FFCP PHASE1:Mm9::chr4:151671383..151671435,+: Difference between revisions
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{{FFCP|EntrezGene=57295|HGNC=|UniProt=Q6PGA6|association_with_transcript=0bp_to_ENSMUST00000151372_5end|description=CAGE_peak_1_at_Icmt_5end|id=chr4:151671383..151671435,+|ontology_enrichment_celltype=CL:0000055!5.24e-09!50;CL:0000221!1.58e-08!44;CL:0000133!1.58e-08!44;CL:0002319!2.27e-08!43;CL:0002321!1.75e-07!70;CL:0000220!1.75e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.58e-08,44;CL:0000133,1.58e-08,44;CL:0002319,2.27e-08,43;CL:0002321,1.75e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.69e-15!102;UBERON:0000924!2.69e-15!102;UBERON:0006601!2.69e-15!102;UBERON:0000073!5.32e-14!75;UBERON:0001016!5.32e-14!75;UBERON:0001017!1.03e-13!73;UBERON:0005743!1.03e-13!73;UBERON:0000033!3.92e-12!63;UBERON:0000480!5.23e-12!308;UBERON:0000467!5.23e-12!308;UBERON:0000923!5.22e-11!314;UBERON:0005291!5.22e-11!314;UBERON:0006598!5.22e-11!314;UBERON:0002532!5.22e-11!314;UBERON:0001049!9.43e-11!52;UBERON:0005068!9.43e-11!52;UBERON:0006241!9.43e-11!52;UBERON:0007135!9.43e-11!52;UBERON:0002346!1.01e-10!71;UBERON:0003075!1.01e-10!71;UBERON:0007284!1.01e-10!71;UBERON:0004111!1.40e-10!122;UBERON:0000955!3.41e-10!50;UBERON:0006238!3.41e-10!50;UBERON:0002616!7.96e-10!49;UBERON:0002050!8.34e-10!317;UBERON:0005423!8.34e-10!317;UBERON:0000025!3.84e-09!114;UBERON:0000062!8.54e-09!269;UBERON:0003056!4.23e-07!49;UBERON:0002020!6.03e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.85e-16,95;UBERON:0000924,8.85e-16,95;UBERON:0006601,8.85e-16,95;UBERON:0001016,5.32e-14,75;UBERON:0001017,1.03e-13,73;UBERON:0005423,9.66e-12,304;UBERON:0010371,1.17e-11,73;UBERON:0000073,1.27e-11,54;UBERON:0002346,2.50e-11,64;UBERON:0003075,2.50e-11,64;UBERON:0007284,2.50e-11,64;UBERON:0010314,4.33e-11,92;UBERON:0001049,9.43e-11,52;UBERON:0005068,9.43e-11,52;UBERON:0006241,9.43e-11,52;UBERON:0007135,9.43e-11,52;UBERON:0000923,1.02e-10,291;UBERON:0010316,1.02e-10,291;UBERON:0005291,1.02e-10,291;UBERON:0006598,1.02e-10,291;UBERON:0010317,1.02e-10,291;UBERON:0002532,1.02e-10,291;UBERON:0004111,1.40e-10,122;UBERON:0002050,1.42e-09,294;UBERON:0000025,3.84e-09,114;UBERON:0000955,5.91e-09,47;UBERON:0006238,5.91e-09,47;UBERON:0002616,1.34e-08,46;UBERON:0003056,4.23e-07,49;UBERON:0002020,6.03e-07,34|phase1_expression=11.69086583865,12.2141392673776,11.8299802241279,9.37639055051173,13.023288978605,6.37941233265181,7.00837921786577,6.58528949552039,4.646027831005,4.91535505276186,5.99262888789267,8.29630453551499,5.30722262786738,6.46910977900581,8.32774404539157,7.08663435864391,11.1929900500503,10.7257136221801,10.8320402548534,11.8829102503448,15.2227489370415,9.03547655928056,10.1867917764185,9.91953021319121,10.5528269290898,11.4846392823004,9.47676391549965,9.48073423817912,10.0712412311878,8.31699428207772,11.5299865540758,8.25539875497521,8.61090702618398,0,3.75507105676657,7.48055904113216,5.9209113316087,7.95210098400125,10.9386948233332,4.18818995179039,8.2352408324342,8.87959130445979,2.42755176515577,10.5753327099485,9.93493925951243,8.62669735159903,17.9950009200049,13.0815093828268,15.1583466086786,16.5265414213141,14.6985742706631,4.31257693094915,8.38913030288682,6.5282592781021,7.05796978199174,11.0621557495457,13.4670716771216,15.9858348606007,13.3528864167335,9.52183762689659,16.4796164911607,22.0248945844936,18.6751907183339,28.7967909530048,30.6548572395762,20.6039233334369,17.0772062995491,13.4476406862544,10.9910989046986,10.8004750665353,8.2026734927039,15.1395