FFCP PHASE1:Mm9::chr18:35722088..35722144,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=60|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:35722088..35722144,+|id=chr18:35722088..35722144,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!7.45e-11!86;UBERON:0000153!1.83e-10!94;UBERON:0000033!4.72e-10!63;UBERON:0001017!5.77e-10!73;UBERON:0005743!5.77e-10!73;UBERON:0000073!7.49e-10!75;UBERON:0001016!7.49e-10!75;UBERON:0002346!2.57e-09!71;UBERON:0003075!2.57e-09!71;UBERON:0007284!2.57e-09!71;UBERON:0001049!3.55e-09!52;UBERON:0005068!3.55e-09!52;UBERON:0006241!3.55e-09!52;UBERON:0007135!3.55e-09!52;UBERON:0000955!1.59e-08!50;UBERON:0006238!1.59e-08!50;UBERON:0003056!3.00e-08!49;UBERON:0002616!4.42e-08!49;UBERON:0002020!6.25e-08!34;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0004121!1.14e-07!102;UBERON:0000924!1.14e-07!102;UBERON:0006601!1.14e-07!102;UBERON:0003080!8.02e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.90e-13,64;UBERON:0003075,3.90e-13,64;UBERON:0007284,3.90e-13,64;UBERON:0001017,7.83e-12,73;UBERON:0000073,1.48e-11,54;UBERON:0001016,2.20e-11,75;UBERON:0010371,3.05e-11,73;UBERON:0001049,1.45e-10,52;UBERON:0005068,1.45e-10,52;UBERON:0006241,1.45e-10,52;UBERON:0007135,1.45e-10,52;UBERON:0004121,1.85e-10,95;UBERON:0000924,1.85e-10,95;UBERON:0006601,1.85e-10,95;UBERON:0003056,3.71e-09,49;UBERON:0002020,1.15e-08,34;UBERON:0000955,1.94e-08,47;UBERON:0006238,1.94e-08,47;UBERON:0002021,2.59e-08,10;UBERON:0000411,2.59e-08,10;UBERON:0001950,2.59e-08,10;UBERON:0002616,5.79e-08,46;UBERON:0010314,1.36e-07,92;UBERON:0003080,1.43e-07,40;UBERON:0002780,4.41e-07,39;UBERON:0001890,4.41e-07,39;UBERON:0006240,4.41e-07,39|phase1_expression=2.7225304007815,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0.903863264091034,1.54867594366833,3.27690336850791,0.68487187290202,0.398860794976682,0.856003649656029,0.262261207256992,0.333109761815663,1.01237633694913,0,0.630924330716475,0.685572168028694,0.84877930359606,5.01755411891312,1.29078236561151,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0,0,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.377690453926732,0.709638518536602,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0,0,1.00669563634642,0,1.68046899571232,0.771778308107841,1.14613375975503,2.06268836910977,0.404632921719196,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.768436610643109,2.07379224616955,0.810035629990144,1.26194976810829,2.28520787523043,2.87129103237098,1.95985278743926,0.766763768145891,0,3.30347642998166,3.95830748064082,4.45458946443106,0.923204014111357,0.548925861614458,0,3.07101298901519,4.50210088025344,5.34793867218835,6.48182888042069,5.12538050876771,2.42319279572891,0.984440513331393,1.43585964202892,0.579728977403356,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.842666520790511,1.53387290320252,1.29893002301434,0.35333957451034,1.83096445709685,2.56652954828636,2.54805239706646,0,0.432982082022428,1.01343946190039,0,0.79928715803342,0.517875767294343,0.742210695324124,0.346970653532272,0,0.691846491768175,0.452167921657868,2.11659672844269,1.0053327306374,0.741584903203122,0.722996784599558,1.76922110389975,0.647067399789637,0.220841518460394,0.484875253135222,0,1.46390398505774,3.14170060220183,0.255457055208591,1.7972268675888,1.19980546198682,1.52484272487678,5.99