FFCP PHASE1:Mm9::chr6:42299790..42299799,+: Difference between revisions
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{{FFCP|EntrezGene=22793|HGNC=|UniProt=Q62523,Q7TQE2|association_with_transcript=-27bp_to_ENSMUST00000070635,NM_011777,uc009bqy.1,uc009bqz.1,uc009bra.1,uc009brb.1_5end|description=CAGE_peak_5_at_Zyx_5end|id=chr6:42299790..42299799,+|ontology_enrichment_celltype=CL:0000540!2.67e-11!33;CL:0000047!2.67e-11!33;CL:0000031!2.67e-11!33;CL:0000404!2.67e-11!33;CL:0000117!4.58e-10!23;CL:0000337!4.58e-10!23;CL:0000221!8.00e-10!44;CL:0000133!8.00e-10!44;CL:0002319!1.33e-09!43;CL:0000393!8.18e-08!39;CL:0000211!8.18e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,5.42e-11,33;CL:0000047,5.42e-11,33;CL:0000031,5.42e-11,33;CL:0000404,5.42e-11,33;CL:0000117,4.05e-10,23;CL:0000337,4.05e-10,23;CL:0000393,1.88e-08,39;CL:0000211,1.88e-08,39;CL:0002319,4.57e-08,43;CL:0000221,9.30e-08,44;CL:0000133,9.30e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.03e-17!94;UBERON:0004121!2.03e-15!102;UBERON:0000924!2.03e-15!102;UBERON:0006601!2.03e-15!102;UBERON:0007811!4.43e-15!86;UBERON:0000073!5.61e-14!75;UBERON:0001016!5.61e-14!75;UBERON:0001017!5.90e-14!73;UBERON:0005743!5.90e-14!73;UBERON:0002346!2.10e-13!71;UBERON:0003075!2.10e-13!71;UBERON:0007284!2.10e-13!71;UBERON:0000033!1.06e-10!63;UBERON:0001049!2.63e-10!52;UBERON:0005068!2.63e-10!52;UBERON:0006241!2.63e-10!52;UBERON:0007135!2.63e-10!52;UBERON:0000955!4.87e-09!50;UBERON:0006238!4.87e-09!50;UBERON:0002616!1.34e-08!49;UBERON:0003056!1.07e-07!49;UBERON:0000475!4.09e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.02e-15,73;UBERON:0001016,4.28e-14,75;UBERON:0002346,2.50e-12,64;UBERON:0003075,2.50e-12,64;UBERON:0007284,2.50e-12,64;UBERON:0004121,4.57e-12,95;UBERON:0000924,4.57e-12,95;UBERON:0006601,4.57e-12,95;UBERON:0000073,1.28e-11,54;UBERON:0001049,1.66e-11,52;UBERON:0005068,1.66e-11,52;UBERON:0006241,1.66e-11,52;UBERON:0007135,1.66e-11,52;UBERON:0010371,2.21e-11,73;UBERON:0000955,1.47e-08,47;UBERON:0006238,1.47e-08,47;UBERON:0010314,1.54e-08,92;UBERON:0002370,2.76e-08,23;UBERON:0000974,2.76e-08,23;UBERON:0004807,2.76e-08,23;UBERON:0005058,2.76e-08,23;UBERON:0003351,2.76e-08,23;UBERON:0009113,2.76e-08,23;UBERON:0003295,2.76e-08,23;UBERON:0009722,2.76e-08,23;UBERON:0005562,2.76e-08,23;UBERON:0007690,2.76e-08,23;UBERON:0000153,3.79e-08,43;UBERON:0002616,7.05e-08,46;UBERON:0006562,8.68e-08,24;UBERON:0003408,8.68e-08,24;UBERON:0001557,8.68e-08,24;UBERON:0001042,8.68e-08,24;UBERON:0008814,8.68e-08,24;UBERON:0009145,8.68e-08,24;UBERON:0000072,1.92e-07,27;UBERON:0007811,3.15e-07,36;UBERON:0003056,8.79e-07,49;UBERON:0003080,9.81e-07,40|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0,0.34243593645101,0.159544317990673,0.342401459862411,0.699363219351979,0,0,0,0.788655413395594,0.274228867211478,0.84877930359606,0.340173160604279,0.496454756004426,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,1.31811709640683,0.194429899074283,0.139986421625363,0,0.671130424230945,0,1.00828139742739,0.514518872071894,0,0,3.84401275633236,1.5869729378161,0.633831403506179,0,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0.725827286159344,0.810035629990144,0.841299845405528,2.28520787523043,0.883474