FFCP PHASE1:Hg19::chr8:116680215..116680245,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:116680215..116680245,-
|short_description=p6@TRPS1
|description=CAGE_peak_6_at_TRPS1_5end
|association_with_transcript=0bp_to_ENST00000520276,uc011lhy.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7227 | |EntrezGene=7227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |HGNC=12340 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000520276,uc011lhy.1_5end | |||
|cluster_id=chr8:116680215..116680245,- | |||
|description=CAGE_peak_6_at_TRPS1_5end | |||
|id=chr8:116680215..116680245,- | |||
|ontology_enrichment_celltype=CL:0002009!6.72e-13!65;CL:0002194!9.87e-13!63;CL:0000576!9.87e-13!63;CL:0000040!9.87e-13!63;CL:0000559!9.87e-13!63;CL:0000557!2.66e-10!71;CL:0002057!5.61e-10!42;CL:0000839!1.29e-09!70;CL:0000766!1.34e-08!76;CL:0000860!4.23e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.03e-11;39!CL:0000234;1.03e-11;39!CL:0000860;1.55e-10;33!CL:0002057;1.55e-10;33!CL:0000576;1.28e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,9.69e-14,59;CL:0000576,9.69e-14,59;CL:0000040,9.69e-14,59;CL:0000559,9.69e-14,59;CL:0002009,1.63e-13,61;CL:0000473,6.00e-12,48;CL:0000234,6.00e-12,48;CL:0000557,7.04e-11,67;CL:0000839,1.27e-10,66;CL:0000766,2.08e-09,72;CL:0000860,6.94e-09,42;CL:0002057,6.94e-09,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.56e-17!167;UBERON:0004765!9.05e-14!101;UBERON:0001434!9.05e-14!101;UBERON:0001049!4.50e-13!57;UBERON:0005068!4.50e-13!57;UBERON:0006241!4.50e-13!57;UBERON:0007135!4.50e-13!57;UBERON:0002616!2.17e-12!59;UBERON:0001474!4.28e-12!86;UBERON:0001017!5.98e-11!82;UBERON:0000062!6.27e-11!511;UBERON:0005743!1.32e-10!86;UBERON:0002371!1.41e-10!80;UBERON:0007023!6.72e-10!115;UBERON:0003075!1.34e-09!86;UBERON:0007284!1.34e-09!86;UBERON:0000955!1.94e-09!69;UBERON:0006238!1.94e-09!69;UBERON:0003080!4.78e-09!42;UBERON:0002346!6.75e-09!90;UBERON:0002020!1.45e-08!34;UBERON:0003528!1.45e-08!34;UBERON:0002780!1.53e-08!41;UBERON:0001890!1.53e-08!41;UBERON:0006240!1.53e-08!41;UBERON:0000073!1.94e-08!94;UBERON:0001016!1.94e-08!94;UBERON:0001893!3.81e-08!34;UBERON:0000468!4.62e-08!659;UBERON:0002791!4.75e-08!33;UBERON:0001869!1.83e-07!32;UBERON:0000479!1.92e-07!787;UBERON:0000922!2.92e-07!612;UBERON:0002390!4.54e-07!102;UBERON:0003061!4.54e-07!102;UBERON:0000467!7.21e-07!625;UBERON:0002050!7.57e-07!605;UBERON:0005423!7.57e-07!605;UBERON:0000480!8.29e-07!626;UBERON:0000033!9.69e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.86e-08;34!UBERON:0002020;4.86e-08;34!UBERON:0002791;7.60e-08;32!UBERON:0001893;9.04e-08;34!UBERON:0001869;1.90e-07;32!UBERON:0000073;6.43e-07;53!UBERON:0002616;6.43e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.66e-18,167;UBERON:0001434,8.13e-17,100;UBERON:0004765,1.23e-14,90;UBERON:0001474,2.04e-13,82;UBERON:0001049,1.40e-12,56;UBERON:0005068,1.40e-12,56;UBERON:0006241,1.40e-12,56;UBERON:0007135,1.40e-12,56;UBERON:0000073,2.37e-11,53;UBERON:0002616,2.37e-11,53;UBERON:0002371,2.42e-11,76;UBERON:0001017,8.92e-11,81;UBERON:0003528,9.78e-10,34;UBERON:0002020,9.78e-10,34;UBERON:0000955,1.89e-09,68;UBERON:0006238,1.89e-09,68;UBERON:0001893,3.17e-09,34;UBERON:0003075,3.73e-09,82;UBERON:0007284,3.73e-09,82;UBERON:0002791,1.07e-08,32;UBERON:0001016,1.29e-08,89;UBERON:0002780,1.91e-08,41;UBERON:0001890,1.91e-08,41;UBERON:0003080,1.91e-08,41;UBERON:0006240,1.91e-08,41;UBERON:0001869,2.21e-08,32;UBERON:0007023,2.47e-08,114;UBERON:0002346,5.11e-08,86;UBERON:0010314,5.82e-08,132;UBERON:0000479,1.45e-07,773;UBERON:0002405,7.49e-07,93 