FFCP PHASE1:Mm9::chr2:181100122..181100143,+: Difference between revisions
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{{FFCP|EntrezGene=229007|HGNC=|UniProt=Q8VDM1|association_with_transcript=0bp_to_ENSMUST00000116366,NM_001048148,uc008omc.1_5end|description=CAGE_peak_2_at_Zgpat_5end|id=chr2:181100122..181100143,+|ontology_enrichment_celltype=CL:0000117!2.55e-11!23;CL:0000337!2.55e-11!23;CL:0000540!1.97e-09!33;CL:0000047!1.97e-09!33;CL:0000031!1.97e-09!33;CL:0000404!1.97e-09!33;CL:0000221!6.73e-07!44;CL:0000133!6.73e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.55e-11,23;CL:0000337,2.55e-11,23;CL:0000540,1.97e-09,33;CL:0000047,1.97e-09,33;CL:0000031,1.97e-09,33;CL:0000404,1.97e-09,33;CL:0000221,6.73e-07,44;CL:0000133,6.73e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!7.15e-22!94;UBERON:0007811!1.18e-21!86;UBERON:0001017!2.96e-19!73;UBERON:0005743!2.96e-19!73;UBERON:0001049!1.08e-18!52;UBERON:0005068!1.08e-18!52;UBERON:0006241!1.08e-18!52;UBERON:0007135!1.08e-18!52;UBERON:0000073!4.92e-18!75;UBERON:0001016!4.92e-18!75;UBERON:0000033!5.02e-18!63;UBERON:0000955!1.60e-17!50;UBERON:0006238!1.60e-17!50;UBERON:0002616!5.26e-17!49;UBERON:0002346!2.88e-16!71;UBERON:0003075!2.88e-16!71;UBERON:0007284!2.88e-16!71;UBERON:0003056!3.34e-15!49;UBERON:0003080!8.68e-15!40;UBERON:0002780!3.08e-14!39;UBERON:0001890!3.08e-14!39;UBERON:0006240!3.08e-14!39;UBERON:0004121!8.81e-14!102;UBERON:0000924!8.81e-14!102;UBERON:0006601!8.81e-14!102;UBERON:0002020!2.44e-13!34;UBERON:0002791!1.07e-10!29;UBERON:0003528!1.07e-10!29;UBERON:0001893!1.07e-10!29;UBERON:0000956!2.31e-07!21;UBERON:0001869!2.31e-07!21;UBERON:0000203!2.31e-07!21;UBERON:0000064!7.12e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.56e-20,54;UBERON:0001017,2.96e-19,73;UBERON:0001049,1.08e-18,52;UBERON:0005068,1.08e-18,52;UBERON:0006241,1.08e-18,52;UBERON:0007135,1.08e-18,52;UBERON:0002346,1.45e-18,64;UBERON:0003075,1.45e-18,64;UBERON:0007284,1.45e-18,64;UBERON:0001016,4.92e-18,75;UBERON:0000955,1.28e-16,47;UBERON:0006238,1.28e-16,47;UBERON:0010371,3.35e-16,73;UBERON:0002616,4.14e-16,46;UBERON:0003056,3.34e-15,49;UBERON:0004121,3.50e-15,95;UBERON:0000924,3.50e-15,95;UBERON:0006601,3.50e-15,95;UBERON:0003080,8.68e-15,40;UBERON:0002780,3.08e-14,39;UBERON:0001890,3.08e-14,39;UBERON:0006240,3.08e-14,39;UBERON:0002020,2.44e-13,34;UBERON:0010314,9.66e-13,92;UBERON:0003528,1.07e-10,29;UBERON:0002791,1.07e-10,29;UBERON:0001893,1.07e-10,29;UBERON:0000956,2.31e-07,21;UBERON:0001869,2.31e-07,21;UBERON:0000203,2.31e-07,21|phase1_expression=13.7728008510123,6.2815573375085,7.27998783023258,15.4256747766483,18.0322462780685,7.89032577985882,7.94282978024787,27.115897922731,6.335492496825,8.42632294759177,20.2037202506096,17.8689636149554,25.5089087597497,31.2965040660011,8.66085380720723,8.30148596298286,5.59649502502517,9.14840279538889,8.08975158273859,10.6097412949508,8.33424243480484,3.17731043842833,4.96279599363977,5.75972722056264,5.96464130774642,2.29692785646008,8.18447792702242,6.89507944594845,3.23039813075836,3.78045194639896,5.98672378769323,15.8757668364908,17.221814052368,0,6.35473563452804,6.98185510505668,7.9626048942324,14.6486070757918,4.6880120671428,6.80580867165938,7.05877785637217,8.19654581950135,13.1087795318411,6.92432498865675,7.09638518536602,5.13930906052708,10.9534788208725,6.1047043786525,7.46933021297204,6.80504646759992,3.3596741190087,4.31257693094915,7.3824346665404,34.0920206745332,9.74672017513146,2.82985379639542,5.73066879877513,6.70373719960675,21.0409119293982,20.6306481916093,18.3811107016792,5.08266798103698,2.66788438833342,6.29929802096979,8.89979726310