FFCP PHASE1:Hg19::chrX:119694839..119694850,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:119694839..119694850,-
|short_description=p9@CUL4B
|description=CAGE_peak_9_at_CUL4B_5end
|association_with_transcript=-22bp_to_NM_001079872,uc004esv.2_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8450 | |EntrezGene=8450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |HGNC=2555 | ||
|TSSclassifier=strong | |||
|UniProt=Q13620 | |UniProt=Q13620 | ||
|association_with_transcript=-22bp_to_NM_001079872,uc004esv.2_5end | |||
|cluster_id=chrX:119694839..119694850,- | |||
|description=CAGE_peak_9_at_CUL4B_5end | |||
|id=chrX:119694839..119694850,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.18e-10!41;UBERON:0001890!2.18e-10!41;UBERON:0006240!2.18e-10!41;UBERON:0001049!3.26e-10!57;UBERON:0005068!3.26e-10!57;UBERON:0006241!3.26e-10!57;UBERON:0007135!3.26e-10!57;UBERON:0003080!7.13e-10!42;UBERON:0000955!1.69e-09!69;UBERON:0006238!1.69e-09!69;UBERON:0002616!4.73e-09!59;UBERON:0002020!5.58e-09!34;UBERON:0003528!5.58e-09!34;UBERON:0000475!8.30e-09!365;UBERON:0001017!1.61e-08!82;UBERON:0001869!2.48e-08!32;UBERON:0001893!2.81e-08!34;UBERON:0005743!3.33e-08!86;UBERON:0000073!3.46e-08!94;UBERON:0001016!3.46e-08!94;UBERON:0002791!4.30e-08!33;UBERON:0000033!7.47e-08!123;UBERON:0000153!8.96e-08!129;UBERON:0007811!8.96e-08!129;UBERON:0003075!1.15e-07!86;UBERON:0007284!1.15e-07!86;UBERON:0002346!1.22e-07!90;UBERON:0002619!2.81e-07!22;UBERON:0000956!4.07e-07!25;UBERON:0000203!4.07e-07!25;UBERON:0000477!4.93e-07!286;UBERON:0003056!4.98e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.45e-08;41!UBERON:0001890;4.45e-08;41!UBERON:0001869;1.78e-07;32!UBERON:0003528;1.94e-07;34!UBERON:0002020;1.94e-07;34!UBERON:0002791;2.23e-07;32!UBERON:0000956;3.97e-07;25!UBERON:0000203;3.97e-07;25!UBERON:0002619;5.36e-07;22!UBERON:0000073;8.49e-07;53!UBERON:0002616;8.49e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.45e-11,56;UBERON:0005068,2.45e-11,56;UBERON:0006241,2.45e-11,56;UBERON:0007135,2.45e-11,56;UBERON:0002780,2.15e-10,41;UBERON:0001890,2.15e-10,41;UBERON:0003080,2.15e-10,41;UBERON:0006240,2.15e-10,41;UBERON:0000073,2.25e-10,53;UBERON:0002616,2.25e-10,53;UBERON:0000955,2.63e-10,68;UBERON:0006238,2.63e-10,68;UBERON:0001017,2.83e-09,81;UBERON:0003528,4.32e-09,34;UBERON:0002020,4.32e-09,34;UBERON:0001016,5.78e-09,89;UBERON:0011216,1.50e-08,223;UBERON:0001869,2.10e-08,32;UBERON:0001893,2.33e-08,34;UBERON:0002346,2.60e-08,86;UBERON:0003075,3.01e-08,82;UBERON:0007284,3.01e-08,82;UBERON:0002791,3.21e-08,32;UBERON:0003056,1.02e-07,61;UBERON:0002619,1.66e-07,22;UBERON:0000956,2.41e-07,25;UBERON:0000203,2.41e-07,25;UBERON:0010314,6.17e-07,132 | |||
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| ||
|short_description=p9@CUL4B | |||
}} | }} |
Latest revision as of 06:41, 19 September 2015
Short description: | p9@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CUL4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_NM_001079872, uc004esv.2_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | Q13620 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.45e-11 | 56 |
neural rod | 2.45e-11 | 56 |
future spinal cord | 2.45e-11 | 56 |
neural keel | 2.45e-11 | 56 |
regional part of forebrain | 2.15e-10 | 41 |
forebrain | 2.15e-10 | 41 |
anterior neural tube | 2.15e-10 | 41 |
future forebrain | 2.15e-10 | 41 |
regional part of nervous system | 2.25e-10 | 53 |
regional part of brain | 2.25e-10 | 53 |
brain | 2.63e-10 | 68 |
future brain | 2.63e-10 | 68 |
central nervous system | 2.83e-09 | 81 |
brain grey matter | 4.32e-09 | 34 |
gray matter | 4.32e-09 | 34 |
nervous system | 5.78e-09 | 89 |
organ system subdivision | 1.50e-08 | 223 |
cerebral hemisphere | 2.10e-08 | 32 |
telencephalon | 2.33e-08 | 34 |
neurectoderm | 2.60e-08 | 86 |
neural plate | 3.01e-08 | 82 |
presumptive neural plate | 3.01e-08 | 82 |
regional part of telencephalon | 3.21e-08 | 32 |
pre-chordal neural plate | 1.02e-07 | 61 |
regional part of cerebral cortex | 1.66e-07 | 22 |
cerebral cortex | 2.41e-07 | 25 |
pallium | 2.41e-07 | 25 |
structure with developmental contribution from neural crest | 6.17e-07 | 132 |