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,1.12763523276777,3.00219895059391,0.446961094427288,1.74467704820074,0,0,0.783556884599516,0,0,0,0,2.97039247104112,3.97676850873499,0.672325146451775,0,0,0.487932798790507,1.23121058076788,1.42800483870977,0.626909442956176,3.14859585844162,2.73748850145768,2.13422487311165,0,0,0,0.393364276848904,1.15148819429164,1.23852898652861,0,0,0,0.232401601740905,1.27952309238679,2.34880351467878,0.553995408531877,1.60435557976113,0.434021741431704,7.61312612415743,5.50619232232265,8.24241816429397,4.9435401185052,1.51150377475524,3.39617685662943,1.85943229524548,0.411167888021826,1.23882548358041,4.31538588483226,4.35473201099471,4.02019790810595,3.7922024881028,2.5819387343353,1.35426486594342,1.12945403725563,1.09162460023138,0.898893937780338,3.97909060082173,1.92557416245656,0.639337125799041,3.29851300186716,3.98927315243264,4.68847225585964,1.45104619314292,2.26954089876456,2.4912889959823,4.52247597462138,3.65038042894141,3.04064382587163,0.605399502633369,2.20966581592539,2.21523671208619,2.32380814943136,0.850417199860174,1.25795187305026,2.80821577866238,4.05477610672067,2.08943262706204,0.285012743741249,0.19891667719909,0.730656615058536,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,0,0,0,1.17447437874188,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,0.393419540227666,0.393010762749165,0.411202997999018,0,0,0,3.89653456815823,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0.444859689486181,0,0,0,0.383220493601921,0,0.506039384039006,0.637130828648193,0.651083453856419,0,0.903450714466637,0.639933055772092,0,0.473554504088034,0.821127996921047,0,0,0.434473211648397,12.1903433156981,2.01210257911091,1.53435074212236,3.2529523714611,3.00802746381534,1.44846518960824,19.0868627292264,7.78615792484217,2.07976597760949,1.55210578223795,1.31752178539689,1.37528029272598,0,0,0.97364218096405,1.91542711029194,3.0580330919339,0.476981248610684,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,2.98183171017191,1.2663051166458,2.25095607382472,8.03142538096678,2.12801029319014,2.24271040056923,1.06748995729705,0.49333509683432,9.95875313279252,1.75123873690594,3.43269996538263,1.36221684880438,1.15235184896,0,0.624320153660641,0.570471821544449,0.597794722207204,0.704606991862589,0.971237666208789,0.842704840213491,0.204154171254893,1.59684612505298,1.13658359293342,1.18800285728205,2.96720315134268,0,0,1.68336113954066,2.25213335769535,2.21651292387346,0.877955241761676,2.14541457059314,1.95309476578576,0.567160915800105,5.02290979928813,2.34913127700424,1.69545520927649,3.00091096084402,2.57631323096097,3.86460810068444,1.30281799432113,2.53164498361899,1.75386609290158,4.79624171063818,2.11714766877288,0.323292113637624,4.26011511019937,2.41805035746337,0.169560592310488,0,0.272746120590835,0.286804595389004,0.609868530647977,0.265059536642971,0.580969714347592,0.414644220061482,0.504641701751257,0.36497735907583,1.56449532329816,3.21620469096443,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0.686271241194102,0,0,0,0.370353780634118,0,0,0,0.231860809950154,2.81780866165972,0,0,0,2.37061319387782,0,6.15542515218493,1.8720341211139,5.64798416697167,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0.190493682876507,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