FFCP PHASE1:Mm9::chr10:126913630..126913649,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:126913630..126913649,+
|short_description=p@chr10:126913630..126913649,+
|description=CAGE_peak_at_chr10:126913630..126913649,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=857 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126913630..126913649,+ | |||
|description=CAGE_peak_at_chr10:126913630..126913649,+ | |||
|id=chr10:126913630..126913649,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.69e-10!114;UBERON:0004111!2.10e-09!122;UBERON:0000955!2.58e-09!50;UBERON:0006238!2.58e-09!50;UBERON:0002020!3.18e-09!34;UBERON:0001049!3.59e-09!52;UBERON:0005068!3.59e-09!52;UBERON:0006241!3.59e-09!52;UBERON:0007135!3.59e-09!52;UBERON:0000033!5.72e-09!63;UBERON:0002346!6.16e-09!71;UBERON:0003075!6.16e-09!71;UBERON:0007284!6.16e-09!71;UBERON:0002616!8.46e-09!49;UBERON:0003056!3.02e-08!49;UBERON:0002791!5.21e-08!29;UBERON:0003528!5.21e-08!29;UBERON:0001893!5.21e-08!29;UBERON:0002021!6.59e-08!10;UBERON:0000411!6.59e-08!10;UBERON:0001950!6.59e-08!10;UBERON:0003080!1.19e-07!40;UBERON:0001017!1.26e-07!73;UBERON:0005743!1.26e-07!73;UBERON:0000956!1.79e-07!21;UBERON:0001869!1.79e-07!21;UBERON:0000203!1.79e-07!21;UBERON:0002780!2.26e-07!39;UBERON:0001890!2.26e-07!39;UBERON:0006240!2.26e-07!39;UBERON:0004121!5.15e-07!102;UBERON:0000924!5.15e-07!102;UBERON:0006601!5.15e-07!102;UBERON:0000073!5.41e-07!75;UBERON:0001016!5.41e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.82e-11,92;UBERON:0000025,1.55e-10,114;UBERON:0000073,1.91e-10,54;UBERON:0002020,6.04e-10,34;UBERON:0002021,8.48e-10,10;UBERON:0000411,8.48e-10,10;UBERON:0001950,8.48e-10,10;UBERON:0001049,2.13e-09,52;UBERON:0005068,2.13e-09,52;UBERON:0006241,2.13e-09,52;UBERON:0007135,2.13e-09,52;UBERON:0002346,6.24e-09,64;UBERON:0003075,6.24e-09,64;UBERON:0007284,6.24e-09,64;UBERON:0004111,6.50e-09,122;UBERON:0003528,1.97e-08,29;UBERON:0002791,1.97e-08,29;UBERON:0001893,1.97e-08,29;UBERON:0000955,2.60e-08,47;UBERON:0006238,2.60e-08,47;UBERON:0003056,3.08e-08,49;UBERON:0002616,9.98e-08,46;UBERON:0003080,1.19e-07,40;UBERON:0000956,1.40e-07,21;UBERON:0001869,1.40e-07,21;UBERON:0000203,1.40e-07,21;UBERON:0002780,2.57e-07,39;UBERON:0001890,2.57e-07,39;UBERON:0006240,2.57e-07,39;UBERON:0001017,2.59e-07,73;UBERON:0001016,9.08e-07,75;UBERON:0002619,9.11e-07,17 | |||
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| ||
|short_description=p@chr10:126913630..126913649,+ | |||
}} | }} |
Latest revision as of 01:29, 4 August 2015
Short description: | p@chr10:126913630..126913649, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126913630..126913649, + |
Coexpression cluster: | MCL_coexpression_mm9:857 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.82e-11 | 92 |
tube | 1.55e-10 | 114 |
regional part of nervous system | 1.91e-10 | 54 |
gray matter | 6.04e-10 | 34 |
occipital lobe | 8.48e-10 | 10 |
visual cortex | 8.48e-10 | 10 |
neocortex | 8.48e-10 | 10 |
neural tube | 2.13e-09 | 52 |
neural rod | 2.13e-09 | 52 |
future spinal cord | 2.13e-09 | 52 |
neural keel | 2.13e-09 | 52 |
neurectoderm | 6.24e-09 | 64 |
neural plate | 6.24e-09 | 64 |
presumptive neural plate | 6.24e-09 | 64 |
anatomical conduit | 6.50e-09 | 122 |
brain grey matter | 1.97e-08 | 29 |
regional part of telencephalon | 1.97e-08 | 29 |
telencephalon | 1.97e-08 | 29 |
brain | 2.60e-08 | 47 |
future brain | 2.60e-08 | 47 |
pre-chordal neural plate | 3.08e-08 | 49 |
regional part of brain | 9.98e-08 | 46 |
anterior neural tube | 1.19e-07 | 40 |
cerebral cortex | 1.40e-07 | 21 |
cerebral hemisphere | 1.40e-07 | 21 |
pallium | 1.40e-07 | 21 |
regional part of forebrain | 2.57e-07 | 39 |
forebrain | 2.57e-07 | 39 |
future forebrain | 2.57e-07 | 39 |
central nervous system | 2.59e-07 | 73 |
nervous system | 9.08e-07 | 75 |
regional part of cerebral cortex | 9.11e-07 | 17 |