277,5.6838409195688,9.28760342607055,10.373894243682,9.95420278161385,12.2855403881839,10.0955981448663,15.996455126613,13.693849539,9.55428233876641,11.4056110511701,14.7075005857603,9.91042928994498,11.4918604276669,10.9060638611933,20.5742608859102,20.8591827413494,18.2319679694866,11.725685958058,16.8828783009504,12.5294563176984,15.6153150301044,12.8134512719193,17.1487490159277,6.89108359331975,4.91215140694106,11.5945795480671,5.16254326188832,6.79971333707751,6.47643829965381,7.14754059192436,7.16843019355737,4.21333260395256,4.94247935476367,4.1565760736459,5.3000936176551,15.7744630149882,10.2661181931454,10.1922095882658,7.11066703153331,3.89683873820185,3.29367825117628,3.53867111510348,4.22480354960522,9.06282592765101,9.79718117827843,7.98032503124225,8.52503339273995,4.84292544237723,7.53613202763113,5.64425794251383,6.78599593180248,3.70792451601561,4.62717942143717,7.96149496754887,6.95597454773859,3.5334642953663,4.363877278217,5.59175283654366,10.8328894894272,15.9179497178226,6.89734049063197,2.39630249011841,2.39961092397363,3.04968544975355,15.2786452192919,10.0650132620098,9.42407640846483,15.4703644971126,13.2972037811772,14.7529511637288,12.3303359931496,6.21220119486929,5.22509276562391,6.06534620240819,7.15502310014011,10.539755879979,10.5754968039398,8.28285797104606,10.2479276128286,9.59314638033723,10.1209839025031,11.3379086717272,7.24369438069244,5.6047678162539,13.9938499324186,11.61277419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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229007 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8VDM1 | |||
|association_with_transcript=0bp_to_ENSMUST00000116366,NM_001048148,uc008omc.1_5end | |||
|cluster_id=chr2:181100122..181100143,+ | |||
|description=CAGE_peak_2_at_Zgpat_5end | |||
|id=chr2:181100122..181100143,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.55e-11!23;CL:0000337!2.55e-11!23;CL:0000540!1.97e-09!33;CL:0000047!1.97e-09!33;CL:0000031!1.97e-09!33;CL:0000404!1.97e-09!33;CL:0000221!6.73e-07!44;CL:0000133!6.73e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.55e-11,23;CL:0000337,2.55e-11,23;CL:0000540,1.97e-09,33;CL:0000047,1.97e-09,33;CL:0000031,1.97e-09,33;CL:0000404,1.97e-09,33;CL:0000221,6.73e-07,44;CL:0000133,6.73e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.15e-22!94;UBERON:0007811!1.18e-21!86;UBERON:0001017!2.96e-19!73;UBERON:0005743!2.96e-19!73;UBERON:0001049!1.08e-18!52;UBERON:0005068!1.08e-18!52;UBERON:0006241!1.08e-18!52;UBERON:0007135!1.08e-18!52;UBERON:0000073!4.92e-18!75;UBERON:0001016!4.92e-18!75;UBERON:0000033!5.02e-18!63;UBERON:0000955!1.60e-17!50;UBERON:0006238!1.60e-17!50;UBERON:0002616!5.26e-17!49;UBERON:0002346!2.88e-16!71;UBERON:0003075!2.88e-16!71;UBERON:0007284!2.88e-16!71;UBERON:0003056!3.34e-15!49;UBERON:0003080!8.68e-15!40;UBERON:0002780!3.08e-14!39;UBERON:0001890!3.08e-14!39;UBERON:0006240!3.08e-14!39;UBERON:0004121!8.81e-14!102;UBERON:0000924!8.81e-14!102;UBERON:0006601!8.81e-14!102;UBERON:0002020!2.44e-13!34;UBERON:0002791!1.07e-10!29;UBERON:0003528!1.07e-10!29;UBERON:0001893!1.07e-10!29;UBERON:0000956!2.31e-07!21;UBERON:0001869!2.31e-07!21;UBERON:0000203!2.31e-07!21;UBERON:0000064!7.12e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.56e-20,54;UBERON:0001017,2.96e-19,73;UBERON:0001049,1.08e-18,52;UBERON:0005068,1.08e-18,52;UBERON:0006241,1.08e-18,52;UBERON:0007135,1.08e-18,52;UBERON:0002346,1.45e-18,64;UBERON:0003075,1.45e-18,64;UBERON:0007284,1.45e-18,64;UBERON:0001016,4.92e-18,75;UBERON:0000955,1.28e-16,47;UBERON:0006238,1.28e-16,47;UBERON:0010371,3.35e-16,73;UBERON:0002616,4.14e-16,46;UBERON:0003056,3.34e-15,49;UBERON:0004121,3.50e-15,95;UBERON:0000924,3.50e-15,95;UBERON:0006601,3.50e-15,95;UBERON:0003080,8.68e-15,40;UBERON:0002780,3.08e-14,39;UBERON:0001890,3.08e-14,39;UBERON:0006240,3.08e-14,39;UBERON:0002020,2.44e-13,34;UBERON:0010314,9.66e-13,92;UBERON:0003528,1.07e-10,29;UBERON:0002791,1.07e-10,29;UBERON:0001893,1.07e-10,29;UBERON:0000956,2.31e-07,21;UBERON:0001869,2.31e-07,21;UBERON:0000203,2.31e-07,21 | |||
