FFCP PHASE1:Hg19::chr13:80055432..80055449,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54602 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18537 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-138bp_to_ENST00000487865_5end | |||
|cluster_id=chr13:80055432..80055449,+ | |||
|coexpression_cluster_id=C2272 | |||
|description=CAGE_peak_4_at_NDFIP2_5end | |||
|id=chr13:80055432..80055449,+ | |||
|ontology_enrichment_celltype=CL:0002076!8.50e-15!43;CL:0000223!1.35e-14!59;CL:0002251!9.63e-11!21;CL:0000066!3.01e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.55e-11;42!CL:0002251;1.54e-10;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.00e-15,42;CL:0000223,2.11e-14,58;CL:0002251,1.29e-10,20;CL:0000066,1.96e-09,253;CL:0002159,9.37e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000223;1.65e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!5.43e-09!143;DOID:305!8.02e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.06e-08,143;DOID:305,2.40e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.43e-19!347;UBERON:0000475!9.00e-19!365;UBERON:0004119!2.00e-18!169;UBERON:0000925!2.00e-18!169;UBERON:0006595!2.00e-18!169;UBERON:0000064!2.20e-16!219;UBERON:0001007!4.06e-15!155;UBERON:0001555!4.06e-15!155;UBERON:0007026!4.06e-15!155;UBERON:0000062!2.64e-14!511;UBERON:0004921!4.79e-14!129;UBERON:0004185!4.79e-14!129;UBERON:0004121!1.07e-11!169;UBERON:0001893!2.12e-11!34;UBERON:0000077!2.58e-11!130;UBERON:0000924!2.70e-11!173;UBERON:0006601!2.70e-11!173;UBERON:0001869!2.85e-11!32;UBERON:0000468!6.89e-11!659;UBERON:0002780!7.45e-11!41;UBERON:0001890!7.45e-11!41;UBERON:0006240!7.45e-11!41;UBERON:0002791!8.11e-11!33;UBERON:0002020!1.18e-10!34;UBERON:0003528!1.18e-10!34;UBERON:0000467!2.18e-10!625;UBERON:0002619!2.40e-10!22;UBERON:0003080!2.70e-10!42;UBERON:0000480!3.01e-10!626;UBERON:0001950!1.24e-09!20;UBERON:0000033!2.42e-09!123;UBERON:0003104!2.95e-09!238;UBERON:0009142!2.95e-09!238;UBERON:0000153!4.87e-09!129;UBERON:0007811!4.87e-09!129;UBERON:0000956!7.28e-09!25;UBERON:0000203!7.28e-09!25;UBERON:0002616!9.50e-09!59;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0004923!1.21e-08!57;UBERON:0000483!3.02e-08!309;UBERON:0003102!3.54e-08!95;UBERON:0000119!9.02e-08!312;UBERON:0002050!9.74e-08!605;UBERON:0005423!9.74e-08!605;UBERON:0000923!1.08e-07!604;UBERON:0005291!1.08e-07!604;UBERON:0006598!1.08e-07!604;UBERON:0002532!1.08e-07!604;UBERON:0001041!1.35e-07!98;UBERON:0000922!2.86e-07!612;UBERON:0000955!3.11e-07!69;UBERON:0006238!3.11e-07!69;UBERON:0000344!6.95e-07!12;UBERON:0001004!7.57e-07!72;UBERON:0005631!8.69e-07!14;UBERON:0000158!8.69e-07!14;UBERON:0001017!9.35e-07!82;UBERON:0000160!9.61e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.26e-11;32!UBERON:0001893;7.40e-11;34!UBERON:0002619;7.98e-11;22!UBERON:0002791;2.59e-10;32!UBERON:0003528;4.76e-10;34!UBERON:0002020;4.76e-10;34!UBERON:0001950;4.87e-10;20!UBERON:0000956;1.47e-09;25!UBERON:0000203;1.47e-09;25!UBERON:0002780;1.55e-08;41!UBERON:0001890;1.55e-08;41!UBERON:0004921;2.23e-07;33!UBERON:0005409;7.16e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,9.06e-20,223;UBERON:0004119,8.53e-16,160;UBERON:0000925,8.53e-16,160;UBERON:0006595,8.53e-16,160;UBERON:0001007,5.16e-13,145;UBERON:0001555,5.16e-13,145;UBERON:0007026,5.16e-13,145;UBERON:0004921,4.40e-12,118;UBERON:0001893,1.12e-11,34;UBERON:0001869,1.52e-11,32;UBERON:0004121,2.13e-11,171;UBERON:0000924,2.13e-11,171;UBERON:0006601,2.13e-11,171;UBERON:0003528,6.57e-11,34;UBERON:0002020,6.57e-11,34;UBERON:0002780,7.25e-11,41;UBERON:0001890,7.25e-11,41;UBERON:0003080,7.25e-11,41;UBERON:0006240,7.25e-11,41;UBERON:0002791,7.47e-11,32;UBERON:0002619,1.36e-10,22;UBERON:0001950,7.34e-10,20;UBERON:0010371,1.44e-09,104;UBERON:0000073,1.53e-09,53;UBERON:0002616,1.53e-09,53;UBERON:0003102,1.94e-09,99;UBERON:0001049,4.49e-09,56;UBERON:0005068,4.49e-09,56;UBERON:0006241,4.49e-09,56;UBERON:0007135,4.49e-09,56;UBERON:0000956,4.54e-09,25;UBERON:0000203,4.54e-09,25;UBERON:0004923,3.19e-08,66;UBERON:0000483,1.55e-07,306;UBERON:0000955,1.57e-07,68;UBERON:0006238,1.57e-07,68;UBERON:0000119,4.70e-07,309;UBERON:0005631,6.18e-07,14;UBERON:0000158,6.18e-07,14;UBERON:0001017,7.94e-07,81 | |||
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| |||
|short_description=p4@NDFIP2 | |||
}} |
Latest revision as of 02:28, 18 September 2015
Short description: | p4@NDFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NDFIP2_5end |
Coexpression cluster: | C2272_amniotic_chorionic_oral_glassy_colon_epidermoid_Mallassezderived |
Association with transcript: | -138bp_to_ENST00000487865_5end |
EntrezGene: | NDFIP2 |
HGNC: | 18537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.00e-15 | 42 |
endodermal cell | 2.11e-14 | 58 |
epithelial cell of alimentary canal | 1.29e-10 | 20 |
epithelial cell | 1.96e-09 | 253 |
general ecto-epithelial cell | 9.37e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.06e-08 | 143 |
carcinoma | 2.40e-08 | 106 |