163806454,1.34739879136449,1.15014565221884,0.919218786610021,1.10115880999389,0.893811366596314,1.53606533256243,2.37395317914349,1.73826522844578,2.6045668527838,2.51264699101243,1.12552522006336,0.45839474333043,2.35702868378934,1.42371680799103,2.42319279572891,0.37863096666592,0.68014404096107,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0.35333957451034,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0,1.01104889002957,0.11418387971906,1.03575153458869,1.33597925158342,0.520455980298408,1.52232739156071,0.230615497256059,0.301445281105245,0.705532242814229,1.0053327306374,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,1.17112318804619,2.30391377494801,0.255457055208591,0.239630249011841,0,0.254140454146129,1.3481157546434,0.457500602818626,1.00523481690292,0.695297280769106,1.02286182932132,1.45451631191692,0.324482526135515,0.407357455401265,0.248813941220186,0.505445516867349,0.631325567659422,0.780722657776222,0.919608417733892,1.26043490863744,0.60281927134286,1.2246569847239,0.640568601424249,1.40552586839593,0.258703370739016,0.862271971731369,1.89106080167819,1.75951124163949,1.97276159184817,0.278047249225598,0.696504333044333,0.411564272815887,0.796137067273973,0.702213187313235,0,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.946978942340841,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.405344047729279,0.730999937126662,0,0.268412837520744,0.2102899485641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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22793 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q62523,Q7TQE2 | |||
|association_with_transcript=-27bp_to_ENSMUST00000070635,NM_011777,uc009bqy.1,uc009bqz.1,uc009bra.1,uc009brb.1_5end | |||
|cluster_id=chr6:42299790..42299799,+ | |||
|description=CAGE_peak_5_at_Zyx_5end | |||
|id=chr6:42299790..42299799,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.67e-11!33;CL:0000047!2.67e-11!33;CL:0000031!2.67e-11!33;CL:0000404!2.67e-11!33;CL:0000117!4.58e-10!23;CL:0000337!4.58e-10!23;CL:0000221!8.00e-10!44;CL:0000133!8.00e-10!44;CL:0002319!1.33e-09!43;CL:0000393!8.18e-08!39;CL:0000211!8.18e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.42e-11,33;CL:0000047,5.42e-11,33;CL:0000031,5.42e-11,33;CL:0000404,5.42e-11,33;CL:0000117,4.05e-10,23;CL:0000337,4.05e-10,23;CL:0000393,1.88e-08,39;CL:0000211,1.88e-08,39;CL:0002319,4.57e-08,43;CL:0000221,9.30e-08,44;CL:0000133,9.30e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.03e-17!94;UBERON:0004121!2.03e-15!102;UBERON:0000924!2.03e-15!102;UBERON:0006601!2.03e-15!102;UBERON:0007811!4.43e-15!86;UBERON:0000073!5.61e-14!75;UBERON:0001016!5.61e-14!75;UBERON:0001017!5.90e-14!73;UBERON:0005743!5.90e-14!73;UBERON:0002346!2.10e-13!71;UBERON:0003075!2.10e-13!71;UBERON:0007284!2.10e-13!71;UBERON:0000033!1.06e-10!63;UBERON:0001049!2.63e-10!52;UBERON:0005068!2.63e-10!52;UBERON:0006241!2.63e-10!52;UBERON:0007135!2.63e-10!52;UBERON:0000955!4.87e-09!50;UBERON:0006238!4.87e-09!50;UBERON:0002616!1.34e-08!49;UBERON:0003056!1.07e-07!49;UBERON:0000475!4.09e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.02e-15,73;UBERON:0001016,4.28e-14,75;UBERON:0002346,2.50e-12,64;UBERON:0003075,2.50e-12,64;UBERON:0007284,2.