162557619291,4.11750542536764,8.67015029578764,7.30062144807561,10.7400492078739,3.53239675751252,6.00292673350703,1.62942982160506,0.870848794270651,1.76905930903572,0.420883711772948,3.6433724029557,2.98872735763515,2.34080768746954,1.65775299619287,2.17716797284249,3.58718416797579,1.96773621575431,1.03481348295606,0.431135985865684,3.40390944302075,1.75951124163949,1.7535658594206,0.834141747676794,0.696504333044333,1.64625709126355,2.18937693500343,2.1066395619397,0.772043721344145,2.27330799516474,0.828503090142008,1.17263029990548,1.80062061461015,1.42046841351126,1.37734962223183,0.617068451549513,1.39520366850245,0.804820204198858,0.934122738937356,0.658239399653922,1.14917224855367,0.648550476366846,0.584799949701329,1.09775057645525,0.268412837520744,8.83217783969334,11.216602749342,0,0,2.13288250535234,3.0190767341857,1.80414445850931,0.605050573870028,0.667134131534611,0.951128130562796,0,0.823494773620054,0,0.795825888164603,0.974820435595601,0,0.432276099749388,0.398282546508734,0.379335801906163,1.25673363870702,0,0.814605311381257,1.35766741017338,1.68325967736765,1.64414996523069,0.147610147979602,0.941992367048249,0.493588655687202,0,0.333690211432188,1.76903095601883,1.12431056192427,0.405720242777006,1.20588579876208,1.01850340712568,0.575392274901621,1.29708181420028,1.64736847912849,1.43768206527355,0.744281895337007,2.18426371180192,1.76805214562978,0.896987067609561,0.964887042726734,0.369506380333209,1.70542270593436,2.28150967018836,2.20668611507745,1.17345124144251,1.84256883185997,0.476087281772027,1.17080188714679,2.04925687338048,1.7717175171902,2.23236676120482,0.327726629431476,0.518054945597687,0.723245292907558,0,0.54390568381871,0,1.65562047782839,6.10092241953609,4.45404409050372,0.983609672260053,0,1.57754109708128,2.34263246577983,2.36965737506079,0.477937595905104,2.00518806674155,0.566153061577665,2.42886421004937,2.33804686329049,2.76701444562566,4.81981974632711,1.13552068166615,0.178065603667255,1.79175655288934,0.659880491890142,0,2.18502572539483,1.51161778482376,0.565815239267694,0.885905678642318,1.53717573971964,1.29214146584111,1.45413491791002,1.06949213515416,1.26414703174326,0,1.03135543248187,1.36175842301515,1.98067203434441,0.388076051348264,2.35770738534752,1.77340233642274,1.24858172321449,1.64549020602121,0.304464949114599,0.938686832254841,0.63549621259146,0.441056796109924,0.65954501176592,0.322928853391811,1.26657142349127,0.716234064018819,0.328281799490123,0.291480836629851,3.70850604021019,0.341741761595705,1.23832120777933,1.29636169158798,0.753473828018764,1.0935538217682,0,1.5298058699447,2.6590775941495,1.52019971184866,0,2.21435195506795,1.42323626988794,0.756037385752609,0.836353184057875,1.31017538247707,1.07891477107857,0.909188012978695,1.83229159388821,0.259229946583586,1.24267862617385,22.5477175473676,2.39226473670366,0.66183396182839,2.13896307178452,1.42075805825504,1.85851738039856,2.11243029562357,1.5624526181274,2.51662426621706,11.1128695579963,10.9451402377989,1.26404448251271,1.01362607645082,2.05421914329655,1.94881234466693,2.32734704367726,1.58945083825012,1.44234539423963,1.47689527174577,2.01932899896295,2.209997392995,2.31900225814733,1.46186821109629,1.25075394132428,1.63627663054197,0.453460767230423,0.221985953374065,0.62799699626633,0.167884616364078,0.965947970160