021734016,17.6694832761291,10.534208732486,10.7346927540425,17.4651569455904,14.3150645299205,17.6208526557559,15.2070467923681,14.3756053625911,11.161492519494,10.4182674111352,18.1468949350898,10.6924895906019,16.5022107598955,15.3206864446307,11.2473627831291,13.2343606535963,9.84440513331393,14.3585964202892,12.4641730141721,11.185510400758,10.1995700056163,9.71465744948071,16.2444104361917,12.0967259516281,8.42666520790511,10.2258193546835,5.71529210126311,9.89350808628953,11.4083170019111,7.69958864485907,5.09610479413291,0,20.3501578550541,20.0154293725328,21.2320266906209,9.02052649780574,5.43769555659061,15.7348667408714,7.28638372417771,7.61163695780353,11.3001593655469,10.2491395575783,7.05532242814229,12.4409925416379,8.65182387070309,10.7003524120735,12.3845477272982,9.05894359705491,9.49618529379692,7.75800405016355,9.31958806090611,26.0574909340277,23.8769245767339,10.4737392635522,5.27186547826049,4.79922184794726,3.55796635804581,14.6794826616726,16.4700217014706,8.41884159156192,15.2965401769203,16.6215047264715,16.2074674756457,11.0324058886075,9.26738211037878,10.0769646194175,11.8779696463827,25.8843482740363,9.88915366516548,7.12696523743766,8.82304436046211,10.5493372485001,11.1579858608178,12.0426897067759,15.1796793786761,28.9747775227698,9.05385570317937,10.2117283290622,7.38994721488585,9.20622076195814,8.34141747676794,9.4028084960985,7.61393904709391,11.3449532086541,3.51106593656617,3.3455227924913,4.54661599032948,8.69928244649108,7.27030785941398,9.7233513188948,7.3390868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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57295 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q6PGA6 | |||
|association_with_transcript=0bp_to_ENSMUST00000151372_5end | |||
|cluster_id=chr4:151671383..151671435,+ | |||
|description=CAGE_peak_1_at_Icmt_5end | |||
|id=chr4:151671383..151671435,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.24e-09!50;CL:0000221!1.58e-08!44;CL:0000133!1.58e-08!44;CL:0002319!2.27e-08!43;CL:0002321!1.75e-07!70;CL:0000220!1.75e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.58e-08,44;CL:0000133,1.58e-08,44;CL:0002319,2.27e-08,43;CL:0002321,1.75e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.69e-15!102;UBERON:0000924!2.69e-15!102;UBERON:0006601!2.69e-15!102;UBERON:0000073!5.32e-14!75;UBERON:0001016!5.32e-14!75;UBERON:0001017!1.03e-13!73;UBERON:0005743!1.03e-13!73;UBERON:0000033!3.92e-12!63;UBERON:0000480!5.23e-12!308;UBERON:0000467!5.23e-12!308;UBERON:0000923!5.22e-11!314;UBERON:0005291!5.22e-11!314;UBERON:0006598!5.22e-11!314;UBERON:0002532!5.22e-11!314;UBERON:0001049!9.43e-11!52;UBERON:0005068!9.43e-11!52;UBERON:0006241!9.43e-11!52;UBERON:0007135!9.43e-11!52;UBERON:0002346!1.01e-10!71;UBERON:0003075!1.01e-10!71;UBERON:0007284!1.01e-10!71;UBERON:0004111!1.40e-10!122;UBERON:0000955!3.41e-10!50;UBERON:0006238!3.41e-10!50;UBERON:0002616!7.96e-10!49;UBERON:0002050!8.34e-10!317;UBERON:0005423!8.34e-10!317;UBERON:0000025!3.84e-09!114;UBERON:0000062!8.54e-09!269;UBERON:0003056!4.23e-07!49;UBERON:0002020!6.03e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.85e-16,95;UBERON:0000924,8.85e-16,95;UBERON:0006601,8.85e-16,95;UBERON:0001016,5.32e-14,75;UBERON:0001017,1.03e-13,73;UBERON:0005423,9.66e-12,304;UBERON:0010371,1.17e-11,73;UBERON:0000073,1.27e-11,54;UBERON:0002346,2.50e-11,64;UBERON:0003075,2.50e-11,64;UBERON:0007284,2.50e-11,64;UBERON:0010314,4.33e-11,92;UBERON:0001049,9.43e-11,52;UBERON:0005068,9.43e-11,52;UBERON:0006241,9.43e-11,52;UBERON:0007135,9.43e-11,52;UBERON:0000923,1.02e-10,291;UBERON:0010316,1.02e-10,291;UBERON:0005291,1.02e-10,291;UBERON:0006598,1.02e-10,291;UBERON:0010317,1.02e-10,291;UBERON:0002532,1.02e-10,291;UBERON:0004111,1.40e-10,122;UBERON:0002050,1.42e-09,294;UBERON:0000025,3.84e-09,114;UBERON:0000955,5.91e-09,47;UBERON:0006238,5.91e-09,47;UBERON:0002616,1.34e-08,46;UBERON:0003056,4.23e-07,49;UBERON:0002020,6.03e-07,34 | |||