50e-12,64;UBERON:0004121,4.57e-12,95;UBERON:0000924,4.57e-12,95;UBERON:0006601,4.57e-12,95;UBERON:0000073,1.28e-11,54;UBERON:0001049,1.66e-11,52;UBERON:0005068,1.66e-11,52;UBERON:0006241,1.66e-11,52;UBERON:0007135,1.66e-11,52;UBERON:0010371,2.21e-11,73;UBERON:0000955,1.47e-08,47;UBERON:0006238,1.47e-08,47;UBERON:0010314,1.54e-08,92;UBERON:0002370,2.76e-08,23;UBERON:0000974,2.76e-08,23;UBERON:0004807,2.76e-08,23;UBERON:0005058,2.76e-08,23;UBERON:0003351,2.76e-08,23;UBERON:0009113,2.76e-08,23;UBERON:0003295,2.76e-08,23;UBERON:0009722,2.76e-08,23;UBERON:0005562,2.76e-08,23;UBERON:0007690,2.76e-08,23;UBERON:0000153,3.79e-08,43;UBERON:0002616,7.05e-08,46;UBERON:0006562,8.68e-08,24;UBERON:0003408,8.68e-08,24;UBERON:0001557,8.68e-08,24;UBERON:0001042,8.68e-08,24;UBERON:0008814,8.68e-08,24;UBERON:0009145,8.68e-08,24;UBERON:0000072,1.92e-07,27;UBERON:0007811,3.15e-07,36;UBERON:0003056,8.79e-07,49;UBERON:0003080,9.81e-07,40 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0,0.34243593645101,0.159544317990673,0.342401459862411,0.699363219351979,0,0,0,0.788655413395594,0.274228867211478,0.84877930359606,0.340173160604279,0.496454756004426,0.261199789138935,0,0.22940928106717,0.57423196411502,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,0,0,0,0.485510353031154,0,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,1.31811709640683,0.194429899074283,0.139986421625363,0,0.671130424230945,0,1.00828139742739,0.514518872071894,0,0,3.84401275633236,1.5869729378161,0.633831403506179,0,0.889294796111139,0,0,0.7104801149461,0.599200221036809,0.768436610643109,0.725827286159344,0.810035629990144,0.841299845405528,2.28520787523043,0.883474163806454,1.34739879136449,1.15014565221884,0.919218786610021,1.10115880999389,0.893811366596314,1.53606533256243,2.37395317914349,1.73826522844578,2.6045668527838,2.51264699101243,1.12552522006336,0.45839474333043,2.35702868378934,1.42371680799103,2.42319279572891,0.37863096666592,0.68014404096107,0.289864488701678,0,0,0,0.649776417447669,0.448026887097336,0,0,0,0.35333957451034,0.845060518660083,1.28326477414318,0,0,0.432982082022428,0,1.01104889002957,0.11418387971906,1.03575153458869,1.33597925158342,0.520455980298408,1.52232739156071,0.230615497256059,0.301445281105245,0.705532242814229,1.0053327306374,0.247194967734374,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0,0,1.17112318804619,2.30391377494801,0.255457055208591,0.239630249011841,0,0.254140454146129,1.3481157546434,0.457500602818626,1.00523481690292,0.695297280769106,1.02286182932132,1.45451631191692,0.324482526135515,0.407357455401265,0.248813941220186,0.505445516867349,0.631325567659422,0.780722657776222,0.919608417733892,1.26043490863744,0.60281927134286,1.2246569847239,0.640568601424249,1.40552586839593,0.258703370739016,0.862271971731369,1.89106080167819,1.75951124163949,1.97276159184817,0.278047249225598,0.696504333044333,0.411564272815887,0.796137067273973,0.702213187313235,0,0.284163499395593,0.207125772535502,0.234526059981096,0.36012412292203,0.946978942340841,0.590292695242212,0.308534225774757,0.697601834251224,0.268273401399619,0.350296027101508,0.16455984991348,0.32833492815819,0.405344047729279,0.730999937126662,0,0.268412837520744,0.210289948564