FFCP PHASE1:Hg19::chr22:38888048..38888071,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10521 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2740 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=48bp_to_uc010gxp.2_5end | |||
|cluster_id=chr22:38888048..38888071,- | |||
|description=CAGE_peak_8_at_DDX17_5end | |||
|id=chr22:38888048..38888071,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-17!115;UBERON:0001049!1.26e-14!57;UBERON:0005068!1.26e-14!57;UBERON:0006241!1.26e-14!57;UBERON:0007135!1.26e-14!57;UBERON:0002780!7.95e-13!41;UBERON:0001890!7.95e-13!41;UBERON:0006240!7.95e-13!41;UBERON:0003080!5.99e-12!42;UBERON:0002020!7.50e-11!34;UBERON:0003528!7.50e-11!34;UBERON:0001893!2.21e-10!34;UBERON:0002791!2.29e-10!33;UBERON:0002616!2.98e-10!59;UBERON:0001017!9.66e-10!82;UBERON:0001869!1.43e-09!32;UBERON:0005743!2.08e-09!86;UBERON:0002346!9.01e-09!90;UBERON:0000955!1.06e-08!69;UBERON:0006238!1.06e-08!69;UBERON:0003075!1.41e-08!86;UBERON:0007284!1.41e-08!86;UBERON:0000073!2.69e-08!94;UBERON:0001016!2.69e-08!94;UBERON:0002619!1.07e-07!22;UBERON:0000956!3.01e-07!25;UBERON:0000203!3.01e-07!25;UBERON:0001950!7.73e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.84e-10;41!UBERON:0001890;5.84e-10;41!UBERON:0002791;6.76e-10;32!UBERON:0003528;9.25e-10;34!UBERON:0002020;9.25e-10;34!UBERON:0000073;1.85e-09;53!UBERON:0002616;1.85e-09;53!UBERON:0001893;6.18e-09;34!UBERON:0001869;7.65e-09;32!UBERON:0002619;3.84e-08;22!UBERON:0000956;2.17e-07;25!UBERON:0000203;2.17e-07;25!UBERON:0001950;4.67e-07;20!UBERON:0001017;5.16e-07;75!UBERON:0002420;5.96e-07;9!UBERON:0007245;5.96e-07;9!UBERON:0010009;5.96e-07;9!UBERON:0010011;5.96e-07;9!UBERON:0000454;5.96e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-17,114;UBERON:0001049,5.25e-17,56;UBERON:0005068,5.25e-17,56;UBERON:0006241,5.25e-17,56;UBERON:0007135,5.25e-17,56;UBERON:0000073,8.65e-15,53;UBERON:0002616,8.65e-15,53;UBERON:0002346,9.59e-14,86;UBERON:0003075,2.63e-13,82;UBERON:0007284,2.63e-13,82;UBERON:0002780,5.67e-13,41;UBERON:0001890,5.67e-13,41;UBERON:0003080,5.67e-13,41;UBERON:0006240,5.67e-13,41;UBERON:0001017,2.44e-12,81;UBERON:0003528,7.36e-12,34;UBERON:0002020,7.36e-12,34;UBERON:0002791,7.64e-11,32;UBERON:0000955,1.02e-10,68;UBERON:0006238,1.02e-10,68;UBERON:0001893,1.28e-10,34;UBERON:0001016,2.25e-10,89;UBERON:0010371,3.93e-10,104;UBERON:0001869,1.62e-09,32;UBERON:0002619,2.44e-08,22;UBERON:0003056,3.44e-08,61;UBERON:0000956,1.85e-07,25;UBERON:0000203,1.85e-07,25;UBERON:0001950,3.82e-07,20;UBERON:0002420,5.85e-07,9;UBERON:0007245,5.85e-07,9;UBERON:0010009,5.85e-07,9;UBERON:0010011,5.85e-07,9;UBERON:0000454,5.85e-07,9 | |||
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| |||
|short_description=p8@DDX17 | |||
}} |
Latest revision as of 15:51, 24 September 2015
Short description: | p8@DDX17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DDX17_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_uc010gxp.2_5end |
EntrezGene: | DDX17 |
HGNC: | 2740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-17 | 114 |
neural tube | 5.25e-17 | 56 |
neural rod | 5.25e-17 | 56 |
future spinal cord | 5.25e-17 | 56 |
neural keel | 5.25e-17 | 56 |
regional part of nervous system | 8.65e-15 | 53 |
regional part of brain | 8.65e-15 | 53 |
neurectoderm | 9.59e-14 | 86 |
neural plate | 2.63e-13 | 82 |
presumptive neural plate | 2.63e-13 | 82 |
regional part of forebrain | 5.67e-13 | 41 |
forebrain | 5.67e-13 | 41 |
anterior neural tube | 5.67e-13 | 41 |
future forebrain | 5.67e-13 | 41 |
central nervous system | 2.44e-12 | 81 |
brain grey matter | 7.36e-12 | 34 |
gray matter | 7.36e-12 | 34 |
regional part of telencephalon | 7.64e-11 | 32 |
brain | 1.02e-10 | 68 |
future brain | 1.02e-10 | 68 |
telencephalon | 1.28e-10 | 34 |
nervous system | 2.25e-10 | 89 |
ecto-epithelium | 3.93e-10 | 104 |
cerebral hemisphere | 1.62e-09 | 32 |
regional part of cerebral cortex | 2.44e-08 | 22 |
pre-chordal neural plate | 3.44e-08 | 61 |
cerebral cortex | 1.85e-07 | 25 |
pallium | 1.85e-07 | 25 |
neocortex | 3.82e-07 | 20 |
basal ganglion | 5.85e-07 | 9 |
nuclear complex of neuraxis | 5.85e-07 | 9 |
aggregate regional part of brain | 5.85e-07 | 9 |
collection of basal ganglia | 5.85e-07 | 9 |
cerebral subcortex | 5.85e-07 | 9 |