597020506,16.5761905622977,9.28735856063958,11.5500717067134,5.32380600179297,5.39471008249925,2.41011029883482,6.06616850028167,6.31850387867978,4.27087114399974,6.87639671616838,4.12065076763227,5.77120735419586,14.763109092493,11.2193419042757,15.2282384192618,11.7606969108434,1.26755034821831,0.982827216677626,2.36315962672562,0,3.44367627920718,6.51957679134397,8.67027254728142,21.3563331189477,9.95236826875145,11.1106134190236,0.651616610620649,11.4392826380754,10.1031939417691,2.43453850447661,7.51415643109259,12.7042474029745,18.0564349904878,14.0788072653603,6.3216351836742,4.29243081047436,0,0.468008530278475,0,2.81201501960331,4.53551746136921,4.53680311175637,8.23938408866204,9.00965209393282,19.1691339582606,0,0,1.03664057770386,0.432359860250884,0.6312121671319,1.14296209725904,3.05590740446622,3.51652341630141,6.84289784090821,2.87916979569306,5.70651809903443,1.42913216315289,6.2793407233402,17.0024426844979,6.7471222955274,2.58543431515556,32.1890801266694,6.762422020448,5.05282421511254,5.2003718455683,3.60090323966999,4.25547396069835,3.46348832720929,7.57783366388182,5.96883765930587,7.40916303102692,4.88604276440603,8.88479871856365,4.75171123760058,5.12446941001296,1.74306691720059,6.99810938274399,0,0,0,3.35474797688216,2.29723871668228,0,2.17171960001369,1.2328579353023,0.716243852959582,1.34502172792233,0,0.431255149719035,1.41177339907723,0.508189248444927,0,0.773288812777695,0,0,0,0,0,3.0672872929785,5.50187573165645,4.34024037919577,12.2702808303176,7.49401752948079,8.98903765693428,7.9656162195045,5.11608369537122,2.27407504055985,3.10419213877515,1.99267679560631,4.24049087645917,3.90976265106373,15.859893754482,16.4708843429211,0.620304078368662,0.431428401637234,0.426910231213777,6.97193414326397,18.3078983461547,16.3290758398027,3.47350930946288,3.99001130548962,3.36792113319688,3.84417447767103,3.07024349440022,3.37793234401576,1.48418066444991,5.70575867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| |||
|short_description=p4@PDLIM1 | |||
}} |
Latest revision as of 03:02, 20 September 2015
Short description: | p4@PDLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDLIM1_5end |
Coexpression cluster: | C2083_Placental_acantholytic_Amniotic_Endothelial_Tracheal_Urothelial_Fibroblast |
Association with transcript: | -35bp_to_ENST00000329399, NM_020992, uc001kkh.2, uc001kki.2, uc001kkj.1, uc009xuv.2_5end |
EntrezGene: | PDLIM1 |
HGNC: | 2067 |
UniProt: | O00151 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.34e-23 | 250 |
epithelial cell | 2.42e-21 | 253 |
mesodermal cell | 3.01e-16 | 121 |
squamous epithelial cell | 1.69e-13 | 63 |
endothelial cell | 3.82e-12 | 36 |
lining cell | 4.57e-12 | 58 |
barrier cell | 4.57e-12 | 58 |
meso-epithelial cell | 1.15e-11 | 45 |
endothelial cell of vascular tree | 2.17e-11 | 24 |
blood vessel endothelial cell | 1.88e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-09 | 18 |
kidney cell | 5.09e-08 | 17 |
kidney epithelial cell | 5.09e-08 | 17 |
fibroblast | 1.87e-07 | 76 |
epithelial cell of nephron | 1.89e-07 | 15 |