FFCP PHASE1:Hg19::chr15:100106244..100106259,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6993 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENST00000557942_5end | |||
|cluster_id=chr15:100106244..100106259,+ | |||
|description=CAGE_peak_2_at_MEF2A_5end | |||
|id=chr15:100106244..100106259,+ | |||
|ontology_enrichment_celltype=CL:0002057!6.08e-15!42;CL:0000860!4.11e-14!45;CL:0002009!8.08e-14!65;CL:0002194!5.28e-13!63;CL:0000576!5.28e-13!63;CL:0000040!5.28e-13!63;CL:0000559!5.28e-13!63;CL:0000557!1.37e-12!71;CL:0000766!2.52e-12!76;CL:0000839!1.04e-11!70;CL:0000738!2.29e-10!140;CL:0002087!7.35e-09!119;CL:0000763!9.38e-09!112;CL:0000049!9.38e-09!112;CL:0002031!2.98e-08!124;CL:0000037!1.40e-07!172;CL:0000566!1.40e-07!172;CL:0000988!5.88e-07!182;CL:0002032!6.01e-07!165;CL:0000837!6.01e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-14;33!CL:0002057;2.30e-14;33!CL:0000473;6.24e-12;39!CL:0000234;6.24e-12;39!CL:0000576;6.01e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.38e-16,42;CL:0002057,7.38e-16,42;CL:0000473,7.89e-16,48;CL:0000234,7.89e-16,48;CL:0002009,3.75e-15,61;CL:0002194,2.92e-14,59;CL:0000576,2.92e-14,59;CL:0000040,2.92e-14,59;CL:0000559,2.92e-14,59;CL:0000557,1.51e-13,67;CL:0000766,2.85e-13,72;CL:0000839,1.40e-12,66;CL:0000738,7.96e-11,136;CL:0000763,2.04e-09,108;CL:0000049,2.04e-09,108;CL:0002087,2.64e-09,115;CL:0002031,1.53e-08,120;CL:0000037,5.86e-08,168;CL:0000988,1.42e-07,177;CL:0002032,2.77e-07,161;CL:0000837,2.77e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;7.97e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.23e-32!115;UBERON:0001049!4.80e-12!57;UBERON:0005068!4.80e-12!57;UBERON:0006241!4.80e-12!57;UBERON:0007135!4.80e-12!57;UBERON:0003080!1.07e-11!42;UBERON:0002780!2.29e-11!41;UBERON:0001890!2.29e-11!41;UBERON:0006240!2.29e-11!41;UBERON:0001474!8.54e-11!86;UBERON:0001893!1.64e-10!34;UBERON:0002390!2.34e-10!102;UBERON:0003061!2.34e-10!102;UBERON:0002371!2.71e-10!80;UBERON:0002619!3.07e-10!22;UBERON:0001950!4.67e-10!20;UBERON:0005743!5.36e-10!86;UBERON:0002791!5.94e-10!33;UBERON:0002020!6.90e-10!34;UBERON:0003528!6.90e-10!34;UBERON:0001869!7.36e-10!32;UBERON:0001017!8.40e-10!82;UBERON:0000073!8.72e-10!94;UBERON:0001016!8.72e-10!94;UBERON:0002193!1.05e-09!112;UBERON:0000955!2.31e-09!69;UBERON:0006238!2.31e-09!69;UBERON:0002405!3.51e-09!115;UBERON:0002616!3.97e-09!59;UBERON:0000956!4.41e-09!25;UBERON:0000203!4.41e-09!25;UBERON:0004765!5.12e-09!101;UBERON:0001434!5.12e-09!101;UBERON:0000062!8.14e-07!511;UBERON:0002346!9.89e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.39e-10;22!UBERON:0001950;1.88e-10;20!UBERON:0000956;9.73e-10;25!UBERON:0000203;9.73e-10;25!UBERON:0001893;1.52e-09;34!UBERON:0001869;2.92e-09;32!UBERON:0002791;6.36e-09;32!UBERON:0002780;7.50e-09;41!UBERON:0001890;7.50e-09;41!UBERON:0003528;8.00e-09;34!UBERON:0002020;8.00e-09;34!UBERON:0007023;8.54e-09;114!UBERON:0000073;2.12e-07;53!UBERON:0002616;2.12e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.97e-33,114;UBERON:0001049,2.77e-12,56;UBERON:0005068,2.77e-12,56;UBERON:0006241,2.77e-12,56;UBERON:0007135,2.77e-12,56;UBERON:0002780,9.48e-12,41;UBERON:0001890,9.48e-12,41;UBERON:0003080,9.48e-12,41;UBERON:0006240,9.48e-12,41;UBERON:0000073,3.85e-11,53;UBERON:0002616,3.85e-11,53;UBERON:0001474,5.08e-11,82;UBERON:0002619,7.83e-11,22;UBERON:0001893,7.99e-11,34;UBERON:0002405,9.47e-11,93;UBERON:0002371,9.98e-11,76;UBERON:0002390,1.10e-10,98;UBERON:0003061,1.10e-10,98;UBERON:0001950,1.23e-10,20;UBERON:0001017,2.74e-10,81;UBERON:0002193,2.76e-10,108;UBERON:0003528,3.62e-10,34;UBERON:0002020,3.62e-10,34;UBERON:0001869,3.95e-10,32;UBERON:0001016,4.50e-10,89;UBERON:0002791,8.32e-10,32;UBERON:0000955,1.20e-09,68;UBERON:0006238,1.20e-09,68;UBERON:0000956,1.35e-09,25;UBERON:0000203,1.35e-09,25;UBERON:0004765,8.52e-09,90;UBERON:0001434,1.07e-07,100;UBERON:0002346,8.58e-07,86;UBERON:0003075,1.00e-06,82;UBERON:0007284,1.00e-06,82 | |||
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| |||
|short_description=p2@MEF2A | |||
}} |
Latest revision as of 21:35, 16 September 2015
Short description: | p2@MEF2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEF2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000557942_5end |
EntrezGene: | MEF2A |
HGNC: | 6993 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.38e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.38e-16 | 42 |
defensive cell | 7.89e-16 | 48 |
phagocyte | 7.89e-16 | 48 |
macrophage dendritic cell progenitor | 3.75e-15 | 61 |
monopoietic cell | 2.92e-14 | 59 |
monocyte | 2.92e-14 | 59 |
monoblast | 2.92e-14 | 59 |
promonocyte | 2.92e-14 | 59 |
granulocyte monocyte progenitor cell | 1.51e-13 | 67 |
myeloid leukocyte | 2.85e-13 | 72 |
myeloid lineage restricted progenitor cell | 1.40e-12 | 66 |
leukocyte | 7.96e-11 | 136 |
myeloid cell | 2.04e-09 | 108 |
common myeloid progenitor | 2.04e-09 | 108 |
nongranular leukocyte | 2.64e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.53e-08 | 120 |
hematopoietic stem cell | 5.86e-08 | 168 |
hematopoietic cell | 1.42e-07 | 177 |
hematopoietic oligopotent progenitor cell | 2.77e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.77e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.97e-33 | 114 |
neural tube | 2.77e-12 | 56 |
neural rod | 2.77e-12 | 56 |
future spinal cord | 2.77e-12 | 56 |
neural keel | 2.77e-12 | 56 |
regional part of forebrain | 9.48e-12 | 41 |
forebrain | 9.48e-12 | 41 |
anterior neural tube | 9.48e-12 | 41 |
future forebrain | 9.48e-12 | 41 |
regional part of nervous system | 3.85e-11 | 53 |
regional part of brain | 3.85e-11 | 53 |
bone element | 5.08e-11 | 82 |
regional part of cerebral cortex | 7.83e-11 | 22 |
telencephalon | 7.99e-11 | 34 |
immune system | 9.47e-11 | 93 |
bone marrow | 9.98e-11 | 76 |
hematopoietic system | 1.10e-10 | 98 |
blood island | 1.10e-10 | 98 |
neocortex | 1.23e-10 | 20 |
central nervous system | 2.74e-10 | 81 |
hemolymphoid system | 2.76e-10 | 108 |
brain grey matter | 3.62e-10 | 34 |
gray matter | 3.62e-10 | 34 |
cerebral hemisphere | 3.95e-10 | 32 |
nervous system | 4.50e-10 | 89 |
regional part of telencephalon | 8.32e-10 | 32 |
brain | 1.20e-09 | 68 |
future brain | 1.20e-09 | 68 |
cerebral cortex | 1.35e-09 | 25 |
pallium | 1.35e-09 | 25 |
skeletal element | 8.52e-09 | 90 |
skeletal system | 1.07e-07 | 100 |
neurectoderm | 8.58e-07 | 86 |
neural plate | 1.00e-06 | 82 |
presumptive neural plate | 1.00e-06 | 82 |