|phase1_expression=13.7728008510123,6.2815573375085,7.27998783023258,15.4256747766483,18.0322462780685,7.89032577985882,7.94282978024787,27.115897922731,6.335492496825,8.42632294759177,20.2037202506096,17.8689636149554,25.5089087597497,31.2965040660011,8.66085380720723,8.30148596298286,5.59649502502517,9.14840279538889,8.08975158273859,10.6097412949508,8.33424243480484,3.17731043842833,4.96279599363977,5.75972722056264,5.96464130774642,2.29692785646008,8.18447792702242,6.89507944594845,3.23039813075836,3.78045194639896,5.98672378769323,15.8757668364908,17.221814052368,0,6.35473563452804,6.98185510505668,7.9626048942324,14.6486070757918,4.6880120671428,6.80580867165938,7.05877785637217,8.19654581950135,13.1087795318411,6.92432498865675,7.09638518536602,5.13930906052708,10.9534788208725,6.1047043786525,7.46933021297204,6.80504646759992,3.3596741190087,4.31257693094915,7.3824346665404,34.0920206745332,9.74672017513146,2.82985379639542,5.73066879877513,6.70373719960675,21.0409119293982,20.6306481916093,18.3811107016792,5.08266798103698,2.66788438833342,6.29929802096979,8.89979726310277,5.6838409195688,9.28760342607055,10.373894243682,9.95420278161385,12.2855403881839,10.0955981448663,15.996455126613,13.693849539,9.55428233876641,11.4056110511701,14.7075005857603,9.91042928994498,11.4918604276669,10.9060638611933,20.5742608859102,20.8591827413494,18.2319679694866,11.725685958058,16.8828783009504,12.5294563176984,15.6153150301044,12.8134512719193,17.1487490159277,6.89108359331975,4.91215140694106,11.5945795480671,5.16254326188832,6.79971333707751,6.47643829965381,7.14754059192436,7.16843019355737,4.21333260395256,4.94247935476367,4.1565760736459,5.3000936176551,15.7744630149882,10.2661181931454,10.1922095882658,7.11066703153331,3.89683873820185,3.29367825117628,3.53867111510348,4.22480354960522,9.06282592765101,9.79718117827843,7.98032503124225,8.52503339273995,4.84292544237723,7.53613202763113,5.64425794251383,6.78599593180248,3.70792451601561,4.62717942143717,7.96149496754887,6.95597454773859,3.5334642953663,4.363877278217,5.59175283654366,10.8328894894272,15.9179497178226,6.89734049063197,2.39630249011841,2.39961092397363,3.04968544975355,15.2786452192919,10.0650132620098,9.42407640846483,15.4703644971126,13.2972037811772,14.7529511637288,12.3303359931496,6.21220119486929,5.22509276562391,6.06534620240819,7.15502310014011,10.539755879979,10.5754968039398,8.28285797104606,10.2479276128286,9.59314638033723,10.1209839025031,11.3379086717272,7.24369438069244,5.6047678162539,13.9938499324186,11.6127741948206,8.11024209982027,10.5657954705727,8.358051996532,6.99659263787008,12.7381930763836,5.61770549850588,2.31613116403244,2.55747149456033,8.90640821902658,7.73935997937617,5.76198596675248,6.62885259638589,7.67380503814875,8.4846912088058,8.37122201101468,7.77992864058896,5.95503246072564,9.05079174524142,5.74586124276833,6.08016071593918,11.9883989688773,7.46470391989572,7.64976586934119,14.2997165023607,10.1875566255492,10.2429822724977,8.19796756656987,9.81125952462076,11.3795969211615,8.24751752461397,8.0673409849337,9.56225588532942,11.9842144450912,9.01605216934572,9.55253937399263,8.79673230800943,8.95304124185179,13.2575579241002,4.49409704327111,6.05186539649144,8.16479220342906,6.63837653335786,6.85491075658373,7.88954149711563,6.72049381889537,7.5641469995374,8.90724912607046,8.78987866027176,7.52811754695971,6.12295038581362,5.42947521255922,5.63259991465583,6.00642380577939,5.50365186316968,8.54476027062444,5.68008339887808,7.23531479257251,4.83789118384698,4.60313819921297,3.56697498905078,6.58947391651396,4.31304619582064,5.20997326735905,5.30464044294753,5.05157755894223,7.3552939543984,4.3419916922703,5.35784251483154,9.85355341206521,8.63714375142737,7.97801903143384,7.74477819352057,7.70528784232352,8.33152743101048,6.24427673144956,6.46304090835383,7.75126413770712,10.3645599627367,7.86543910635542,6.73471429276993,4.48412081602686,3.01582567878545,7.61467957346193,4.42587845717133,4.13905119457099,10.4357883492065,14.2998257642488,0.983609672260053,4.03953483526997,7.57219726599016,5.85658116444958,11.2020166821055,8.36390792833932,8.68914828921337,9.34152551603147,6.47697122679831,8.76767573733936,7.11518000303742,13.8168166061377,8.94222536812092,8.72521457969551,6.18970445543589,8.74341651754438,11.9470624505967,6.31229654002952,7.25576536715402,5.09233715340925,6.79194353625777,8.30074899448604,6.71913562237375,7.63420831902762,6.77345018930971,9.48110273807448,4.21674434299995,9.28219889233682,10.2131881726136,9.72329907769075,14.746889951234,10.7168517515796,11.5271151867478,11.7723419617367,10.86023535974,11.5696680663548,5.86679270159276,5.93129798418696,7.05690873775878,9.23363016472288,5.00539722757307,4.94565984410878,10.1466492402666,6.89391778929257,6.12109756922687,8.15871328846243,5.29699730473343,6.19160603889667,6.2966139305702,6.2161590811548,6.42462870288818,7.32090154260872,3.0596117398894,3.63873776041511,2.3493995546752,10.5013767981662,7.90839983952838,8.53941761932765,6.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| |||
|short_description=p2@Zgpat | |||
}} |
Latest revision as of 08:10, 26 September 2015
Short description: | p2@Zgpat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Zgpat_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000116366, NM_001048148, uc008omc.1_5end |
EntrezGene: | Zgpat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.55e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.55e-11 | 23 |
neuron | 1.97e-09 | 33 |
neuronal stem cell | 1.97e-09 | 33 |
neuroblast | 1.97e-09 | 33 |
electrically signaling cell | 1.97e-09 | 33 |
ectodermal cell | 6.73e-07 | 44 |
neurectodermal cell | 6.73e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 7.56e-20 | 54 |
central nervous system | 2.96e-19 | 73 |
neural tube | 1.08e-18 | 52 |
neural rod | 1.08e-18 | 52 |
future spinal cord | 1.08e-18 | 52 |
neural keel | 1.08e-18 | 52 |
neurectoderm | 1.45e-18 | 64 |
neural plate | 1.45e-18 | 64 |
presumptive neural plate | 1.45e-18 | 64 |
nervous system | 4.92e-18 | 75 |
brain | 1.28e-16 | 47 |
future brain | 1.28e-16 | 47 |
ecto-epithelium | 3.35e-16 | 73 |
regional part of brain | 4.14e-16 | 46 |
pre-chordal neural plate | 3.34e-15 | 49 |
ectoderm-derived structure | 3.50e-15 | 95 |
ectoderm | 3.50e-15 | 95 |
presumptive ectoderm | 3.50e-15 | 95 |
anterior neural tube | 8.68e-15 | 40 |
regional part of forebrain | 3.08e-14 | 39 |
forebrain | 3.08e-14 | 39 |
future forebrain | 3.08e-14 | 39 |
gray matter | 2.44e-13 | 34 |
structure with developmental contribution from neural crest | 9.66e-13 | 92 |
brain grey matter | 1.07e-10 | 29 |
regional part of telencephalon | 1.07e-10 | 29 |
telencephalon | 1.07e-10 | 29 |
cerebral cortex | 2.31e-07 | 21 |
cerebral hemisphere | 2.31e-07 | 21 |
pallium | 2.31e-07 | 21 |