FFCP PHASE1:Mm9::chr1:6497916..6497919,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:6497916..6497919,+|id=chr1:6497916..6497919,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,1.09e-13,2;CL:0002614,3.51e-09,3;CL:0002194,2.76e-07,4;CL:0000766,2.76e-07,4;CL:0000234,2.76e-07,4;CL:0000576,2.76e-07,4;CL:0000235,2.76e-07,4;CL:0000864,2.76e-07,4;CL:0002009,2.76e-07,4;CL:0000040,2.76e-07,4;CL:0000559,2.76e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!1.85e-09!6;UBERON:0000955!2.03e-07!50;UBERON:0006238!2.03e-07!50;UBERON:0000033!2.43e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.09e-14,4;UBERON:0001891,1.09e-14,4;UBERON:0009616,1.09e-14,4;UBERON:0010286,1.09e-14,4;UBERON:0001896,5.25e-14,2;UBERON:0002298,5.25e-14,2;UBERON:0005290,5.25e-14,2;UBERON:0010096,5.25e-14,2;UBERON:0000955,2.22e-12,47;UBERON:0006238,2.22e-12,47;UBERON:0001017,3.53e-11,73;UBERON:0001049,3.85e-11,52;UBERON:0005068,3.85e-11,52;UBERON:0006241,3.85e-11,52;UBERON:0007135,3.85e-11,52;UBERON:0001016,7.64e-11,75;UBERON:0000073,1.39e-10,54;UBERON:0002616,3.25e-10,46;UBERON:0002038,3.51e-09,3;UBERON:0009663,3.51e-09,3;UBERON:0009661,3.51e-09,3;UBERON:0000125,3.51e-09,3;UBERON:0002308,3.51e-09,3;UBERON:0002346,7.77e-09,64;UBERON:0003075,7.77e-09,64;UBERON:0007284,7.77e-09,64;UBERON:0004121,2.92e-08,95;UBERON:0000924,2.92e-08,95;UBERON:0006601,2.92e-08,95;UBERON:0002259,9.86e-08,1;UBERON:0002314,9.86e-08,1;UBERON:0004061,9.86e-08,1;UBERON:0006777,9.86e-08,1;UBERON:0005882,9.86e-08,1;UBERON:0010371,1.34e-07,73;UBERON:0003080,3.84e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0.794327609607082,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0.837548997004143,1.12552522006336,1.5279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.485300549842228,0,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0,1.9472783122627,0.915001205637253,0,1.04294592115366,0.255715457330331,2.90903262383384,1.78465389374533,0,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.26173969138476,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,3.01582567878545,1.08781136763742,0,0,2.0871576698413,2.22702204525186,0,0,0,0,0,0.238968797952552,0,0,0,0,0,1.60660658210904,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.337912250981556,0,0.13020438484395,0,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:6497916..6497919,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:6497916..6497919,+ | |||
|description=CAGE_peak_at_chr1:6497916..6497919,+ | |||
|id=chr1:6497916..6497919,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.09e-13,2;CL:0002614,3.51e-09,3;CL:0002194,2.76e-07,4;CL:0000766,2.76e-07,4;CL:0000234,2.76e-07,4;CL:0000576,2.76e-07,4;CL:0000235,2.76e-07,4;CL:0000864,2.76e-07,4;CL:0002009,2.76e-07,4;CL:0000040,2.76e-07,4;CL:0000559,2.76e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!1.85e-09!6;UBERON:0000955!2.03e-07!50;UBERON:0006238!2.03e-07!50;UBERON:0000033!2.43e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002950,1.09e-14,4;UBERON:0001891,1.09e-14,4;UBERON:0009616,1.09e-14,4;UBERON:0010286,1.09e-14,4;UBERON:0001896,5.25e-14,2;UBERON:0002298,5.25e-14,2;UBERON:0005290,5.25e-14,2;UBERON:0010096,5.25e-14,2;UBERON:0000955,2.22e-12,47;UBERON:0006238,2.22e-12,47;UBERON:0001017,3.53e-11,73;UBERON:0001049,3.85e-11,52;UBERON:0005068,3.85e-11,52;UBERON:0006241,3.85e-11,52;UBERON:0007135,3.85e-11,52;UBERON:0001016,7.64e-11,75;UBERON:0000073,1.39e-10,54;UBERON