FFCP PHASE1:Hg19::chr16:75498308..75498348,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124491 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29577 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002feb.2_5end | |||
|cluster_id=chr16:75498308..75498348,- | |||
|description=CAGE_peak_2_at_TMEM170A_5end | |||
|id=chr16:75498308..75498348,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.21e-21!115;UBERON:0001049!1.82e-18!57;UBERON:0005068!1.82e-18!57;UBERON:0006241!1.82e-18!57;UBERON:0007135!1.82e-18!57;UBERON:0000073!5.02e-18!94;UBERON:0001016!5.02e-18!94;UBERON:0005743!5.53e-17!86;UBERON:0001017!1.28e-16!82;UBERON:0003080!1.06e-14!42;UBERON:0002616!2.64e-14!59;UBERON:0000955!3.23e-14!69;UBERON:0006238!3.23e-14!69;UBERON:0002780!4.37e-14!41;UBERON:0001890!4.37e-14!41;UBERON:0006240!4.37e-14!41;UBERON:0002020!8.07e-13!34;UBERON:0003528!8.07e-13!34;UBERON:0001893!8.51e-13!34;UBERON:0002346!1.17e-12!90;UBERON:0002791!1.82e-12!33;UBERON:0001869!3.65e-12!32;UBERON:0003075!5.37e-12!86;UBERON:0007284!5.37e-12!86;UBERON:0000956!7.16e-11!25;UBERON:0000203!7.16e-11!25;UBERON:0002619!1.73e-10!22;UBERON:0001950!1.08e-09!20;UBERON:0003056!1.22e-09!61;UBERON:0000153!1.56e-08!129;UBERON:0007811!1.56e-08!129;UBERON:0000033!1.80e-07!123;UBERON:0000924!1.80e-07!173;UBERON:0006601!1.80e-07!173;UBERON:0004121!5.75e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.76e-11;32!UBERON:0003528;1.81e-11;34!UBERON:0002020;1.81e-11;34!UBERON:0001893;1.87e-11;34!UBERON:0001869;1.89e-11;32!UBERON:0002780;2.16e-11;41!UBERON:0001890;2.16e-11;41!UBERON:0000956;3.56e-11;25!UBERON:0000203;3.56e-11;25!UBERON:0000922;9.10e-11;49!UBERON:0002619;1.62e-10;22!UBERON:0000073;2.41e-10;53!UBERON:0002616;2.41e-10;53!UBERON:0001950;9.36e-10;20!UBERON:0001017;2.26e-07;75!UBERON:0000955;3.70e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.70e-21,114;UBERON:0001049,2.58e-18,56;UBERON:0005068,2.58e-18,56;UBERON:0006241,2.58e-18,56;UBERON:0007135,2.58e-18,56;UBERON:0001016,6.67e-17,89;UBERON:0000073,8.62e-17,53;UBERON:0002616,8.62e-17,53;UBERON:0001017,4.88e-16,81;UBERON:0002780,1.27e-14,41;UBERON:0001890,1.27e-14,41;UBERON:0003080,1.27e-14,41;UBERON:0006240,1.27e-14,41;UBERON:0000955,1.11e-13,68;UBERON:0006238,1.11e-13,68;UBERON:0002346,1.71e-13,86;UBERON:0003528,2.49e-13,34;UBERON:0002020,2.49e-13,34;UBERON:0001893,2.63e-13,34;UBERON:0003075,8.29e-13,82;UBERON:0007284,8.29e-13,82;UBERON:0001869,1.17e-12,32;UBERON:0002791,1.76e-12,32;UBERON:0000956,4.08e-11,25;UBERON:0000203,4.08e-11,25;UBERON:0011216,5.85e-11,223;UBERON:0002619,1.01e-10,22;UBERON:0001950,6.57e-10,20;UBERON:0003056,7.88e-10,61;UBERON:0004121,2.44e-07,171;UBERON:0000924,2.44e-07,171;UBERON:0006601,2.44e-07,171;UBERON:0010371,3.94e-07,104 | |||
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| |||
|short_description=p2@TMEM170A | |||
}} |
Latest revision as of 21:43, 17 September 2015
Short description: | p2@TMEM170A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM170A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002feb.2_5end |
EntrezGene: | TMEM170A |
HGNC: | 29577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.70e-21 | 114 |
neural tube | 2.58e-18 | 56 |
neural rod | 2.58e-18 | 56 |
future spinal cord | 2.58e-18 | 56 |
neural keel | 2.58e-18 | 56 |
nervous system | 6.67e-17 | 89 |
regional part of nervous system | 8.62e-17 | 53 |
regional part of brain | 8.62e-17 | 53 |
central nervous system | 4.88e-16 | 81 |
regional part of forebrain | 1.27e-14 | 41 |
forebrain | 1.27e-14 | 41 |
anterior neural tube | 1.27e-14 | 41 |
future forebrain | 1.27e-14 | 41 |
brain | 1.11e-13 | 68 |
future brain | 1.11e-13 | 68 |
neurectoderm | 1.71e-13 | 86 |
brain grey matter | 2.49e-13 | 34 |
gray matter | 2.49e-13 | 34 |
telencephalon | 2.63e-13 | 34 |
neural plate | 8.29e-13 | 82 |
presumptive neural plate | 8.29e-13 | 82 |
cerebral hemisphere | 1.17e-12 | 32 |
regional part of telencephalon | 1.76e-12 | 32 |
cerebral cortex | 4.08e-11 | 25 |
pallium | 4.08e-11 | 25 |
organ system subdivision | 5.85e-11 | 223 |
regional part of cerebral cortex | 1.01e-10 | 22 |
neocortex | 6.57e-10 | 20 |
pre-chordal neural plate | 7.88e-10 | 61 |
ectoderm-derived structure | 2.44e-07 | 171 |
ectoderm | 2.44e-07 | 171 |
presumptive ectoderm | 2.44e-07 | 171 |
ecto-epithelium | 3.94e-07 | 104 |