952,0.563047426353546,0.73260649706906,0.643105137237198,1.00314420807073,11.2950368523413,8.74617949363636,9.16632821503035,8.248952752497,8.22099023724771,7.55393897389701,8.10027000278167,4.95353323546643,7.70342095273148,6.21312374102184,3.42498247027783,3.19219898720825,3.24393850932855,1.21553358534147,3.77303692730368,1.2869045591501,0.888986911206461,2.47242068686673,2.56735367673452,1.76888048234658,1.01391719956096,1.32038438970253,1.40462261204824,1.92075457214608,1.66562859971278,3.81034953026459,1.15884325944855,1.35036454324594,1.23625770240992,1.61918812147837,2.05721551431249,1.77475806159337,2.62279808942053,1.59881058295561,1.69396884747595,2.28459441307527,1.46342378298218,0.789209134313529,1.22223702461276,1.12228454331548,2.49133538060766,1.97008964751127,1.22769312950907,1.54936841185966,1.92906610981141,1.24905288968973,2.33931608445408,1.28922632428979,1.53030665655075,1.32354851471709,2.08681052058379|short_description=p@chr18:35722088..35722144,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:35722088..35722144,+ | |||
|description=CAGE_peak_at_chr18:35722088..35722144,+ | |||
|id=chr18:35722088..35722144,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!7.45e-11!86;UBERON:0000153!1.83e-10!94;UBERON:0000033!4.72e-10!63;UBERON:0001017!5.77e-10!73;UBERON:0005743!5.77e-10!73;UBERON:0000073!7.49e-10!75;UBERON:0001016!7.49e-10!75;UBERON:0002346!2.57e-09!71;UBERON:0003075!2.57e-09!71;UBERON:0007284!2.57e-09!71;UBERON:0001049!3.55e-09!52;UBERON:0005068!3.55e-09!52;UBERON:0006241!3.55e-09!52;UBERON:0007135!3.55e-09!52;UBERON:0000955!1.59e-08!50;UBERON:0006238!1.59e-08!50;UBERON:0003056!3.00e-08!49;UBERON:0002616!4.42e-08!49;UBERON:0002020!6.25e-08!34;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0004121!1.14e-07!102;UBERON:0000924!1.14e-07!102;UBERON:0006601!1.14e-07!102;UBERON:0003080!8.02e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.90e-13,64;UBERON:0003075,3.90e-13,64;UBERON:0007284,3.90e-13,64;UBERON:0001017,7.83e-12,73;UBERON:0000073,1.48e-11,54;UBERON:0001016,2.20e-11,75;UBERON:0010371,3.05e-11,73;UBERON:0001049,1.45e-10,52;UBERON:0005068,1.45e-10,52;UBERON:0006241,1.45e-10,52;UBERON:0007135,1.45e-10,52;UBERON:0004121,1.85e-10,95;UBERON:0000924,1.85e-10,95;UBERON:0006601,1.85e-10,95;UBERON:0003056,3.71e-09,49;UBERON:0002020,1.15e-08,34;UBERON:0000955,1.94e-08,47;UBERON:0006238,1.94e-08,47;UBERON:0002021,2.59e-08,10;UBERON:0000411,2.59e-08,10;UBERON:0001950,2.59e-08,10;UBERON:0002616,5.79e-08,46;UBERON:0010314,1.36e-07,92;UBERON:0003080,1.43e-07,40;UBERON:0002780,4.41e-07,39;UBERON:0001890,4.41e-07,39;UBERON:0006240,4.41e-07,39 | |||
|phase1_expression=2.7225304007815,0,0.454999239389536,0.30246421130683,0,0.33575854382378,0.233612640595526,0.903863264091034,1.54867594366833,3.27690336850791,0.68487187290202,0.398860794976682,0.856003649656029,0.262261207256992,0.333109761815663,1.01237633694913,0,0.630924330716475,0.685572168028694,0.84877930359606,5.01755411891312,1.29078236561151,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0,0,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0.288851619751275,0.332469290716985,1.02084678131185,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0.485510353031154,0.377690453926732,0.709638518536602,0.367093504323363,0,0.218025156380447,0,0.194429899074283,0,