:0002616,3.25e-10,46;UBERON:0002038,3.51e-09,3;UBERON:0009663,3.51e-09,3;UBERON:0009661,3.51e-09,3;UBERON:0000125,3.51e-09,3;UBERON:0002308,3.51e-09,3;UBERON:0002346,7.77e-09,64;UBERON:0003075,7.77e-09,64;UBERON:0007284,7.77e-09,64;UBERON:0004121,2.92e-08,95;UBERON:0000924,2.92e-08,95;UBERON:0006601,2.92e-08,95;UBERON:0002259,9.86e-08,1;UBERON:0002314,9.86e-08,1;UBERON:0004061,9.86e-08,1;UBERON:0006777,9.86e-08,1;UBERON:0005882,9.86e-08,1;UBERON:0010371,1.34e-07,73;UBERON:0003080,3.84e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.255129870453209,0.794327609607082,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0,0.837548997004143,1.12552522006336,1.5279824777681,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0.884610551949874,0.485300549842228,0,0,0,0.585561594023094,0.41889341362691,0,0.11981512450592,0,0,1.9472783122627,0.915001205637253,0,1.04294592115366,0.255715457330331,2.90903262383384,1.78465389374533,0,0.373220911830279,0.252722758433675,0.210441855886474,0,0,0,0,0,0.2562274405697,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,1.26173969138476,0,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,3.01582567878545,1.08781136763742,0,0,2.0871576698413,2.22702204525186,0,0,0,0,0,0.238968797952552,0,0,0,0,0,1.60660658210904,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0.337912250981556,0,0.13020438484395,0,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0,0,0,0,0,0,0.0762068066549998,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:6497916..6497919,+ | |||
}} |
Latest revision as of 21:09, 5 August 2015
Short description: | p@chr1:6497916..6497919, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:6497916..6497919, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.09e-13 | 2 |
neuron of the substantia nigra | 3.51e-09 | 3 |
monopoietic cell | 2.76e-07 | 4 |
myeloid leukocyte | 2.76e-07 | 4 |
phagocyte | 2.76e-07 | 4 |
monocyte | 2.76e-07 | 4 |
macrophage | 2.76e-07 | 4 |
tissue-resident macrophage | 2.76e-07 | 4 |
macrophage dendritic cell progenitor | 2.76e-07 | 4 |
monoblast | 2.76e-07 | 4 |
promonocyte | 2.76e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
regional part of midbrain | 1.09e-14 | 4 |
midbrain | 1.09e-14 | 4 |
presumptive midbrain | 1.09e-14 | 4 |
midbrain neural tube | 1.09e-14 | 4 |
medulla oblongata | 5.25e-14 | 2 |
brainstem | 5.25e-14 | 2 |
myelencephalon | 5.25e-14 | 2 |
future myelencephalon | 5.25e-14 | 2 |
brain | 2.22e-12 | 47 |
future brain | 2.22e-12 | 47 |
central nervous system | 3.53e-11 | 73 |
neural tube | 3.85e-11 | 52 |
neural rod | 3.85e-11 | 52 |
future spinal cord | 3.85e-11 | 52 |
neural keel | 3.85e-11 | 52 |
nervous system | 7.64e-11 | 75 |
regional part of nervous system | 1.39e-10 | 54 |
regional part of brain | 3.25e-10 | 46 |
substantia nigra | 3.51e-09 | 3 |
telencephalic nucleus | 3.51e-09 | 3 |
midbrain nucleus | 3.51e-09 | 3 |
neural nucleus | 3.51e-09 | 3 |
nucleus of brain | 3.51e-09 | 3 |
neurectoderm | 7.77e-09 | 64 |
neural plate | 7.77e-09 | 64 |
presumptive neural plate | 7.77e-09 | 64 |
ectoderm-derived structure | 2.92e-08 | 95 |
ectoderm | 2.92e-08 | 95 |
presumptive ectoderm | 2.92e-08 | 95 |
corpora quadrigemina | 9.86e-08 | 1 |
midbrain tectum | 9.86e-08 | 1 |
neural tube mantle layer | 9.86e-08 | 1 |
tectal plate | 9.86e-08 | 1 |
neural tube alar plate | 9.86e-08 | 1 |
ecto-epithelium | 1.34e-07 | 73 |
anterior neural tube | 3.84e-07 | 40 |