|phase1_expression=11.69086583865,12.2141392673776,11.8299802241279,9.37639055051173,13.023288978605,6.37941233265181,7.00837921786577,6.58528949552039,4.646027831005,4.91535505276186,5.99262888789267,8.29630453551499,5.30722262786738,6.46910977900581,8.32774404539157,7.08663435864391,11.1929900500503,10.7257136221801,10.8320402548534,11.8829102503448,15.2227489370415,9.03547655928056,10.1867917764185,9.91953021319121,10.5528269290898,11.4846392823004,9.47676391549965,9.48073423817912,10.0712412311878,8.31699428207772,11.5299865540758,8.25539875497521,8.61090702618398,0,3.75507105676657,7.48055904113216,5.9209113316087,7.95210098400125,10.9386948233332,4.18818995179039,8.2352408324342,8.87959130445979,2.42755176515577,10.5753327099485,9.93493925951243,8.62669735159903,17.9950009200049,13.0815093828268,15.1583466086786,16.5265414213141,14.6985742706631,4.31257693094915,8.38913030288682,6.5282592781021,7.05796978199174,11.0621557495457,13.4670716771216,15.9858348606007,13.3528864167335,9.52183762689659,16.4796164911607,22.0248945844936,18.6751907183339,28.7967909530048,30.6548572395762,20.6039233334369,17.0772062995491,13.4476406862544,10.9910989046986,10.8004750665353,8.2026734927039,15.1395021734016,17.6694832761291,10.534208732486,10.7346927540425,17.4651569455904,14.3150645299205,17.6208526557559,15.2070467923681,14.3756053625911,11.161492519494,10.4182674111352,18.1468949350898,10.6924895906019,16.5022107598955,15.3206864446307,11.2473627831291,13.2343606535963,9.84440513331393,14.3585964202892,12.4641730141721,11.185510400758,10.1995700056163,9.71465744948071,16.2444104361917,12.0967259516281,8.42666520790511,10.2258193546835,5.71529210126311,9.89350808628953,11.4083170019111,7.69958864485907,5.09610479413291,0,20.3501578550541,20.0154293725328,21.2320266906209,9.02052649780574,5.43769555659061,15.7348667408714,7.28638372417771,7.61163695780353,11.3001593655469,10.2491395575783,7.05532242814229,12.4409925416379,8.65182387070309,10.7003524120735,12.3845477272982,9.05894359705491,9.49618529379692,7.75800405016355,9.31958806090611,26.0574909340277,23.8769245767339,10.4737392635522,5.27186547826049,4.79922184794726,3.55796635804581,14.6794826616726,16.4700217014706,8.41884159156192,15.2965401769203,16.6215047264715,16.2074674756457,11.0324058886075,9.26738211037878,10.0769646194175,11.8779696463827,25.8843482740363,9.88915366516548,7.12696523743766,8.82304436046211,10.5493372485001,11.1579858608178,12.0426897067759,15.1796793786761,28.9747775227698,9.05385570317937,10.2117283290622,7.38994721488585,9.20622076195814,8.34141747676794,9.4028084960985,7.61393904709391,11.3449532086541,3.51106593656617,3.3455227924913,4.54661599032948,8.69928244649108,7.27030785941398,9.7233513188948,7.33908680314152,5.70616272067471,8.02188987014367,10.2314935690179,11.5357562601836,8.05680862333469,10.3672705445493,14.6109043030395,11.9981838127866,10.5263990946239,11.6361561104257,13.2864354572768,11.3556572224629,8.02655976558419,9.91256348951394,8.72686869989696,9.59797127408553,7.89604684325491,6.44337306610467,5.64713868945359,7.78323153457046,9.13083005340284,12.8122846617018,7.08