0,1.00669563634642,0,1.68046899571232,0.771778308107841,1.14613375975503,2.06268836910977,0.404632921719196,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.768436610643109,2.07379224616955,0.810035629990144,1.26194976810829,2.28520787523043,2.87129103237098,1.95985278743926,0.766763768145891,0,3.30347642998166,3.95830748064082,4.45458946443106,0.923204014111357,0.548925861614458,0,3.07101298901519,4.50210088025344,5.34793867218835,6.48182888042069,5.12538050876771,2.42319279572891,0.984440513331393,1.43585964202892,0.579728977403356,0,0.679971333707751,0.539703191637817,0.649776417447669,0,0.842666520790511,1.53387290320252,1.29893002301434,0.35333957451034,1.83096445709685,2.56652954828636,2.54805239706646,0,0.432982082022428,1.01343946190039,0,0.79928715803342,0.517875767294343,0.742210695324124,0.346970653532272,0,0.691846491768175,0.452167921657868,2.11659672844269,1.0053327306374,0.741584903203122,0.722996784599558,1.76922110389975,0.647067399789637,0.220841518460394,0.484875253135222,0,1.46390398505774,3.14170060220183,0.255457055208591,1.7972268675888,1.19980546198682,1.52484272487678,5.99162557619291,4.11750542536764,8.67015029578764,7.30062144807561,10.7400492078739,3.53239675751252,6.00292673350703,1.62942982160506,0.870848794270651,1.76905930903572,0.420883711772948,3.6433724029557,2.98872735763515,2.34080768746954,1.65775299619287,2.17716797284249,3.58718416797579,1.96773621575431,1.03481348295606,0.431135985865684,3.40390944302075,1.75951124163949,1.7535658594206,0.834141747676794,0.696504333044333,1.64625709126355,2.18937693500343,2.1066395619397,0.772043721344145,2.27330799516474,0.828503090142008,1.17263029990548,1.80062061461015,1.42046841351126,1.37734962223183,0.617068451549513,1.39520366850245,0.804820204198858,0.934122738937356,0.658239399653922,1.14917224855367,0.648550476366846,0.584799949701329,1.09775057645525,0.268412837520744,8.83217783969334,11.216602749342,0,0,2.13288250535234,3.0190767341857,1.80414445850931,0.605050573870028,0.667134131534611,0.951128130562796,0,0.823494773620054,0,0.795825888164603,0.974820435595601,0,0.432276099749388,0.398282546508734,0.379335801906163,1.25673363870702,0,0.814605311381257,1.35766741017338,1.68325967736765,1.64414996523069,0.147610147979602,0.941992367048249,0.493588655687202,0,0.333690211432188,1.76903095601883,1.12431056192427,0.405720242777006,1.20588579876208,1.01850340712568,0.575392274901621,1.29708181420028,1.64736847912849,1.43768206527355,0.744281895337007,2.18426371180192,1.76805214562978,0.896987067609561,0.964887042726734,0.369506380333209,1.70542270593436,2.28150967018836,2.20668611507745,1.17345124144251,1.84256883185997,0.476087281772027,1.17080188714679,2.04925687338048,1.7717175171902,2.23236676120482,0.327726629431476,0.518054945597687,0.723245292907558,0,0.54390568381871,0,1.65562047782839,6.10092241953609,4.45404409050372,0.983609672260053,0,1.57754109708128,2.34263246577983,2.36965737506079,0.477937595905104,2.00518806674155,0.566153061577665,2.42886421004937,2.33804686329049,2.76701444562566,4.81981974632711,1.13552068166615,0.178065603667255,1.79175655288934,0.659880491890142,0,2.18502572539483,1.51161778482376,0.565815239267694,0.885905678642318,1.53717573971964,1.29214146584111,1.45413491791002,1.06949213515416,1.26414703174326,0,1.03135543248187,1.36175842301515