FFCP PHASE1:Mm9::chr1:36996339..36996348,-: Difference between revisions
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{{FFCP|EntrezGene=56030|HGNC=|MCL_coexpression_id=910|UniProt=O70472,Q9CSR0|association_with_transcript=23bp_to_ENSMUST00000027290,NM_018872,uc007ard.1_5end|description=CAGE_peak_5_at_Tmem131_5end|id=chr1:36996339..36996348,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,7.91e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.82e-10!50;UBERON:0006238!2.82e-10!50;UBERON:0000033!3.03e-10!63;UBERON:0007811!3.22e-10!86;UBERON:0002616!1.13e-09!49;UBERON:0001049!2.83e-09!52;UBERON:0005068!2.83e-09!52;UBERON:0006241!2.83e-09!52;UBERON:0007135!2.83e-09!52;UBERON:0000153!5.91e-09!94;UBERON:0002021!1.03e-08!10;UBERON:0000411!1.03e-08!10;UBERON:0001950!1.03e-08!10;UBERON:0004121!1.70e-08!102;UBERON:0000924!1.70e-08!102;UBERON:0006601!1.70e-08!102;UBERON:0001017!2.40e-08!73;UBERON:0005743!2.40e-08!73;UBERON:0000073!1.19e-07!75;UBERON:0001016!1.19e-07!75;UBERON:0002020!6.07e-07!34;UBERON:0003080!7.18e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.35e-31,10;UBERON:0000411,4.35e-31,10;UBERON:0001950,4.35e-31,10;UBERON:0002619,8.77e-22,17;UBERON:0000956,4.58e-21,21;UBERON:0001869,4.58e-21,21;UBERON:0000203,4.58e-21,21;UBERON:0000073,8.08e-18,54;UBERON:0000955,3.80e-16,47;UBERON:0006238,3.80e-16,47;UBERON:0002780,9.31e-15,39;UBERON:0001890,9.31e-15,39;UBERON:0006240,9.31e-15,39;UBERON:0003528,9.74e-15,29;UBERON:0002791,9.74e-15,29;UBERON:0001893,9.74e-15,29;UBERON:0003080,2.49e-14,40;UBERON:0001017,3.37e-14,73;UBERON:0002616,3.44e-14,46;UBERON:0001016,9.81e-14,75;UBERON:0002020,2.71e-12,34;UBERON:0001049,2.92e-12,52;UBERON:0005068,2.92e-12,52;UBERON:0006241,2.92e-12,52;UBERON:0007135,2.92e-12,52;UBERON:0004684,7.91e-12,3;UBERON:0002275,7.91e-12,3;UBERON:0003056,2.86e-11,49;UBERON:0004121,3.64e-10,95;UBERON:0000924,3.64e-10,95;UBERON:0006601,3.64e-10,95;UBERON:0002346,1.74e-09,64;UBERON:0003075,1.74e-09,64;UBERON:0007284,1.74e-09,64;UBERON:0010371,5.27e-08,73|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,4.50523910885334,5.61754863172784,0.856089841127525,0.797721589953364,0,0.0874204024189974,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0,0.425216450755349,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,2.042997409363,1.0752457327937,0.395658863190582,0.274462930807229,0,0,0.56276261003168,0.61119299110724,0.883885756421003,0.427115042397309,0,0,0,0,0,0,0,0,0.448026887097336,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0.247194967734374,0,0,0.647067399789637,0.220841518460394,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.599162557619291,0.457500602818626,0.628271760564322,1.91206752211504,1.79000820131231,1.0389402227978,1.62241263067758,0.611036183101898,0,0.758168275301024,0,0.260240885925407,0,0,0,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0.213288250535234,0.696710015581316,0,0,0.22237804384487,0,0,0.494096864172033,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.0632365371242573,0,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0.668396022247182,0.283076530788832,0,0,0.395287777946524,2.57057053137446,0.425820255624806,0.534196811001766,0.977321756121456,0.494910368917606,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0.720244376125241,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0.49465875882444,0.807322133479528,0.361877549568935,0.238744688006273,0.492422699235184,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0.376736914009382,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.523511883968059,0.129614973291793,0.621339313086926,0,0.149516546043979,0,1.36115831840833,0.516639293910924,0,0.117357238645754,0.2604087696879,0.629156066554265,0.724752362478018,0.576060012515731,0.316011120628178,0.608175645870493,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56030 | |||
