FFCP PHASE1:Mm9::chr1:129574322..129574375,-: Difference between revisions
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{{FFCP|EntrezGene=72160|HGNC=|MCL_coexpression_id=39|UniProt=Q8C996|association_with_transcript=222bp_to_NM_028135,uc007cku.1,uc011wqz.1_5end|description=CAGE_peak_1_at_Tmem163_5end|id=chr1:129574322..129574375,-|ontology_enrichment_celltype=CL:0000117!3.37e-10!23;CL:0000337!3.37e-10!23|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-11,23;CL:0000337,9.16e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.89e-17!52;UBERON:0005068!1.89e-17!52;UBERON:0006241!1.89e-17!52;UBERON:0007135!1.89e-17!52;UBERON:0000955!2.01e-16!50;UBERON:0006238!2.01e-16!50;UBERON:0000033!2.98e-16!63;UBERON:0002616!9.08e-16!49;UBERON:0000025!3.02e-15!114;UBERON:0001017!7.39e-14!73;UBERON:0005743!7.39e-14!73;UBERON:0004111!9.28e-14!122;UBERON:0000073!2.82e-13!75;UBERON:0001016!2.82e-13!75;UBERON:0002346!8.89e-13!71;UBERON:0003075!8.89e-13!71;UBERON:0007284!8.89e-13!71;UBERON:0002020!1.49e-12!34;UBERON:0003056!1.93e-12!49;UBERON:0003080!3.63e-12!40;UBERON:0002780!1.47e-11!39;UBERON:0001890!1.47e-11!39;UBERON:0006240!1.47e-11!39;UBERON:0004121!1.61e-10!102;UBERON:0000924!1.61e-10!102;UBERON:0006601!1.61e-10!102;UBERON:0002791!9.64e-10!29;UBERON:0003528!9.64e-10!29;UBERON:0001893!9.64e-10!29;UBERON:0000477!9.09e-09!154;UBERON:0007811!4.53e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.42e-19,54;UBERON:0001049,3.67e-18,52;UBERON:0005068,3.67e-18,52;UBERON:0006241,3.67e-18,52;UBERON:0007135,3.67e-18,52;UBERON:0010314,2.37e-17,92;UBERON:0002346,3.07e-16,64;UBERON:0003075,3.07e-16,64;UBERON:0007284,3.07e-16,64;UBERON:0000025,7.41e-16,114;UBERON:0000955,3.94e-15,47;UBERON:0006238,3.94e-15,47;UBERON:0001017,4.02e-15,73;UBERON:0002616,1.84e-14,46;UBERON:0001016,2.20e-14,75;UBERON:0004111,5.25e-14,122;UBERON:0002020,2.84e-13,34;UBERON:0003056,3.75e-13,49;UBERON:0010371,6.60e-13,73;UBERON:0003080,7.34e-13,40;UBERON:0004121,2.54e-12,95;UBERON:0000924,2.54e-12,95;UBERON:0006601,2.54e-12,95;UBERON:0002780,3.26e-12,39;UBERON:0001890,3.26e-12,39;UBERON:0006240,3.26e-12,39;UBERON:0003528,2.81e-10,29;UBERON:0002791,2.81e-10,29;UBERON:0001893,2.81e-10,29;UBERON:0000956,8.93e-07,21;UBERON:0001869,8.93e-07,21;UBERON:0000203,8.93e-07,21|phase1_expression=1.76163731815273,0,0,0,0,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,14.6568295198892,13.1608923803387,2.79824751251259,69.2439452961332,83.2284611986834,75.1169683682513,13.7770130044733,0,0,2.07990149631429,4.35877634027623,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,2.54012269383853,3.07532393792285,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0,0,0,0.782391344348039,2.61630187656536,7.46933021297204,2.52758868796568,0.419959264876088,0,69.9653467260761,3.62681071005672,2.68875039313971,0,0.286533439938757,14.9544906760458,37.4285452590256,48.667170093027,45.0020296489387,4.06613438482959,3.55717918444456,0,0,0,21.8708080678435,26.5110630671873,5.08079100311541,5.94026128659439