205505313247,8.29406189040889,9.54991065797524,9.94316844307513,11.6846523125049,11.2391785934841,11.1519113022446,11.7594098590911,8.68288695833939,11.270773567308,9.57161240872977,7.95205197387266,8.48643420672855,15.1767689098217,12.6944727262458,14.4438829614065,12.2163192282583,13.6368208460088,4.83850806576673,5.11053387294328,4.94696647246678,5.27436315610108,5.54707467430559,4.07401362850272,7.19240343627027,5.5125977103512,6.86403532970204,7.18841032636773,6.69853705803306,11.2333562321242,11.6186283855671,8.61107584905178,12.0610880340842,15.5192679739948,8.33762211790133,9.4519686336375,8.82674446030978,10.0916806764056,10.887906733718,10.2358765580986,13.4642217021881,12.9260818167077,12.4020226203314,17.6994793209811,14.2561083802692,16.0597033135283,14.4649058581512,4.52373851817817,14.1415477792864,12.7858710984949,11.0374698521893,13.3256989689867,15.2375192569864,6.72133276044369,10.3513080153793,9.4652465824877,8.19921363022941,11.4174400798383,11.2315335037699,8.46634961513098,11.0399847007645,10.5250782435473,10.2289550268959,15.4162233399144,14.4594592389813,10.7874464758284,10.3278050127008,7.65568708961808,16.8269525431986,7.96470830039777,7.04063844849446,7.25576536715402,7.73280826999182,8.85905678642318,9.53048958626175,5.68542244970086,8.36127577798263,9.9819265947722,11.6933600436252,7.37930260024991,7.21948802737308,13.2771446243977,6.84232157318979,10.0899773350549,14.1462443120851,10.995094485821,9.98865378571595,12.3411765451591,8.52501857520878,6.8054795338476,12.4980921809654,10.1443063105282,8.73897140589844,9.04200789497071,9.95163261314572,11.4597450243011,9.52017218521355,11.9507143018239,15.2048747648618,6.66396435111626,10.1129565301979,8.51894825900674,6.02779062415011,5.74115756428306,5.71945433016307,5.94924504978494,6.29781535456461,5.38979897837253,4.77335309007557,8.69923982348122,9.96265388921559,7.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| |||
|short_description=p1@Icmt | |||
}} |
Latest revision as of 19:01, 26 September 2015
Short description: | p1@Icmt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Icmt_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000151372_5end |
EntrezGene: | Icmt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.58e-08 | 44 |
neurectodermal cell | 1.58e-08 | 44 |
neural cell | 2.27e-08 | 43 |
embryonic cell | 1.75e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 8.85e-16 | 95 |
ectoderm | 8.85e-16 | 95 |
presumptive ectoderm | 8.85e-16 | 95 |
nervous system | 5.32e-14 | 75 |
central nervous system | 1.03e-13 | 73 |
developing anatomical structure | 9.66e-12 | 304 |
ecto-epithelium | 1.17e-11 | 73 |
regional part of nervous system | 1.27e-11 | 54 |
neurectoderm | 2.50e-11 | 64 |
neural plate | 2.50e-11 | 64 |
presumptive neural plate | 2.50e-11 | 64 |
structure with developmental contribution from neural crest | 4.33e-11 | 92 |
neural tube | 9.43e-11 | 52 |
neural rod | 9.43e-11 | 52 |
future spinal cord | 9.43e-11 | 52 |
neural keel | 9.43e-11 | 52 |
germ layer | 1.02e-10 | 291 |
germ layer / neural crest | 1.02e-10 | 291 |
embryonic tissue | 1.02e-10 | 291 |
presumptive structure | 1.02e-10 | 291 |
germ layer / neural crest derived structure | 1.02e-10 | 291 |
epiblast (generic) | 1.02e-10 | 291 |
anatomical conduit | 1.40e-10 | 122 |
embryonic structure | 1.42e-09 | 294 |
tube | 3.84e-09 | 114 |
brain | 5.91e-09 | 47 |
future brain | 5.91e-09 | 47 |
regional part of brain | 1.34e-08 | 46 |
pre-chordal neural plate | 4.23e-07 | 49 |
gray matter | 6.03e-07 | 34 |