|HGNC= | |||
|MCL_coexpression_id=910 | |||
|TSSclassifier=NA | |||
|UniProt=O70472,Q9CSR0 | |||
|association_with_transcript=23bp_to_ENSMUST00000027290,NM_018872,uc007ard.1_5end | |||
|cluster_id=chr1:36996339..36996348,- | |||
|description=CAGE_peak_5_at_Tmem131_5end | |||
|id=chr1:36996339..36996348,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,7.91e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.82e-10!50;UBERON:0006238!2.82e-10!50;UBERON:0000033!3.03e-10!63;UBERON:0007811!3.22e-10!86;UBERON:0002616!1.13e-09!49;UBERON:0001049!2.83e-09!52;UBERON:0005068!2.83e-09!52;UBERON:0006241!2.83e-09!52;UBERON:0007135!2.83e-09!52;UBERON:0000153!5.91e-09!94;UBERON:0002021!1.03e-08!10;UBERON:0000411!1.03e-08!10;UBERON:0001950!1.03e-08!10;UBERON:0004121!1.70e-08!102;UBERON:0000924!1.70e-08!102;UBERON:0006601!1.70e-08!102;UBERON:0001017!2.40e-08!73;UBERON:0005743!2.40e-08!73;UBERON:0000073!1.19e-07!75;UBERON:0001016!1.19e-07!75;UBERON:0002020!6.07e-07!34;UBERON:0003080!7.18e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.35e-31,10;UBERON:0000411,4.35e-31,10;UBERON:0001950,4.35e-31,10;UBERON:0002619,8.77e-22,17;UBERON:0000956,4.58e-21,21;UBERON:0001869,4.58e-21,21;UBERON:0000203,4.58e-21,21;UBERON:0000073,8.08e-18,54;UBERON:0000955,3.80e-16,47;UBERON:0006238,3.80e-16,47;UBERON:0002780,9.31e-15,39;UBERON:0001890,9.31e-15,39;UBERON:0006240,9.31e-15,39;UBERON:0003528,9.74e-15,29;UBERON:0002791,9.74e-15,29;UBERON:0001893,9.74e-15,29;UBERON:0003080,2.49e-14,40;UBERON:0001017,3.37e-14,73;UBERON:0002616,3.44e-14,46;UBERON:0001016,9.81e-14,75;UBERON:0002020,2.71e-12,34;UBERON:0001049,2.92e-12,52;UBERON:0005068,2.92e-12,52;UBERON:0006241,2.92e-12,52;UBERON:0007135,2.92e-12,52;UBERON:0004684,7.91e-12,3;UBERON:0002275,7.91e-12,3;UBERON:0003056,2.86e-11,49;UBERON:0004121,3.64e-10,95;UBERON:0000924,3.64e-10,95;UBERON:0006601,3.64e-10,95;UBERON:0002346,1.74e-09,64;UBERON:0003075,1.74e-09,64;UBERON:0007284,1.74e-09,64;UBERON:0010371,5.27e-08,73 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,4.50523910885334,5.61754863172784,0.856089841127525,0.797721589953364,0,0.0874204024189974,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0,0.425216450755349,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.441737081903227,0,0,0,1.10115880999389,2.042997409363,1.0752457327937,0.395658863190582,0.274462930807229,0,0,0.56276261003168,0.61119299110724,0.883885756421003,0.427115042397309,0,0,0,0,0,0,0,0,0.448026887097336,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.346970653532272,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0.247194967734374,0,0,0.647067399789637,0.220841518460394,0,0,1.17112318804619,0.83778682725382,0,0,0,0,0.599162557619291,0.457500602818626,0.628271760564322,1.91206752211504,1.79000820131231,1.0389402227978,1.62241263067758,0.611036183101898,0,0.758168275301024,0,0.260240885925407,0,0,0,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0.213288250535234,0.696710015581316,0,0,0.22237804384487,0,0,0.494096864172