,1.98067203434441,0.388076051348264,2.35770738534752,1.77340233642274,1.24858172321449,1.64549020602121,0.304464949114599,0.938686832254841,0.63549621259146,0.441056796109924,0.65954501176592,0.322928853391811,1.26657142349127,0.716234064018819,0.328281799490123,0.291480836629851,3.70850604021019,0.341741761595705,1.23832120777933,1.29636169158798,0.753473828018764,1.0935538217682,0,1.5298058699447,2.6590775941495,1.52019971184866,0,2.21435195506795,1.42323626988794,0.756037385752609,0.836353184057875,1.31017538247707,1.07891477107857,0.909188012978695,1.83229159388821,0.259229946583586,1.24267862617385,22.5477175473676,2.39226473670366,0.66183396182839,2.13896307178452,1.42075805825504,1.85851738039856,2.11243029562357,1.5624526181274,2.51662426621706,11.1128695579963,10.9451402377989,1.26404448251271,1.01362607645082,2.05421914329655,1.94881234466693,2.32734704367726,1.58945083825012,1.44234539423963,1.47689527174577,2.01932899896295,2.209997392995,2.31900225814733,1.46186821109629,1.25075394132428,1.63627663054197,0.453460767230423,0.221985953374065,0.62799699626633,0.167884616364078,0.965947970160952,0.563047426353546,0.73260649706906,0.643105137237198,1.00314420807073,11.2950368523413,8.74617949363636,9.16632821503035,8.248952752497,8.22099023724771,7.55393897389701,8.10027000278167,4.95353323546643,7.70342095273148,6.21312374102184,3.42498247027783,3.19219898720825,3.24393850932855,1.21553358534147,3.77303692730368,1.2869045591501,0.888986911206461,2.47242068686673,2.56735367673452,1.76888048234658,1.01391719956096,1.32038438970253,1.40462261204824,1.92075457214608,1.66562859971278,3.81034953026459,1.15884325944855,1.35036454324594,1.23625770240992,1.61918812147837,2.05721551431249,1.77475806159337,2.62279808942053,1.59881058295561,1.69396884747595,2.28459441307527,1.46342378298218,0.789209134313529,1.22223702461276,1.12228454331548,2.49133538060766,1.97008964751127,1.22769312950907,1.54936841185966,1.92906610981141,1.24905288968973,2.33931608445408,1.28922632428979,1.53030665655075,1.32354851471709,2.08681052058379 | |||
|short_description=p@chr18:35722088..35722144,+ | |||
}} |
Latest revision as of 16:38, 5 August 2015
Short description: | p@chr18:35722088..35722144, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:35722088..35722144, + |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.90e-13 | 64 |
neural plate | 3.90e-13 | 64 |
presumptive neural plate | 3.90e-13 | 64 |
central nervous system | 7.83e-12 | 73 |
regional part of nervous system | 1.48e-11 | 54 |
nervous system | 2.20e-11 | 75 |
ecto-epithelium | 3.05e-11 | 73 |
neural tube | 1.45e-10 | 52 |
neural rod | 1.45e-10 | 52 |
future spinal cord | 1.45e-10 | 52 |
neural keel | 1.45e-10 | 52 |
ectoderm-derived structure | 1.85e-10 | 95 |
ectoderm | 1.85e-10 | 95 |
presumptive ectoderm | 1.85e-10 | 95 |
pre-chordal neural plate | 3.71e-09 | 49 |
gray matter | 1.15e-08 | 34 |
brain | 1.94e-08 | 47 |
future brain | 1.94e-08 | 47 |
occipital lobe | 2.59e-08 | 10 |
visual cortex | 2.59e-08 | 10 |
neocortex | 2.59e-08 | 10 |
regional part of brain | 5.79e-08 | 46 |
structure with developmental contribution from neural crest | 1.36e-07 | 92 |
anterior neural tube | 1.43e-07 | 40 |
regional part of forebrain | 4.41e-07 | 39 |
forebrain | 4.41e-07 | 39 |
future forebrain | 4.41e-07 | 39 |