127,0.720332286654991,0,0,0,0.928946687441754,0.515469845288373,0.80673409849337,0.667134131534611,0,0,0.164698954724011,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,1.32767530667157,0.456994050438915,1.1270773567308,0,0.969762435838129,0.771494018793504,0.632365371242573,0.442830443938806,0.31399745568275,0.616985819609003,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,1.10851914099963,0.568474235311454,1.46668478797823,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.975668239288994,0.315270288212382,0.221464689648775,0.478364305972461,0,0.172684981865896,0.289298117163023,0,0.54390568381871,0.491764273019036,0.275936746304732,0.963303539926752,2.22702204525186,0.163934945376675,0,0.315508219416257,1.17131623288992,1.29254038639679,0.716906393857656,1.11399337041197,0.283076530788832,0.404810701674894,1.46127928955656,0.790575555893047,1.60660658210904,0.99358059645788,1.78065603667255,0.81443479676788,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,1.70219802876894,0.36012218806262,1.16422815404479,0.857348140126369,1.41872186913819,2.31879462882692,1.81003922662333,0.608929898229199,0,0,0.882113592219848,0.16488625294148,1.13025098687134,0.361877549568935,0.119372344003136,0.328281799490123,0,2.22510362412612,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0.419854356970974,0.552799895217695,0,0.949007980743406,0.609958401380546,0,0.627264888043406,0,0,0.330613822901344,0,0.388844919875379,0.621339313086926,0.56369293868419,0.299033092087958,0,0.583353565032143,0.129159823477731,0.168956125490778,0.821500670520278,0.651021924219751,0.734015410979976,1.20792060413003,0,1.89606672376907,0.608175645870493,0.616265742988964,1.81889152168913,1.9692936523423,2.78153896693771,1.9231271923195,2.21534290761866,2.42319479875554,1.752756553065,2.31900225814733,3.21611006441183,2.98256709085021,3.03879945672079,0,0.221985953374065,0.0897138566094757,0,0.772758376128762,0.375364950902364,0,0,0.501572104035363,0,0.460325236507177,1.71868654031819,0.343706364687375,0,0,1.35004500046361,0,0.453142408984205,1.03552062350364,0.518936737920883,1.59609949360412,1.02440163452481,0.243106717068294,0.419226325255965,0.183843508450014,1.33348036680969,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0,0.187283014939765,0.768301828858431,0.918967503289812,0.476293691283074,0.347652977834566,0.192909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| |||
|short_description=p5@Zyx | |||
}} |
Latest revision as of 05:46, 27 September 2015
Short description: | p5@Zyx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Zyx_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENSMUST00000070635, NM_011777, uc009bqy.1, uc009bqz.1, uc009bra.1, uc009brb.1_5end |
EntrezGene: | Zyx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.42e-11 | 33 |
neuronal stem cell | 5.42e-11 | 33 |
neuroblast | 5.42e-11 | 33 |
electrically signaling cell | 5.42e-11 | 33 |
CNS neuron (sensu Vertebrata) | 4.05e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.05e-10 | 23 |
electrically responsive cell | 1.88e-08 | 39 |
electrically active cell | 1.88e-08 | 39 |
neural cell | 4.57e-08 | 43 |
ectodermal cell | 9.30e-08 | 44 |
neurectodermal cell | 9.30e-08 | 44 |