,5.04779907243317,89.9800600871981,75.3161724645002,3.55223317723367,3.73797336971122,3.67687514644008,67.1706874096271,59.6299868857827,59.29212183691,41.0166354840903,31.6547246864337,33.8593690861894,47.4611098302348,60.2155992733898,56.2297551818661,50.9707452869445,44.4199644093201,34.6702969235059,0.37863096666592,2.04043212288321,0.289864488701678,0.860423876981386,0.679971333707751,0,0,0,6.88177658645584,0,0,0,2.39433813620357,0,0,0,1.5154372870785,0.760079596425296,1.01104889002957,4.68153906848146,34.1798006414267,2.3750742250372,0.346970653532272,0.304465478312141,0.922461989024234,0.904335843315735,1.05829836422134,0.502666365318702,0.494389935468748,3.18118585223806,9.73071607144862,1.13236794963186,11.9254419968613,7.27312879702833,1.86391761218122,129.116331482092,180.333614566385,1.27728527604296,0.11981512450592,0,0.127070227073065,70.102019241457,26.0775343606617,4.27224797183739,21.9018643442268,32.7315785382823,62.1286253233085,65.8699528055096,0.101839363850316,9.45492976636707,0,3.99839526184301,1.56144531555244,4.36813998423599,3.24111833649629,3.61691562805716,4.76255494059295,4.86832137082429,6.27801554550183,18.3679393224701,0.646703978798527,1.70195472151037,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0,0,0,0.284163499395593,40.5966514169584,34.4753308172211,24.8485644816201,21.7805156738393,12.9864392953287,17.2779166433864,11.6266972375204,16.6329508867764,15.6465558772007,36.8614063806196,26.1026267885761,20.5104088151015,31.1405973215958,33.8107177548218,28.8543800334799,11.1453672738987,12.2456488731348,0,0.793351699990633,0,0.232236671860439,0.128867461322093,0.403367049246685,0.667134131534611,0.760902504450237,0,0.494096864172033,1.25667604400135,1.79060824837036,0.779856348476481,1.79763881730844,1.29682829924817,0.597423819763102,0.379335801906163,0.228497025219458,1.1270773567308,0.814605311381257,1.16371492300575,0.561086559122548,2.97211724484009,3.24742325555125,3.1399745568275,3.20832626196681,0.296452627087149,1.50160595144485,1.375912965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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72160 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C996 | |||
|association_with_transcript=222bp_to_NM_028135,uc007cku.1,uc011wqz.1_5end | |||
|cluster_id=chr1:129574322..129574375,- | |||
|description=CAGE_peak_1_at_Tmem163_5end | |||
|id=chr1:129574322..129574375,- | |||
|ontology_enrichment_celltype=CL:0000117!3.37e-10!23;CL:0000337!3.37e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.16e-11,23;CL:0000337,9.16e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-17!52;UBERON:0005068!1.89e-17!52;UBERON:0006241!1.89e-17!52;UBERON:0007135!1.89e-17!52;UBERON:0000955!2.01e-16!50;UBERON:0006238!2.01e-16!50;UBERON:0000033!2.98e-16!63;UBERON:0002616!9.08e-16!49;UBERON:0000025!3.02e-15!114;UBERON:0001017!7.39e-14!73;UBERON:0005743!7.39e-14!73;UBERON:0004111!9.28e-14!122;UBERON:0000073!2.82e-13!75;UBERON:0001016!2.82e-13!75;UBERON:0002346!8.89e-13!71;UBERON:0003075!8.89e-13!71;UBERON:0007284!8.89e-13!71;UBERON:0002020!1.49e-12!34;UBERON:0003056!1.93e-12!49;UBERON:0003080!3.63e-12!40;UBERON:0002780!1.47e-11!39;UBERON:0001890!1.47e-11!39;UBERON:0006240!1.47e-11!39;UBERON:0004121!1.61e-10!102;UBERON:0000924!1.61e-10!102;UBERON:0006601!1.61e-10!102;UBERON:0002791!9.64e-10!29;UBERON:0003528!9.64e-10!29;UBERON:0001893!9.64e-10!29;UBERON:0000477!9.09e-09!154;UBERON:0007811!4.53e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.42e-19,54;UBERON:0001049,3.67e-18,52;UBERON:0005068,3.67e-18,52;UBERON:0006241,3.67e-18,52;UBERON:0007135,3.67e-18,52;UBERON:0010314,2.37e-17,92;UBERON:0002346,3.07e-16,64;UBERON:0003075,3.07e-16,64;UBERON:0007284,3.07e-16,64;UBERON:0000025,7.41e-16,114;UBERON:0000955,3.94e-15,47;UBERON:0006238,3.94e-15,47;UBERON:0001017,4.02e-15,73;UBERON:0002616,1.84e-14,46;UBERON:0001016,2.20e-14,75;UBERON:0004111,5.25e-14,122;UBERON:0002020,2.84e-13,34;UBERON:0003056,3.75e-13,49;UBERON:0010371,6.60e-13,73;UBERON:0003080,7.34e-13,40;UBERON:0004121,2.54e-12,95;UBERON:0000924,2.54e-12,95;UBERON:0006601,2.54e-12,95;UBERON:0002780,3.26e-12,39;UBERON:0001890,3.26e-12,39;UBERON:0006240,3.26e-12,39;UBERON:0003528,2.81e-10,29;UBERON:0002791,2.81e-10,29;UBERON:0001893,2.81e-10,29;UBERON:0000956,8.93e-07,21;UBERON:0001869,8.93e-07,21;UBERON:0000203,8.93e-07,21 | |||
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| |||
|short_description=p1@Tmem163 | |||
}} |
Latest revision as of 07:18, 26 September 2015
Short description: | p1@Tmem163 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tmem163_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 222bp_to_NM_028135, uc007cku.1, uc011wqz.1_5end |
EntrezGene: | Tmem163 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.16e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.16e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.42e-19 | 54 |
neural tube | 3.67e-18 | 52 |
neural rod | 3.67e-18 | 52 |
future spinal cord | 3.67e-18 | 52 |
neural keel | 3.67e-18 | 52 |
structure with developmental contribution from neural crest | 2.37e-17 | 92 |
neurectoderm | 3.07e-16 | 64 |
neural plate | 3.07e-16 | 64 |
presumptive neural plate | 3.07e-16 | 64 |
tube | 7.41e-16 | 114 |
brain | 3.94e-15 | 47 |
future brain | 3.94e-15 | 47 |
central nervous system | 4.02e-15 | 73 |
regional part of brain | 1.84e-14 | 46 |
nervous system | 2.20e-14 | 75 |
anatomical conduit | 5.25e-14 | 122 |
gray matter | 2.84e-13 | 34 |
pre-chordal neural plate | 3.75e-13 | 49 |
ecto-epithelium | 6.60e-13 | 73 |
anterior neural tube | 7.34e-13 | 40 |
ectoderm-derived structure | 2.54e-12 | 95 |
ectoderm | 2.54e-12 | 95 |
presumptive ectoderm | 2.54e-12 | 95 |
regional part of forebrain | 3.26e-12 | 39 |
forebrain | 3.26e-12 | 39 |
future forebrain | 3.26e-12 | 39 |
brain grey matter | 2.81e-10 | 29 |
regional part of telencephalon | 2.81e-10 | 29 |
telencephalon | 2.81e-10 | 29 |
cerebral cortex | 8.93e-07 | 21 |
cerebral hemisphere | 8.93e-07 | 21 |
pallium | 8.93e-07 | 21 |