0,0.897048674762886,1.30788020649984,0.4400297149257,1.55126058909333,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,1.0656887160644,0.428933980974443,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.899756920638513,2.43247561282381,4.01805673145701,4.21667878966063,2.15662369942424,2.29723871668228,2.85273810081437,1.30303176000821,3.28762116080613,2.14873155887875,0,0,0.431255149719035,0.128343036279748,4.31960861178188,3.90419561572865,0,0.502548796003046,1.91381625495949,0,0,0.414415513436035,2.57652132610194,7.50255781589516,3.25518028439683,1.87173775377726,1.07057393278297,2.20783381047509,1.63997980989798,2.10662269809403,0,6.2083842775503,1.32845119707087,2.21243002250044,1.12948698808508,0.783204629850962,0.343143423810856,0.620304078368662,1.94142780736755,1.06727557803444,0,0,0.30239029332968,0.496215615637554,0.767309866440312,0.841980283299221,1.02511319404561,1.02341449813341,2.2519548960105,0,0.308419387605311,0.355123450626254,0.246381468041427,2.59627214591811,0.348631135379878,0.120859449591622,0,0.184161977871793,0,1.27463817604702,0.786746489756545,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.769350375349168,0,0.650756789328606,0.721287081534056,10.3473495244728,6.02319349420292,0,0.650060246036521,0,2.90012154876366,2.46477787383431,2.6095624703442,0.689182862422653,2.79292636657511,4.0604674295984,2.21589231281862,2.49289699810865,0,0,0.382838137483752,0,1.85938219718914,4.09256050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| ||
|short_description=p6@TRPS1 | |||
}} | }} |
Latest revision as of 06:35, 25 September 2015
Short description: | p6@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRPS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000520276, uc011lhy.1_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 9.69e-14 | 59 |
monocyte | 9.69e-14 | 59 |
monoblast | 9.69e-14 | 59 |
promonocyte | 9.69e-14 | 59 |
macrophage dendritic cell progenitor | 1.63e-13 | 61 |
defensive cell | 6.00e-12 | 48 |
phagocyte | 6.00e-12 | 48 |
granulocyte monocyte progenitor cell | 7.04e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.27e-10 | 66 |
myeloid leukocyte | 2.08e-09 | 72 |
classical monocyte | 6.94e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.94e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.66e-18 | 167 |
skeletal system | 8.13e-17 | 100 |
skeletal element | 1.23e-14 | 90 |
bone element | 2.04e-13 | 82 |
neural tube | 1.40e-12 | 56 |
neural rod | 1.40e-12 | 56 |
future spinal cord | 1.40e-12 | 56 |
neural keel | 1.40e-12 | 56 |
regional part of nervous system | 2.37e-11 | 53 |
regional part of brain | 2.37e-11 | 53 |
bone marrow | 2.42e-11 | 76 |
central nervous system | 8.92e-11 | 81 |
brain grey matter | 9.78e-10 | 34 |
gray matter | 9.78e-10 | 34 |
brain | 1.89e-09 | 68 |
future brain | 1.89e-09 | 68 |
telencephalon | 3.17e-09 | 34 |
neural plate | 3.73e-09 | 82 |
presumptive neural plate | 3.73e-09 | 82 |
regional part of telencephalon | 1.07e-08 | 32 |
nervous system | 1.29e-08 | 89 |
regional part of forebrain | 1.91e-08 | 41 |
forebrain | 1.91e-08 | 41 |
anterior neural tube | 1.91e-08 | 41 |
future forebrain | 1.91e-08 | 41 |
cerebral hemisphere | 2.21e-08 | 32 |
adult organism | 2.47e-08 | 114 |
neurectoderm | 5.11e-08 | 86 |
structure with developmental contribution from neural crest | 5.82e-08 | 132 |
tissue | 1.45e-07 | 773 |
immune system | 7.49e-07 | 93 |