033,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.0632365371242573,0,0.156998727841375,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0.668396022247182,0.283076530788832,0,0,0.395287777946524,2.57057053137446,0.425820255624806,0.534196811001766,0.977321756121456,0.494910368917606,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0,0.316036757935816,1.05418608574999,0,0.680879211507576,0.720244376125241,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0.49465875882444,0.807322133479528,0.361877549568935,0.238744688006273,0.492422699235184,0,0.556275906031529,0,0.206386867963223,0.185194527369712,0.376736914009382,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.269728692769641,0.0826534557253359,0.523511883968059,0.129614973291793,0.621339313086926,0,0.149516546043979,0,1.36115831840833,0.516639293910924,0,0.117357238645754,0.2604087696879,0.629156066554265,0.724752362478018,0.576060012515731,0.316011120628178,0.608175645870493,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.350630706544707,0.453460767230423,0,0.0897138566094757,0,0,0.93841237725591,0.183151624267265,0.643105137237198,0.501572104035363,2.25900737046827,0.920650473014354,3.43737308063638,1.20297227640581,2.74033007908257,1.5107877947794,1.35004500046361,2.2516060161211,1.35942722695261,4.65984280576638,0.103787347584177,0.798049746802062,0.170733605754134,0,0,0.551530525350042,0,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.347652977834566,0.38581844092741,0.824171801606613,0,0,0.177475806159338,0,0.436039249896986,0.376437521661322,0.338458431566706,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.0985044823755635,0,0,0,0,0,0.214871054048298,0.382576664137687,0.441182838239031,0.463735671240843 | |||
|short_description=p5@Tmem131 | |||
}} |
Latest revision as of 02:30, 27 September 2015
Short description: | p5@Tmem131 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tmem131_5end |
Coexpression cluster: | MCL_coexpression_mm9:910 |
Association with transcript: | 23bp_to_ENSMUST00000027290, NM_018872, uc007ard.1_5end |
EntrezGene: | Tmem131 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 7.91e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.35e-31 | 10 |
visual cortex | 4.35e-31 | 10 |
neocortex | 4.35e-31 | 10 |
regional part of cerebral cortex | 8.77e-22 | 17 |
cerebral cortex | 4.58e-21 | 21 |
cerebral hemisphere | 4.58e-21 | 21 |
pallium | 4.58e-21 | 21 |
regional part of nervous system | 8.08e-18 | 54 |
brain | 3.80e-16 | 47 |
future brain | 3.80e-16 | 47 |
regional part of forebrain | 9.31e-15 | 39 |
forebrain | 9.31e-15 | 39 |
future forebrain | 9.31e-15 | 39 |
brain grey matter | 9.74e-15 | 29 |
regional part of telencephalon | 9.74e-15 | 29 |
telencephalon | 9.74e-15 | 29 |
anterior neural tube | 2.49e-14 | 40 |
central nervous system | 3.37e-14 | 73 |
regional part of brain | 3.44e-14 | 46 |
nervous system | 9.81e-14 | 75 |
gray matter | 2.71e-12 | 34 |
neural tube | 2.92e-12 | 52 |
neural rod | 2.92e-12 | 52 |
future spinal cord | 2.92e-12 | 52 |
neural keel | 2.92e-12 | 52 |
raphe nuclei | 7.91e-12 | 3 |
reticular formation | 7.91e-12 | 3 |
pre-chordal neural plate | 2.86e-11 | 49 |
ectoderm-derived structure | 3.64e-10 | 95 |
ectoderm | 3.64e-10 | 95 |
presumptive ectoderm | 3.64e-10 | 95 |
neurectoderm | 1.74e-09 | 64 |
neural plate | 1.74e-09 | 64 |
presumptive neural plate | 1.74e-09 | 64 |
ecto-epithelium | 5.27e-08 | 73 |